g.barbadense_cottongen_reftransV1_0098081, g.barbadense_cottongen_reftransV1_0098081 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy Swiss-Prot
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4) HSP 1 Score: 124.79 bits (312), Expect = 3.253e-29 Identity = 81/175 (46.29%), Postives = 111/175 (63.43%), Query Frame = 2 Query: 47 TDTSSDLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 T+ S++Q YGVP Y A W+P ++SK+ + ED E + ++ + +VL+GGGGEGRSGI N I++ V+ +NSLS+QP+ + GSDLPYRM VHP G+ICA SC+LF W++ E ++ G SE+V+ +L DVGQQLAL FN EGSVLA G E Sbjct: 8 TNQPSNMQTYGVPIYAADWIPEVDVRSKIIMDPEKSEDDDESSSSS-------SSSRSCIVLSGGGGEGRSGISNVILICRVDLNTNSLSEQPLGRLVVGSDLPYRMAVHPREGGLICALPNSCKLFHWEDIMSREDNQAG--ESEEVIKELRDVGQQLALAFNPEGSVLAAGAE 173 HSP 2 Score: 92.4337 bits (228), Expect = 1.085e-18 Identity = 43/65 (66.15%), Postives = 52/65 (80.00%), Query Frame = 3 Query: 1536 AAVQDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGSGLCRIWDVTSSKVVASLAK 1730 A +DG+LRVFKWPSM +LNE+QAHSSVK L FS G+FLVSLG +CR+WDV +S VASL+K Sbjct: 170 AGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSLGGPVCRVWDVNASAAVASLSK 234
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy Swiss-Prot
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=1 SV=2) HSP 1 Score: 55.8398 bits (133), Expect = 7.581e-7 Identity = 22/62 (35.48%), Postives = 41/62 (66.13%), Query Frame = 3 Query: 1548 DGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGS-GLCRIWDVTSSKVVASLAK 1730 DG LR+ +WP++ ++L+E +AH S++++DFS D +FL + + G RIW +++L + Sbjct: 143 DGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIWKAEDGFPLSTLER 204
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: A0A072UYE3_MEDTR (SEC12p-like protein OS=Medicago truncatula GN=MTR_4g084650 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 2.640e-44 Identity = 84/172 (48.84%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 62 DLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQ--QSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 +L+KYGVP Y W+P + +KS + + D S + E Y+V AGGGG+ RSGIPN+++++H + S+SLSD PV K T S+LPYRM +HP+G+GIICA + + CR F+W ++E E+HKLG+KVSEK+L QL++VGQQLAL FN++G+ LA GGE Sbjct: 11 NLKKYGVPLYSVAWIPQSILKSLQNVTTDDDHSSDDAADHKSSPETEAVDAGKYLVFAGGGGDSRSGIPNSVLLAHFDVVSDSLSDPPVFKLGTNSELPYRMALHPNGEGIICAMEKPKCCRWFDWDQNEDAEIHKLGLKVSEKLLTQLDNVGQQLALAFNNDGTTLAAGGE 182 HSP 2 Score: 89.7373 bits (221), Expect = 6.347e-16 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 1536 AAVQDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSL-GSGLCRIWDVTSSKVVASLAKGN 1736 A +DGSLRVFKWPSM+ +LNE+ AHS+VK+L FS DGK +VSL G G CR+WDV+S+ V+A+LA N Sbjct: 179 AGGEDGSLRVFKWPSMENILNESNAHSTVKDLHFSSDGKLIVSLGGGGPCRVWDVSSAIVLATLANEN 246
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: B9HJB9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s12930g PE=4 SV=2) HSP 1 Score: 173.711 bits (439), Expect = 3.532e-44 Identity = 103/171 (60.23%), Postives = 122/171 (71.35%), Query Frame = 2 Query: 65 LQKYGVPFYGAGWVP--YNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 LQKYGVP Y A W+P + H + Q + ++D +E + S+ + YV+LAGGGGEGRSGIPNA+++S +F+SNSLS QPV K GSDLPYRM VHP GDG+ICA SCR FEW E E NE HKLG+K SEKVL QLEDVGQQLAL FNS+ SVLAVGGE Sbjct: 12 LQKYGVPLYSAAWLPLQFRHEDHDSSKQHEQDKDTEEMTHASASSYEY------YVILAGGGGEGRSGIPNAVLLSRFDFSSNSLSPQPVPKLNLGSDLPYRMVVHPGGDGLICALPNSCRFFEWDEVEDNEDHKLGLKSSEKVLTQLEDVGQQLALVFNSDSSVLAVGGE 176 HSP 2 Score: 93.5893 bits (231), Expect = 4.668e-17 Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 1545 QDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGS-GLCRIWDVTSSKVVASLAKGN 1736 +DG+LRVFKWPSM+I+ NEAQAH+S+K+L FS DGKFLVSLG G R+WDVTSS VASL+K N Sbjct: 176 EDGNLRVFKWPSMEIIFNEAQAHASLKDLCFSPDGKFLVSLGGRGPGRVWDVTSSMAVASLSKEN 240
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: A0A072UND0_MEDTR (SEC12p-like protein OS=Medicago truncatula GN=MTR_4g084650 PE=4 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 5.387e-44 Identity = 84/172 (48.84%), Postives = 118/172 (68.60%), Query Frame = 2 Query: 62 DLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQ--QSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 +L+KYGVP Y W+P + +KS + + D S + E Y+V AGGGG+ RSGIPN+++++H + S+SLSD PV K T S+LPYRM +HP+G+GIICA + + CR F+W ++E E+HKLG+KVSEK+L QL++VGQQLAL FN++G+ LA GGE Sbjct: 11 NLKKYGVPLYSVAWIPQSILKSLQNVTTDDDHSSDDAADHKSSPETEAVDAGKYLVFAGGGGDSRSGIPNSVLLAHFDVVSDSLSDPPVFKLGTNSELPYRMALHPNGEGIICAMEKPKCCRWFDWDQNEDAEIHKLGLKVSEKLLTQLDNVGQQLALAFNNDGTTLAAGGE 182 HSP 2 Score: 89.7373 bits (221), Expect = 8.317e-16 Identity = 43/68 (63.24%), Postives = 55/68 (80.88%), Query Frame = 3 Query: 1536 AAVQDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSL-GSGLCRIWDVTSSKVVASLAKGN 1736 A +DGSLRVFKWPSM+ +LNE+ AHS+VK+L FS DGK +VSL G G CR+WDV+S+ V+A+LA N Sbjct: 179 AGGEDGSLRVFKWPSMENILNESNAHSTVKDLHFSSDGKLIVSLGGGGPCRVWDVSSAIVLATLANEN 246
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: W9QTE8_9ROSA (SEC12-like protein 2 OS=Morus notabilis GN=L484_022925 PE=4 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 1.469e-41 Identity = 100/169 (59.17%), Postives = 117/169 (69.23%), Query Frame = 2 Query: 59 SDLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVG 565 S+ +KYGVPFY WVPY I+ S+E +ED+ + NDD NYVVLAGGGGEGRSGIPNA+V+S + SNSLSD PVVKH TGSDLPYRM HP G+G+IC+F + CR FEW +E HKLG+K SEK L L+DV QQLAL FN EGSVLA G Sbjct: 78 SNFRKYGVPFYAVAWVPYKSIRFDFKSEEDQKEDQPD------RNDDR-----NYVVLAGGGGEGRSGIPNAVVLSEFDLASNSLSDLPVVKHGTGSDLPYRMAGHPRGEGLICSFPKFCRWFEWDGERSSEGHKLGIKQSEKELNLLQDVEQQLALEFNDEGSVLASG 235 HSP 2 Score: 112.079 bits (279), Expect = 7.619e-23 Identity = 51/67 (76.12%), Postives = 61/67 (91.04%), Query Frame = 3 Query: 1536 AAVQDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGSGLCRIWDVTSSKVVASLAKGN 1736 + VQ+G+L+VFKWPSM+I+LNEAQAH+SVK+LDFS DGK LVSLG+G CR+WDVTSSK VASL KGN Sbjct: 234 SGVQNGNLKVFKWPSMEIILNEAQAHASVKDLDFSPDGKLLVSLGNGGCRVWDVTSSKAVASLPKGN 300
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: M1A6I7_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400006156 PE=4 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.445e-41 Identity = 96/186 (51.61%), Postives = 123/186 (66.13%), Query Frame = 2 Query: 44 MTDTSSDLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXPTPSNDDEI--------TTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGEVE 577 M D S++ + YGVP YGAGWVP N ++S + PS DDE + P NYVVL+GGGGEG GI NA++V+ ++ SN LSD+PV + TG DLPYRM VHP G+G+IC+ +SCR F+W + + E LG++ SEKVL LEDVGQQLALTFN+EGS+LAVGGEV+ Sbjct: 1 MAD-SANSKNYGVPIYGAGWVPPNALRSAV----------------EPSADDEKDDGDKSSPSAPGNYVVLSGGGGEGNIGIRNALIVAQFDYDSNVLSDEPVARLGTGGDLPYRMAVHPGGEGLICSLPKSCRWFDW-DFQTTENRSLGLRSSEKVLEPLEDVGQQLALTFNNEGSLLAVGGEVD 168
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: I1KM58_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.869e-41 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 2 Query: 62 DLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXP-TPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQ--QSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 + +KYGVPFY W+P + +KS+ D P T + + T NY++ AGGGG G SGIPNA+V++H + SNSLSDQPV K T S+LPYRM ++ +GDG+ICA + CR F+W +++ +E+HKL +K+SEKVL QLEDVGQQLAL FN++G+ LA GGE Sbjct: 11 NFKKYGVPFYSVAWIPQHVVKSRQIETADESSDSDHSTSPATEAEKEPATVAGNYLLFAGGGGAGHSGIPNALVIAHFDVASNSLSDQPVCKLGTDSELPYRMALNSNGDGLICAMETPMVCRWFDWDQNKSSEIHKLSLKLSEKVLSQLEDVGQQLALAFNNDGTALAAGGE 183 HSP 2 Score: 79.7221 bits (195), Expect = 1.487e-12 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 1536 AAVQDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGS-GLCRIWD 1694 A +DG+LRVFKWPSM+I+LNE AHSS+K+L FS DGK L SLGS G C++WD Sbjct: 180 AGGEDGNLRVFKWPSMEIILNETNAHSSLKDLHFSSDGKLLASLGSGGPCKVWD 233
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: A0A0B2S8J7_GLYSO (SEC12-like protein 2 OS=Glycine soja GN=glysoja_007546 PE=4 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.869e-41 Identity = 87/173 (50.29%), Postives = 118/173 (68.21%), Query Frame = 2 Query: 62 DLQKYGVPFYGAGWVPYNHIKSKLASQXXXXXXXXXXXXP-TPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQ--QSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 + +KYGVPFY W+P + +KS+ D P T + + T NY++ AGGGG G SGIPNA+V++H + SNSLSDQPV K T S+LPYRM ++ +GDG+ICA + CR F+W +++ +E+HKL +K+SEKVL QLEDVGQQLAL FN++G+ LA GGE Sbjct: 11 NFKKYGVPFYSVAWIPQHVVKSRQIETADESSDSDHSTSPATEAEKEPATVAGNYLLFAGGGGAGHSGIPNALVIAHFDVASNSLSDQPVCKLGTDSELPYRMALNSNGDGLICAMETPMVCRWFDWDQNKSSEIHKLSLKLSEKVLSQLEDVGQQLALAFNNDGTALAAGGE 183 HSP 2 Score: 79.7221 bits (195), Expect = 1.487e-12 Identity = 36/54 (66.67%), Postives = 44/54 (81.48%), Query Frame = 3 Query: 1536 AAVQDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGS-GLCRIWD 1694 A +DG+LRVFKWPSM+I+LNE AHSS+K+L FS DGK L SLGS G C++WD Sbjct: 180 AGGEDGNLRVFKWPSMEIILNETNAHSSLKDLHFSSDGKLLASLGSGGPCKVWD 233
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: A0A067L0P1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04703 PE=4 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 7.310e-41 Identity = 98/174 (56.32%), Postives = 118/174 (67.82%), Query Frame = 2 Query: 65 LQKYGVPFYGAGWVPYNHIKSKLASQXXXXXX-----XXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 LQKYG P Y A WVP ++SKL SQ+ + D EE P P++ I YVVL GGGGEGRSGIPNAIV++ +F +N+LS QPV K GSD+PYRM VHP GDG+ICA +SCR F+W E + N+ KL +K S KVL QLED+G QLAL FNS+ S LAVGGE Sbjct: 12 LQKYGFPLYSAAWVPLREVRSKLQSQDHQQSDGKDKDSSEESTPPPADQQAIADEY-YVVLTGGGGEGRSGIPNAIVLARFDFATNTLSAQPVAKLGLGSDVPYRMVVHPAGDGLICALPKSCRYFDWIEVKDNDNLKLDLKESGKVLNQLEDIGMQLALAFNSDSSALAVGGE 184 HSP 2 Score: 78.9518 bits (193), Expect = 2.835e-12 Identity = 38/63 (60.32%), Postives = 49/63 (77.78%), Query Frame = 3 Query: 1545 QDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGSGLC-RIWDVTSSKVVASLAK 1730 +DG LRVFKWP+M+I+L E +AH S+K+L FS DG FLVSLG R+WD+TSS VASL++ Sbjct: 184 EDGILRVFKWPNMEIILEETEAHPSLKDLCFSPDGNFLVSLGGRRPGRVWDLTSSTAVASLSR 246
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: A5BL08_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_036876 PE=4 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 2.307e-39 Identity = 92/171 (53.80%), Postives = 118/171 (69.01%), Query Frame = 2 Query: 68 QKYGVPFYGAGWVP---YNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 +KYGVP YGA W P N L +++ +E E P+P+ Y+V GGGGEGRSGIPNA++++ +F SNSLSD PV K G+DLPYRM VHP G+G+IC+ +SC+ F+W E + EVHK G+K+SEKVL LEDVGQQLALTFN++GS+LAVGGE Sbjct: 13 KKYGVPLYGAAWAPSTIINDAPQPLDQKQEADEVSGEGSTPSPAAP-------TYLVFCGGGGEGRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQWDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLAVGGE 176 HSP 2 Score: 93.5893 bits (231), Expect = 2.871e-17 Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 1545 QDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGS-GLCRIWDVTSSKVVASLAKGN 1736 +DG+LRVFKWPSM+ VL+EAQAH++VK+ DFS DGKFLVSLGS G R+WD+TSS +ASL K N Sbjct: 176 EDGNLRVFKWPSMENVLSEAQAHATVKDFDFSPDGKFLVSLGSGGPGRVWDLTSSTAIASLPKEN 240
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Match: F6HFH8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g04970 PE=4 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 3.059e-39 Identity = 92/173 (53.18%), Postives = 119/173 (68.79%), Query Frame = 2 Query: 62 DLQKYGVPFYGAGWVP---YNHIKSKLASQXXXXXXXXXXXXPTPSNDDEITTPLNYVVLAGGGGEGRSGIPNAIVVSHVNFTSNSLSDQPVVKHETGSDLPYRMTVHPHGDGIICAFQQSCRLFEWKESEGNEVHKLGVKVSEKVLIQLEDVGQQLALTFNSEGSVLAVGGE 571 + +KYGVP YGA W P N L +++ +E E P+P+ Y+V GGGGEGRSGIPNA++++ +F SNSLSD PV K G+DLPYRM VHP G+G+IC+ +SC+ F+W E + EVHK G+K+SEKVL LEDVGQQLALTFN++GS+LAVGGE Sbjct: 11 NYKKYGVPLYGAAWAPSTIINDAPQPLDQKQEADEVSGEGSTPSPAAP-------TYLVFCGGGGEGRSGIPNALLLAEFDFASNSLSDMPVFKLGIGADLPYRMAVHPGGEGLICSLPKSCKWFQWDEIKTEEVHKQGLKLSEKVLTHLEDVGQQLALTFNNDGSMLAVGGE 176 HSP 2 Score: 93.2041 bits (230), Expect = 5.320e-17 Identity = 45/65 (69.23%), Postives = 55/65 (84.62%), Query Frame = 3 Query: 1545 QDGSLRVFKWPSMKIVLNEAQAHSSVKNLDFSCDGKFLVSLGS-GLCRIWDVTSSKVVASLAKGN 1736 +DG+LRVFKWPSM+ VL+EAQAH++VK+ DFS DGKFLVSLGS G R+WD+TSS +ASL K N Sbjct: 176 EDGNLRVFKWPSMENVLSEAQAHATVKDFDFSPDGKFLVSLGSGGPGRVWDLTSSTAIASLPKEN 240 HSP 3 Score: 65.855 bits (159), Expect = 4.781e-8 Identity = 30/41 (73.17%), Postives = 33/41 (80.49%), Query Frame = 3 Query: 2052 DEVFAFCRFSQINDKNPHLYIAAVTDYGGSILTYNTTTWKR 2174 DEVFAFCRFSQ N KN LYIAAV D G I+T+NTTTWK+ Sbjct: 241 DEVFAFCRFSQTNVKNQVLYIAAVRDRGACIVTWNTTTWKK 281 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 2
BLAST of g.barbadense_cottongen_reftransV1_0098081 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0098081 ID=g.barbadense_cottongen_reftransV1_0098081; Name=g.barbadense_cottongen_reftransV1_0098081; organism=Gossypium barbadense; type=contig; length=2176bpback to top |