g.barbadense_cottongen_reftransV1_0097479, g.barbadense_cottongen_reftransV1_0097479 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: GBF3_ARATH (G-box-binding factor 3 OS=Arabidopsis thaliana GN=GBF3 PE=1 SV=2) HSP 1 Score: 142.124 bits (357), Expect = 3.939e-35 Identity = 80/136 (58.82%), Postives = 96/136 (70.59%), Query Frame = -1 Query: 523 VMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQ------------LGHTQENITNKNEDKEGEMYEKKSGAKLHQLLDASPRTDA 894 ++PPE W+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVE+LTAEN LRSE+NQL EKS+KLR NATL++ LK ++ + ++ NKN+ + S +KLHQLLD PR A Sbjct: 247 MVPPETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEALTAENMALRSELNQLNEKSDKLRGANATLLDKLKCSEPEKRVPANMLSRVKNSGAGDKNKNQGDN----DSNSTSKLHQLLDTKPRAKA 378 HSP 2 Score: 76.2554 bits (186), Expect = 2.237e-13 Identity = 56/80 (70.00%), Postives = 62/80 (77.50%), Query Frame = -2 Query: 1914 PTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSH-GGVYAHPAVPIVSL 2150 P DQ N+HVYPDWAAMQAYYGPRV MPPYYNSA+A+ PPP PQ MM PYGAPYA +Y H GGVYAHP +P+ SL Sbjct: 21 PVDQTNVHVYPDWAAMQAYYGPRVAMPPYYNSAMAASGHPPPPYMWNPQHMMSPYGAPYAAVYPHGGGVYAHPGIPMGSL 100
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: CPRF1_PETCR (Common plant regulatory factor 1 OS=Petroselinum crispum GN=CPRF1 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 7.041e-35 Identity = 92/176 (52.27%), Postives = 111/176 (63.07%), Query Frame = -1 Query: 523 SSMNAKSSP----TNVPCG------VMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQE-NITNKNEDK----------------------EGE--MYEK--KSGAKLHQLLDASPRTDA 939 SS+ K SP N P G +MP + W+ N+R+LKRERRKQSNRESARRSRLRKQAE EELA KV+SLTAEN L++EIN+LT +EKL +N+ L+E +KNAQ + + N NE K EGE +YEK KSGAKLHQLLDA+PRTDA Sbjct: 232 SSLELKDSPKEHAVNSPAGGQQPSTMMPNDSWLHNDRDLKRERRKQSNRESARRSRLRKQAEAEELAIKVDSLTAENMALKAEINRLTLTAEKLTNDNSRLLEVMKNAQAERAADVGLGNNNEKKASTLSTANLLSRVDNAGSGDRDEGESDVYEKTTKSGAKLHQLLDANPRTDA 407 HSP 2 Score: 76.2554 bits (186), Expect = 3.035e-13 Identity = 58/76 (76.32%), Postives = 67/76 (88.16%), Query Frame = -2 Query: 1917 DQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2144 DQ+N HVYPDWAAMQAYYGPRV +PPY+N AVASG +P PYMWGPPQP+MPPYG PYA +Y+HGGVYAHP VP+ + Sbjct: 25 DQSNSHVYPDWAAMQAYYGPRVALPPYFNPAVASGQSPHPYMWGPPQPVMPPYGVPYAALYAHGGVYAHPGVPLAA 100
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: TAF1_TOBAC (Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum GN=TAF1 PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.314e-33 Identity = 81/152 (53.29%), Postives = 98/152 (64.47%), Query Frame = -1 Query: 652 SDFSSYLDLCH---DIVDSAEXXXXXXXXXXXXXGLEMVKLRQSLMQLPWQRNPSSMNAKSSPTNVP--CGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLK 1092 D S+L C +I D +E + L S+ RNP+S + K+SPTNV +P E W+QNERELKRE+RKQSNRESARRSRLRKQAE EELA +V+SLTAEN TL+SEIN+L E SEKL+LENA L+E LK Sbjct: 111 GDSKSHLRRCQPTGEINDDSEKAIVAVRPGKVGEKVMGTVLSPSMTTTLEMRNPASTHLKASPTNVSQLSPALPNEAWLQNERELKREKRKQSNRESARRSRLRKQAEAEELAIRVQSLTAENMTLKSEINKLMENSEKLKLENAALMERLK 262
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: GBF2_ARATH (G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.323e-26 Identity = 69/122 (56.56%), Postives = 90/122 (73.77%), Query Frame = -1 Query: 526 PEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKKSGAKL--HQLLDASPRTD 885 P+ W NE+E+KRE+RKQSNRESARRSRLRKQAETE+L+ KV++L AEN +LRS++ QL +SEKLRLEN +++ LK G T EN+ ++ DK + SG+K HQLL+ASP TD Sbjct: 242 PQPW--NEKEVKREKRKQSNRESARRSRLRKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEKLRLENEAILDQLKAQATGKT-ENLISR-VDKNNSV----SGSKTVQHQLLNASPITD 355 HSP 2 Score: 55.8398 bits (133), Expect = 7.203e-7 Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = -2 Query: 2037 DQANIHVYP-DWAAMQAYYGPRVTMPPYYNSAVASGH 2144 +Q+N+HVY DWAAMQAYYGPRV +P YYNS +A GH Sbjct: 23 EQSNVHVYHHDWAAMQAYYGPRVGIPQYYNSNLAPGH 59
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: EMBP1_WHEAT (DNA-binding protein EMBP-1 OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 3.803e-17 Identity = 46/68 (67.65%), Postives = 54/68 (79.41%), Query Frame = -1 Query: 664 NERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLV 867 +ERELKRERRKQSNRESARRSRLRKQ E EELA+KV LTA N TLRSE++QL + + + EN L+ Sbjct: 247 DERELKRERRKQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENKKLM 314
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: GBF1_ARATH (G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 1.710e-16 Identity = 43/76 (56.58%), Postives = 63/76 (82.89%), Query Frame = -1 Query: 652 VWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLK 879 V +++ERELKR++RKQSNRESARRSRLRKQAE E+L ++VESL+ EN +LR E+ +L+ + +KL+ EN ++ + L+ Sbjct: 215 VPVKDERELKRQKRKQSNRESARRSRLRKQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDELQ 290
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: HBP1A_WHEAT (Transcription factor HBP-1a OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 3.657e-14 Identity = 49/112 (43.75%), Postives = 74/112 (66.07%), Query Frame = -1 Query: 577 VPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNE--DKEGEMYEK 906 VP G E W +ERELK+++RK SNRESARRSRLRKQAE EEL ++ E+L +EN++LR E++++ ++ E+L +N +L L + G + + + NE D G ++K Sbjct: 238 VPSGSARGEQW--DERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKNTSLKAKLGESGGGGGSDAVPDMNERGDTNGGSHQK 347
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Match: CPRF3_PETCR (Light-inducible protein CPRF3 OS=Petroselinum crispum GN=CPRF3 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.255e-13 Identity = 44/102 (43.14%), Postives = 69/102 (67.65%), Query Frame = -1 Query: 655 SSMNAKSSPTNV--PCGV-----MPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGL 939 S+ +S+P +V P + M P+ + +ERELKR+RRKQSNRESARRSRLRKQA+++EL ++++L+ EN LR + +++E ++ EN ++ E L Sbjct: 162 GSLEVRSNPLDVAAPGAIVVHDGMLPDQRVNDERELKRQRRKQSNRESARRSRLRKQAKSDELQERLDNLSKENRILRKNLQRISEACAEVTSENHSIKEEL 263
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2SHR8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105100 PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 5.574e-63 Identity = 119/144 (82.64%), Postives = 124/144 (86.11%), Query Frame = -1 Query: 523 RNPSSMNAKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 948 RN +MNA SS V CGVMP EVW+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLT+ENA LRSEINQLTE SEK+RLENA LVE LKNAQLGH QENI NK EDKEGEM EK+ SGAKLHQLLD SPR DA Sbjct: 233 RNTPTMNAMSSAMGVHCGVMPTEVWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLENAILVEELKNAQLGHAQENILNKKEDKEGEMGEKRSDSGAKLHQLLDPSPRDDA 376 HSP 2 Score: 84.7297 bits (208), Expect = 3.396e-14 Identity = 68/79 (86.08%), Postives = 71/79 (89.87%), Query Frame = -2 Query: 1917 VPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2153 VPT+ NIHVYPDWAAMQAYYGP V MPPYY+SAVASGHAPPPYMWGP QPMMP YGAPYA IYSHGGVYAHPAVP+ S Sbjct: 19 VPTN--NIHVYPDWAAMQAYYGPHVNMPPYYSSAVASGHAPPPYMWGPTQPMMPSYGAPYAAIYSHGGVYAHPAVPLAS 95 HSP 3 Score: 77.7962 bits (190), Expect = 5.426e-12 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = -3 Query: 1175 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQRF 1330 A PVETPTKS GNTE+G KK+KGFDGLA+SIGNGTAEN EG A+PR S Sbjct: 107 AGPVETPTKSPGNTEQGLMKKLKGFDGLAISIGNGTAENAEGRAKPRPSHSL 158
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2TCS7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105100 PE=4 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 5.996e-63 Identity = 119/144 (82.64%), Postives = 124/144 (86.11%), Query Frame = -1 Query: 523 RNPSSMNAKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 948 RN +MNA SS V CGVMP EVW+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLT+ENA LRSEINQLTE SEK+RLENA LVE LKNAQLGH QENI NK EDKEGEM EK+ SGAKLHQLLD SPR DA Sbjct: 235 RNTPTMNAMSSAMGVHCGVMPTEVWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLENAILVEELKNAQLGHAQENILNKKEDKEGEMGEKRSDSGAKLHQLLDPSPRDDA 378 HSP 2 Score: 92.8189 bits (229), Expect = 5.834e-17 Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = -2 Query: 1917 VPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2153 VPTDQ NIHVYPDWAAMQAYYGP V MPPYY+SAVASGHAPPPYMWGP QPMMP YGAPYA IYSHGGVYAHPAVP+ S Sbjct: 19 VPTDQNNIHVYPDWAAMQAYYGPHVNMPPYYSSAVASGHAPPPYMWGPTQPMMPSYGAPYAAIYSHGGVYAHPAVPLAS 97 HSP 3 Score: 77.7962 bits (190), Expect = 5.676e-12 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = -3 Query: 1175 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQRF 1330 A PVETPTKS GNTE+G KK+KGFDGLA+SIGNGTAEN EG A+PR S Sbjct: 109 AGPVETPTKSPGNTEQGLMKKLKGFDGLAISIGNGTAENAEGRAKPRPSHSL 160
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2QQB8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105100 PE=4 SV=1) HSP 1 Score: 226.483 bits (576), Expect = 6.156e-63 Identity = 119/144 (82.64%), Postives = 124/144 (86.11%), Query Frame = -1 Query: 523 RNPSSMNAKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 948 RN +MNA SS V CGVMP EVW+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLT+ENA LRSEINQLTE SEK+RLENA LVE LKNAQLGH QENI NK EDKEGEM EK+ SGAKLHQLLD SPR DA Sbjct: 241 RNTPTMNAMSSAMGVHCGVMPTEVWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLENAILVEELKNAQLGHAQENILNKKEDKEGEMGEKRSDSGAKLHQLLDPSPRDDA 384 HSP 2 Score: 93.2041 bits (230), Expect = 5.455e-17 Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = -2 Query: 1917 VPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2153 VPTDQ NIHVYPDWAAMQAYYGP V MPPYY+SAVASGHAPPPYMWGP QPMMP YGAPYA IYSHGGVYAHPAVP+ S Sbjct: 19 VPTDQNNIHVYPDWAAMQAYYGPHVNMPPYYSSAVASGHAPPPYMWGPTQPMMPSYGAPYAAIYSHGGVYAHPAVPLAS 97 HSP 3 Score: 77.7962 bits (190), Expect = 6.902e-12 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = -3 Query: 1175 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQRF 1330 A PVETPTKS GNTE+G KK+KGFDGLA+SIGNGTAEN EG A+PR S Sbjct: 109 AGPVETPTKSPGNTEQGLMKKLKGFDGLAISIGNGTAENAEGRAKPRPSHSL 160
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2RE89_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G123200 PE=4 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 9.579e-62 Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = -1 Query: 523 AKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 927 AKSSPTNVP VM E+W+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAEN TLRSEINQLTEKSEKLRLENATLVEGLKN +LG+ ++ I NK DKEGEMYEKK SGAKLHQL D SPR DA Sbjct: 130 AKSSPTNVPR-VMTSEIWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENTTLRSEINQLTEKSEKLRLENATLVEGLKNGELGYAKDIIMNKKADKEGEMYEKKSNSGAKLHQLFDPSPRADA 265 HSP 2 Score: 68.5514 bits (166), Expect = 2.000e-9 Identity = 38/50 (76.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 1181 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQ 1330 AAP ETPTK SGNT G KK+KGFDGLAMSIGN TAEN E AEPR SQ Sbjct: 3 AAP-ETPTKFSGNTNGGLMKKLKGFDGLAMSIGNSTAENAESGAEPRPSQ 51
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0B0Q187_GOSAR (G-box-binding factor 3-like protein OS=Gossypium arboreum GN=F383_05305 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.274e-61 Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = -1 Query: 523 AKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 927 AKSSPTNVP VMP E+W+Q ERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAEN TLRSEINQLTEKSEKLRLENATLVEGLKN +LG+ ++ I NK DKEGEMYEKK SGAKLHQL D SPR DA Sbjct: 235 AKSSPTNVPR-VMPSEIWLQKERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENTTLRSEINQLTEKSEKLRLENATLVEGLKNGELGYAKDIIMNKKADKEGEMYEKKSNSGAKLHQLFDPSPRADA 370 HSP 2 Score: 86.6557 bits (213), Expect = 7.068e-15 Identity = 65/80 (81.25%), Postives = 67/80 (83.75%), Query Frame = -2 Query: 1917 PVPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2156 P P DQ NIHVYPDWAAMQAYY PRV MPPYYNSAVASGHAPPPYMWGP Q +MPPYG PYA IY HGGVY HP VP+ S Sbjct: 18 PAPPDQTNIHVYPDWAAMQAYYSPRVPMPPYYNSAVASGHAPPPYMWGPTQAIMPPYGTPYAAIYPHGGVYVHPTVPMGS 97 HSP 3 Score: 71.2478 bits (173), Expect = 7.052e-10 Identity = 39/50 (78.00%), Postives = 40/50 (80.00%), Query Frame = -3 Query: 1181 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQ 1330 AAP ETPTKSSGNT G KK+KGFDGLAMSIGN TAEN E AEPR SQ Sbjct: 108 AAP-ETPTKSSGNTNGGLMKKLKGFDGLAMSIGNSTAENAESGAEPRPSQ 156
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2PTN5_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G123200 PE=4 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.078e-60 Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = -1 Query: 523 AKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 927 AKSSPTNVP VM E+W+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAEN TLRSEINQLTEKSEKLRLENATLVEGLKN +LG+ ++ I NK DKEGEMYEKK SGAKLHQL D SPR DA Sbjct: 231 AKSSPTNVPR-VMTSEIWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENTTLRSEINQLTEKSEKLRLENATLVEGLKNGELGYAKDIIMNKKADKEGEMYEKKSNSGAKLHQLFDPSPRADA 366 HSP 2 Score: 90.8929 bits (224), Expect = 2.456e-16 Identity = 67/80 (83.75%), Postives = 69/80 (86.25%), Query Frame = -2 Query: 1917 PVPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2156 P P DQ NIHVYPDWAAMQAYYGPRV MPPYYNSAVASGHAPPPYMWGP Q +MPPYG PYATIY HGGVY HP VP+ S Sbjct: 14 PAPPDQTNIHVYPDWAAMQAYYGPRVPMPPYYNSAVASGHAPPPYMWGPTQAIMPPYGTPYATIYPHGGVYVHPTVPMGS 93 HSP 3 Score: 68.9366 bits (167), Expect = 4.426e-9 Identity = 38/50 (76.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 1181 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQ 1330 AAP ETPTK SGNT G KK+KGFDGLAMSIGN TAEN E AEPR SQ Sbjct: 104 AAP-ETPTKFSGNTNGGLMKKLKGFDGLAMSIGNSTAENAESGAEPRPSQ 152
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2U207_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G123200 PE=4 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.187e-60 Identity = 115/137 (83.94%), Postives = 121/137 (88.32%), Query Frame = -1 Query: 523 AKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 927 AKSSPTNVP VM E+W+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAEN TLRSEINQLTEKSEKLRLENATLVEGLKN +LG+ ++ I NK DKEGEMYEKK SGAKLHQL D SPR DA Sbjct: 232 AKSSPTNVPR-VMTSEIWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENTTLRSEINQLTEKSEKLRLENATLVEGLKNGELGYAKDIIMNKKADKEGEMYEKKSNSGAKLHQLFDPSPRADA 367 HSP 2 Score: 90.8929 bits (224), Expect = 2.370e-16 Identity = 67/80 (83.75%), Postives = 69/80 (86.25%), Query Frame = -2 Query: 1917 PVPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2156 P P DQ NIHVYPDWAAMQAYYGPRV MPPYYNSAVASGHAPPPYMWGP Q +MPPYG PYATIY HGGVY HP VP+ S Sbjct: 14 PAPPDQTNIHVYPDWAAMQAYYGPRVPMPPYYNSAVASGHAPPPYMWGPTQAIMPPYGTPYATIYPHGGVYVHPTVPMGS 93 HSP 3 Score: 68.9366 bits (167), Expect = 4.335e-9 Identity = 38/50 (76.00%), Postives = 39/50 (78.00%), Query Frame = -3 Query: 1181 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQ 1330 AAP ETPTK SGNT G KK+KGFDGLAMSIGN TAEN E AEPR SQ Sbjct: 104 AAP-ETPTKFSGNTNGGLMKKLKGFDGLAMSIGNSTAENAESGAEPRPSQ 152
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0B0NYG1_GOSAR (Common plant regulatory factor 1 OS=Gossypium arboreum GN=F383_22799 PE=4 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 1.101e-59 Identity = 116/143 (81.12%), Postives = 121/143 (84.62%), Query Frame = -1 Query: 526 RNPSSMNAKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTD 948 RN + NA SS V CGVMP EVW+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLT+ENA LRSEINQLTE SEK+RLENA LVE LKNAQLGH QEN+ NK EDKE EM EKK SGAKLHQLLD SPR D Sbjct: 234 RNTPNKNAMSSAMGVHCGVMPTEVWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLENAILVEELKNAQLGHGQENVLNKKEDKEDEMCEKKSDSGAKLHQLLDPSPRDD 376 HSP 2 Score: 97.4413 bits (241), Expect = 1.896e-18 Identity = 72/90 (80.00%), Postives = 77/90 (85.56%), Query Frame = -2 Query: 1887 PVPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVSLLCHYRLIAA 2156 PVPTDQ NIHVYPDWAAMQAYYGP V MPPYY+SAVASGHAPP YMWG QPMMPPYGAPYATIYSHGGV+AHPAVP+V + L+ A Sbjct: 18 PVPTDQNNIHVYPDWAAMQAYYGPHVNMPPYYSSAVASGHAPPAYMWGLTQPMMPPYGAPYATIYSHGGVFAHPAVPLVLDITSSILMQA 107 HSP 3 Score: 81.2629 bits (199), Expect = 4.224e-13 Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = -3 Query: 1181 NIVMQTAAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQ 1348 +I+MQ A PVETP KS GNTE+G KK+KGFDGLA+SIGNGTA+N EG A+PR S Sbjct: 102 SILMQAAGPVETPVKSPGNTEQGLMKKLKGFDGLAISIGNGTAKNAEGRAKPRPSH 157
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: A0A0D2P6U8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G105100 PE=4 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.782e-53 Identity = 109/144 (75.69%), Postives = 114/144 (79.17%), Query Frame = -1 Query: 523 RNPSSMNAKSSPTNVPCGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITNKNEDKEGEMYEKK--SGAKLHQLLDASPRTDA 948 RN +MNA SS V CGVMP EVW+QNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLT+ENA LRSEINQLTE SEK+RLENA LV ENI NK EDKEGEM EK+ SGAKLHQLLD SPR DA Sbjct: 235 RNTPTMNAMSSAMGVHCGVMPTEVWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTSENAALRSEINQLTEMSEKVRLENAILV------------ENILNKKEDKEGEMGEKRSDSGAKLHQLLDPSPRDDA 366 HSP 2 Score: 92.8189 bits (229), Expect = 5.341e-17 Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = -2 Query: 1917 VPTDQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPIVS 2153 VPTDQ NIHVYPDWAAMQAYYGP V MPPYY+SAVASGHAPPPYMWGP QPMMP YGAPYA IYSHGGVYAHPAVP+ S Sbjct: 19 VPTDQNNIHVYPDWAAMQAYYGPHVNMPPYYSSAVASGHAPPPYMWGPTQPMMPSYGAPYAAIYSHGGVYAHPAVPLAS 97 HSP 3 Score: 77.7962 bits (190), Expect = 5.268e-12 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = -3 Query: 1175 AAPVETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQRF 1330 A PVETPTKS GNTE+G KK+KGFDGLA+SIGNGTAEN EG A+PR S Sbjct: 109 AGPVETPTKSPGNTEQGLMKKLKGFDGLAISIGNGTAENAEGRAKPRPSHSL 160
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Match: V4TCX1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10020314mg PE=4 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 4.838e-49 Identity = 104/170 (61.18%), Postives = 122/170 (71.76%), Query Frame = -1 Query: 523 RNPSSMNAKSSPTNVP--CGVMPPEVWMQNERELKRERRKQSNRESARRSRLRKQAETEELARKVESLTAENATLRSEINQLTEKSEKLRLENATLVEGLKNAQLGHTQENITN------------------------KNEDKEGEMYEK--KSGAKLHQLLDASPRTDA 948 RN MN K+SPT+VP C V+PPE W+QNERELKRERRKQSNRESARRSRLRKQAE EEL+RKV+SL ENA+L+SEINQL+E SEKLR ENA L+E LK+AQLG+ QE + N +N ++ G ++EK SGAKLHQLLDASPRTDA Sbjct: 234 RNAPGMNVKASPTSVPQPCAVLPPETWIQNERELKRERRKQSNRESARRSRLRKQAEAEELSRKVDSLIDENASLKSEINQLSENSEKLRQENAALLEKLKSAQLGNKQEIVLNEDKRVTPVSTENLLSRVNNSGTVDRNMEEGGHLFEKNSNSGAKLHQLLDASPRTDA 403 HSP 2 Score: 78.9518 bits (193), Expect = 2.983e-12 Identity = 62/74 (83.78%), Postives = 66/74 (89.19%), Query Frame = -2 Query: 1923 DQANIHVYPDWAAMQAYYGPRVTMPPYYNSAVASGHXXXXXXXXXXXXXXXXXXXXXATIYSHGGVYAHPAVPI 2144 DQ NIH+Y DWAAMQAYYGPRV +PPYYNS +ASGHAP PYMWGP QPMMPPYGAPYA IYS GGVYAHPAVP+ Sbjct: 22 DQGNIHMYTDWAAMQAYYGPRVAIPPYYNSPIASGHAPQPYMWGPAQPMMPPYGAPYAAIYSTGGVYAHPAVPL 95 HSP 3 Score: 64.6994 bits (156), Expect = 9.969e-8 Identity = 35/64 (54.69%), Postives = 41/64 (64.06%), Query Frame = -3 Query: 1181 GNIVMQTAAPV-------ETPTKSSGNTERGSTKKMKGFDGLAMSIGNGTAENDEGAAEPRLSQ 1351 G + A P+ E PTKSSGN +RG KK+KG DGLAMSIGN +AE+ EG AE R SQ Sbjct: 85 GGVYAHPAVPLAVTPLNTEAPTKSSGNADRGLAKKLKGLDGLAMSIGNASAESAEGGAEQRPSQ 148 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 8
BLAST of g.barbadense_cottongen_reftransV1_0097479 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097479 ID=g.barbadense_cottongen_reftransV1_0097479; Name=g.barbadense_cottongen_reftransV1_0097479; organism=Gossypium barbadense; type=contig; length=2193bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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