g.barbadense_cottongen_reftransV1_0097367, g.barbadense_cottongen_reftransV1_0097367 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPCP (Chaperone protein DnaJ OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 9.558e-9 Identity = 34/69 (49.28%), Postives = 41/69 (59.42%), Query Frame = 3 Query: 810 GEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGA----FKLLLEAWSLLSDKARRFSYDQ 1004 G+ D+Y VLGV A ED I K Y KLA HPD N+ GA A FK EA+ +LSD +R +YDQ Sbjct: 2 GKRDYYEVLGVGKTASEDEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEMLSDAQKRAAYDQ 70
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_OCEIH (Chaperone protein DnaJ OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831) GN=dnaJ PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.847e-8 Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 3 Query: 810 GEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 G+ D+Y +LG+ A +D I K+Y KLA HPD NK A A FK + EA+ +LSD +R YDQ Sbjct: 2 GKRDYYEILGIDKSASQDEIKKNYRKLARKYHPDVNKEADAAEKFKEVKEAYEVLSDDQKRAQYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 4.010e-8 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLGV A +D I K Y KL+ HPD NK GA FK + EA+ +LSD+ +R +YDQ Sbjct: 5 DYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: JJJ2_CANGA (J protein JJJ2 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=JJJ2 PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.175e-8 Identity = 34/76 (44.74%), Postives = 45/76 (59.21%), Query Frame = 3 Query: 822 WYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFA-GAGAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHG 1046 +Y +LGV A + I K YMKLA LHPD+ K A FKL+++A S+L++ R YD+KL L G F HG Sbjct: 13 YYSILGVPTNASTNEIRKSYMKLAKKLHPDKTKSEHTAELFKLVVDAHSILNNDQLRAEYDKKLILEGRFELHQHG 88
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_HAMD5 (Chaperone protein DnaJ OS=Hamiltonella defensa subsp. Acyrthosiphon pisum (strain 5AT) GN=dnaJ PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.180e-8 Identity = 35/98 (35.71%), Postives = 50/98 (51.02%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGA-FKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTS-SNGFHNSYSVKN 1106 D+Y +LG+ A+E I Y +LA HPD NK A FK + EA+ +LSD+ +R +YDQ HG ++ + GFHNS + N Sbjct: 5 DYYEILGIAKNANEQDIKDAYKRLAKKYHPDRNKDKDAETKFKEMKEAYEVLSDQQKRAAYDQ------------HGHTAFEQSGMGGGFHNSSNFSN 90
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 6.333e-8 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLGV A +D I K Y KL+ HPD NK GA FK + EA+ +LSD+ +R +YDQ Sbjct: 5 DYYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_BACLD (Chaperone protein DnaJ OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / NBRC 12200 / NCIMB 9375 / NRRL NRS-1264 / Gibson 46) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 7.943e-8 Identity = 32/63 (50.79%), Postives = 38/63 (60.32%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLGV A +D I K Y KL+ HPD NK AGA FK + EA+ LSD +R YDQ Sbjct: 5 DYYEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_LISW6 (Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 9.172e-8 Identity = 31/63 (49.21%), Postives = 38/63 (60.32%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A D I K Y KL+ HPD NK AGA FK + EA+ +LSD +R YDQ Sbjct: 5 DYYEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAS1 (Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 9.314e-8 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLGV A +D I K Y KL+ HPD NK GA FK + EA+ +LSD+ +R +YDQ Sbjct: 5 DYYEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: JJJ2_ASHGO (J protein JJJ2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=JJJ2 PE=3 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 9.917e-8 Identity = 34/83 (40.96%), Postives = 50/83 (60.24%), Query Frame = 3 Query: 813 EVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGA-FKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSM 1058 E +Y +LG+ A E I K YM+LA LHPD++K A FK++ A S+L+DK +R YD++L +G T V + SS+ Sbjct: 10 ETTYYSLLGLPFGASELHIRKAYMRLARELHPDKSKSKEAAELFKVVAHAHSVLTDKEKRLKYDRQLIAKGLHTYVSNSSSSL 92
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A0D2PYM9_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G2068001 PE=4 SV=1) HSP 1 Score: 515.383 bits (1326), Expect = 1.583e-175 Identity = 248/266 (93.23%), Postives = 252/266 (94.74%), Query Frame = 3 Query: 720 MAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEK 1517 MAENLYP L GLPQLIVALDVYISADEKINGEVDWYRVLGVQPY+ EDTIWKHYMKLAFILHPD+NKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG TNVLHGKSSMATTSSNGFH SYSVKNSNIGDQHGATYSNSAPP STRTDTFWTT SSCKMQFKYSR CINLNLP LKT+FRRHSERSKTW IPREE FHFSHQVPSYLVTGQEGLKSCKG LKLDP ATPSELLQVFTEAQVVIMKRARE+VPFVDSKRSEEK Sbjct: 1 MAENLYPALDGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYSAEDTIWKHYMKLAFILHPDKNKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG-VTNVLHGKSSMATTSSNGFHYSYSVKNSNIGDQHGATYSNSAPPRSTRTDTFWTTYSSCKMQFKYSRPCINLNLPSLKTLFRRHSERSKTWVIPREELFHFSHQVPSYLVTGQEGLKSCKGSLKLDPVATPSELLQVFTEAQVVIMKRARENVPFVDSKRSEEK 265
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A0D2RJ38_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G2068001 PE=4 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 4.225e-123 Identity = 197/266 (74.06%), Postives = 202/266 (75.94%), Query Frame = 3 Query: 720 MAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEK 1517 MAENLYP L GLPQLIVALDVYISADEKINGEVDWYRVLGVQPY+ EDTIWKHYMKLAFILHPD+NKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG TNVLHGKSSMATTSSNGFH SYSVKNSNIGDQHGATYSNSAPP STRTDTFWTT SSC+ GLK+ CKG LKLDP ATPSELLQVFTEAQVVIMKRARE+VPFVDSKRSEEK Sbjct: 1 MAENLYPALDGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYSAEDTIWKHYMKLAFILHPDKNKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG-VTNVLHGKSSMATTSSNGFHYSYSVKNSNIGDQHGATYSNSAPPRSTRTDTFWTTYSSCQ--------------EGLKS---------------------------------------CKGSLKLDPVATPSELLQVFTEAQVVIMKRARENVPFVDSKRSEEK 212
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A0D2PMC9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G058400 PE=4 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 4.994e-75 Identity = 139/212 (65.57%), Postives = 162/212 (76.42%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGK-SSMATTSSNGFHNSYSVKN-SNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNLP 1250 M+ NK+ AIR KE+AEK DV GAKRF L A+NLYP L GL QL+ LDVYISAD+KINGEVDWYRVL VQP+ADEDTI KHY KLA +LHPD+NK GA GAFK+L EAW+LLSDK +R +YDQK NLRGS+TNV H K SS TT NGF +++ +N SN ++GATYS P S R DTFWTTC+SCKM F+YSR+ INLNLP Sbjct: 1 MECNKDEAIRAKELAEKKLAEMDVFGAKRFALKAQNLYPELDGLSQLLATLDVYISADKKINGEVDWYRVLAVQPFADEDTIRKHYRKLALVLHPDKNKSVGADGAFKILSEAWNLLSDKVKRIAYDQKRNLRGSYTNVSHVKPSSSTTTGRNGFSQNFTNENISNTSGRNGATYSKPT-PRSARIDTFWTTCNSCKMHFEYSRVYINLNLP 211 HSP 2 Score: 114.005 bits (284), Expect = 7.127e-23 Identity = 61/112 (54.46%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEKELVENDQEMKPNTTKEGVR 1574 + +PG KTVFR+H E+SKT IPREE F FSHQVPSYL TGQE L + KGCL+LDPAATP ELL+V TEAQV M+ E V + S + +E ++ KP G R Sbjct: 646 VKVPGFKTVFRKHFEQSKTRMIPREELFRFSHQVPSYLFTGQEALNTPKGCLELDPAATPLELLKVLTEAQVKEMEVMTETVQETKVE-SAGQAFIEENKNKKPQMLVYGRR 756
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A061G626_THECC (DNAJ heat shock N-terminal domain-containing protein, putative OS=Theobroma cacao GN=TCM_014652 PE=4 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 2.722e-70 Identity = 136/220 (61.82%), Postives = 160/220 (72.73%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGK-SSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNL--PGLKTVFR 1271 MD NK+ AIR KE+AE+ D AGAKRF L A+N+YP L GLPQL+ +DVYISAD KI+GEVD Y VLGVQP ADEDTI KH+ KLA ILHPD+NK GA GAF +L EAW+LLSDKA+R +YDQK NL S T+VL GK SS+A TS GFHN +N DQ+ ATYS APP S R DTFWTTC++C+M F+Y R+ +NLNL P T FR Sbjct: 1 MDSNKDEAIRAKELAEEKLREMDAAGAKRFALKAQNMYPELDGLPQLLATIDVYISADMKISGEVDCYSVLGVQPSADEDTIRKHFRKLALILHPDKNKSVGADGAFHILSEAWNLLSDKAKRIAYDQKRNLWCSHTSVLCGKSSSLAPTSHEGFHNF-----NNTSDQNNATYSRPAPPHSARNDTFWTTCNTCRMNFEYHRVYVNLNLTCPNCSTPFR 215 HSP 2 Score: 152.91 bits (385), Expect = 2.897e-35 Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIM----KRAREDVPFVDSKRSEEKELVENDQEMKPNTTKEGV 1571 + +PG KTVF++HS SKTW IPREE F FSHQVPSYL+TGQEG + GCL+LDPAATP ELLQV +EAQV+ M +R RE+ D KRS+EKELVENDQEMKPN EGV Sbjct: 626 VKVPGFKTVFQKHSMPSKTWMIPREELFRFSHQVPSYLLTGQEGHNAPNGCLELDPAATPLELLQVLSEAQVIEMEELTERGREETVLGDLKRSKEKELVENDQEMKPNIGVEGV 740
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: B9I3S3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s10060g PE=4 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 6.853e-56 Identity = 112/210 (53.33%), Postives = 146/210 (69.52%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPP-CSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NKE A R KEIAEK D+AGA+RF + A+NLYP L GLP+L+ ALDVY++AD + NG+VDWYRVL V+ AD+DTI +HY KLA ILHPD+NK GA GAFK++ EAW+LLSDK +R S+DQK N++G V + KSS+ NG + + KNSN Q A + APP ++ +TFWT C++CK QF+Y R +N NL Sbjct: 1 MEFNKEEASRVKEIAEKKFAERDIAGARRFAVKAQNLYPALDGLPRLLAALDVYMAADNRTNGDVDWYRVLDVESSADDDTIRRHYRKLALILHPDKNKATGADGAFKIVSEAWNLLSDKVKRISFDQKRNVKGMDQKVPNWKSSVP-AGQNGSRDLSNNKNSNARSQKSAVHPKPAPPHLFSKPNTFWTICNACKTQFEYLRTYLNHNL 209 HSP 2 Score: 105.531 bits (262), Expect = 3.537e-20 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIM----KRAREDVPFVDSKRSEEKELVENDQEMKPNTTKE 1565 + + G KTVFR+H + SKT IPREE F FSHQVPS L+TGQEG + KGC +LDPA+TP ELLQV T Q+ M ++ +E D K+S E+E VEN NT KE Sbjct: 599 VKVAGFKTVFRQHPDPSKTRTIPREEMFRFSHQVPSVLLTGQEGQYAPKGCWELDPASTPLELLQVLTGVQLDAMMETAEKDKEKYSSGDMKKSSEEEFVEN-----VNTVKE 706
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: F6HGB6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03770 PE=4 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 8.819e-54 Identity = 107/216 (49.54%), Postives = 142/216 (65.74%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLH---GKSSMATTSSNGFHNSYSVKNSNIGDQHGAT-YSNSAPPCST---RTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NK+ A R KEIAEK D+AGAK+ L A+NL+P L GLPQ+++ LDV+ISA+ KINGE DWY +LGV P AD+DT+ K Y KLA +LHPD+NK GA GAFKL+ EAWSLLSDK +R ++DQK N++ V G SS A ++NGF++ + +N AT S+ P S + +TF T C CKMQ++Y R+ +N NL Sbjct: 1 MECNKDEATRAKEIAEKKFIARDIAGAKKLALKAQNLFPGLNGLPQMLLTLDVHISAENKINGEADWYGILGVNPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKTKRIAFDQKRNVKAGQQKVQPPSGGPSSSA--AANGFYSFTKSRTTNTKAHKNATQMGPSSAPASAHKLKPNTFGTVCHRCKMQYEYLRIYLNHNL 214
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: B9IFC8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10950g PE=4 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.764e-53 Identity = 110/210 (52.38%), Postives = 137/210 (65.24%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSA-PPCSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NKE A R KEIAEK D+AGA+RF L A+ LYP L GLPQL+ LD +++AD + NGEVDWYRVL V+P A EDTI +HY KLA ILHPD+NK GA GAF ++ EAW+LLSDKA+R +YDQK N+ V H KSS+ T N NSN Q A A PP ++ +TFWT C++CK QF+Y R +N +L Sbjct: 1 MECNKEEAFRVKEIAEKKFIERDIAGARRFALKAQKLYPALDGLPQLLATLDAHMAADNRTNGEVDWYRVLDVEPSASEDTIRRHYRKLALILHPDKNKAVGAHGAFNIISEAWNLLSDKAKRIAYDQKRNVTDMDQKVPHWKSSVPTGHDN---------NSNARSQKNAMRPKPAPPPLFSKPNTFWTICNACKTQFEYLRTYLNHSL 201 HSP 2 Score: 99.3673 bits (246), Expect = 3.020e-18 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVV-IMKRARED 1481 + + G KTVFR+H + SKT IPREE F FSHQVPS L+TGQEG + KGC +LDPA+TP ELLQV +E Q+ +M+ A +D Sbjct: 598 VKVAGFKTVFRQHPDSSKTRTIPREEMFRFSHQVPSVLLTGQEGQNAPKGCWELDPASTPLELLQVLSEVQLDGMMETAEKD 679
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A067JRJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26441 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.304e-52 Identity = 112/210 (53.33%), Postives = 144/210 (68.57%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCS-TRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NKE A R KE+AEK D+AGAK+F + A+NL+P L GL Q LDVYISA+E+I+GEVDWY+VLGV+ A+E+T+ KHY KLA ILHPD+NK GA GAFK++ EAWSLLSDKA+R +YDQK NL + + + KS++ T NGFHN ++ NSN Q + PP ++ +TFWT C CK QF+Y R IN NL Sbjct: 4 MECNKEDAFRAKEMAEKKFIERDIAGAKKFAMKAQNLFPGLDGLSQFQATLDVYISAEERIDGEVDWYKVLGVEMSANEETVRKHYRKLALILHPDKNKSVGAEGAFKIVSEAWSLLSDKAKRSAYDQKRNLWDIYRKIPNYKSAIP-TGQNGFHNLFNNNNSNSTTQKNDMHPQPVPPSHFSKFNTFWTICLFCKTQFEYLRTYINHNL 212 HSP 2 Score: 96.6709 bits (239), Expect = 2.307e-17 Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDV--PFVDSKRSEEKELVENDQEMKPNTTKEGV 1571 + + G KTVF RHS+ KT IPREE F FSHQVPSYL+TGQEG + +GC +LDPA+ P ELL+V TE + + P D K++ E++L+EN + TTKE + Sbjct: 639 VKVAGFKTVFCRHSDSRKTKRIPREELFRFSHQVPSYLLTGQEGHNAPRGCWELDPASMPLELLRVLTEVEEKETVEHADKAKDPLGDVKKATEEQLIENGE-----TTKEKI 746
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: M5WDP4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015942mg PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.488e-52 Identity = 110/209 (52.63%), Postives = 138/209 (66.03%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NK+ A++ KE+AE D GAKRF L A+NLYP L G+ Q + LDVYISA+++ NGE+DWY+VLGV+P ADEDTI K Y KLA ILHPD+NK GA GAFK++ EAWSLLS+KA+R YDQKLN G SS+A T+ NGFHN +S N AT++ + TFWT C+SCKM F+Y R +N NL Sbjct: 1 MECNKDEALKAKEVAELKAGQIDFPGAKRFALKAQNLYPELDGISQFLATLDVYISAEKRANGEIDWYKVLGVEPLADEDTIRKQYRKLALILHPDKNKSVGADGAFKIVKEAWSLLSNKAQRILYDQKLNFNYMHDRAPDGNSSVA-TNQNGFHN-FSNYNHLNARMRSATHTKPFRTPYPQKPTFWTVCNSCKMHFEYLRAFLNHNL 207 HSP 2 Score: 98.2117 bits (243), Expect = 6.412e-18 Identity = 55/98 (56.12%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 1251 GLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRARE----DVPFVDSKRSEEKELVEN 1532 G KTVFR+H RSKT IPREE F FSHQVPS L+TG EG + K CL+LDPAATP ELLQV +EA M+ E + P K ++E+ LVEN Sbjct: 645 GFKTVFRQHLHRSKTRTIPREEMFRFSHQVPSVLLTGHEGPNAPKDCLELDPAATPLELLQVKSEAYKDEMEEIAETCNGEDPLGWLKSTKEEALVEN 742
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A067JEB4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25993 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 8.969e-52 Identity = 110/214 (51.40%), Postives = 145/214 (67.76%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEK-INGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNV-LHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYS--NSAP-PCSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NK+ A+R KEIAE+ D AGAK+F L A+NL+P L GL QL+V DVY SA++K I GEVDWY VLGV P+AD++T+ K Y KLA +LHPD+NK GA GAFKL+ EAWSLLSDK +R +Y++KLN+ G+ V K A T+ NGFH+S S NS+ Q+ T + S P P + +TFWT C+ CK Q++Y R+ +N L Sbjct: 1 MECNKDEAVRAKEIAERKFTERDYAGAKKFALKAQNLFPQLEGLSQLLVTFDVYASAEKKTITGEVDWYSVLGVNPWADDETVKKQYRKLALMLHPDKNKSLGADGAFKLVSEAWSLLSDKGKRLAYNEKLNVIGTQQRVSTQNKVPSAPTTVNGFHSSNSTVNSDARTQNKNTRAVPTSGPSPSHPKPETFWTICNRCKTQYEYLRIYLNHTL 214 HSP 2 Score: 90.5077 bits (223), Expect = 1.728e-15 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEKELVENDQEMKPNTTKEGVR 1574 + + G KTVF RH + ++ IP+E FSHQVP +L+TG+E + KGC +LDPAATP ELLQV TEAQ V R + V+ ++ E+VE K + KEG R Sbjct: 641 VKVAGFKTVFHRHMDPNEIRRIPKEAMLRFSHQVPDHLLTGEEAHNAPKGCRELDPAATPLELLQVITEAQTVETTRETVEEITVNFTETKVDEMVE-----KASNAKEGER 747 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097367 ID=g.barbadense_cottongen_reftransV1_0097367; Name=g.barbadense_cottongen_reftransV1_0097367; organism=Gossypium barbadense; type=contig; length=2195bpback to top |