g.barbadense_cottongen_reftransV1_0097367, g.barbadense_cottongen_reftransV1_0097367 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein DnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.057e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAW (Chaperone protein DnaJ OS=Staphylococcus aureus (strain MW2) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAT (Chaperone protein DnaJ OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAS (Chaperone protein DnaJ OS=Staphylococcus aureus (strain MSSA476) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAN (Chaperone protein DnaJ OS=Staphylococcus aureus (strain N315) GN=dnaJ PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAM (Chaperone protein DnaJ OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein DnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein DnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein DnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein DnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 1.104e-7 Identity = 31/63 (49.21%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 819 DWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAG-AFKLLLEAWSLLSDKARRFSYDQ 1004 D+Y VLG+ A +D I K Y KL+ HPD NK GA FK + EA+ +LSD +R SYDQ Sbjct: 5 DYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQ 67
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A0D2PYM9_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G2068001 PE=4 SV=1) HSP 1 Score: 515.383 bits (1326), Expect = 1.583e-175 Identity = 248/266 (93.23%), Postives = 252/266 (94.74%), Query Frame = 3 Query: 720 MAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEK 1517 MAENLYP L GLPQLIVALDVYISADEKINGEVDWYRVLGVQPY+ EDTIWKHYMKLAFILHPD+NKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG TNVLHGKSSMATTSSNGFH SYSVKNSNIGDQHGATYSNSAPP STRTDTFWTT SSCKMQFKYSR CINLNLP LKT+FRRHSERSKTW IPREE FHFSHQVPSYLVTGQEGLKSCKG LKLDP ATPSELLQVFTEAQVVIMKRARE+VPFVDSKRSEEK Sbjct: 1 MAENLYPALDGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYSAEDTIWKHYMKLAFILHPDKNKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG-VTNVLHGKSSMATTSSNGFHYSYSVKNSNIGDQHGATYSNSAPPRSTRTDTFWTTYSSCKMQFKYSRPCINLNLPSLKTLFRRHSERSKTWVIPREELFHFSHQVPSYLVTGQEGLKSCKGSLKLDPVATPSELLQVFTEAQVVIMKRARENVPFVDSKRSEEK 265
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A0D2RJ38_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_008G2068001 PE=4 SV=1) HSP 1 Score: 378.637 bits (971), Expect = 4.225e-123 Identity = 197/266 (74.06%), Postives = 202/266 (75.94%), Query Frame = 3 Query: 720 MAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEK 1517 MAENLYP L GLPQLIVALDVYISADEKINGEVDWYRVLGVQPY+ EDTIWKHYMKLAFILHPD+NKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG TNVLHGKSSMATTSSNGFH SYSVKNSNIGDQHGATYSNSAPP STRTDTFWTT SSC+ GLK+ CKG LKLDP ATPSELLQVFTEAQVVIMKRARE+VPFVDSKRSEEK Sbjct: 1 MAENLYPALDGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYSAEDTIWKHYMKLAFILHPDKNKFAGAGAFKLLLEAWSLLSDKARRFSYDQKLNLRG-VTNVLHGKSSMATTSSNGFHYSYSVKNSNIGDQHGATYSNSAPPRSTRTDTFWTTYSSCQ--------------EGLKS---------------------------------------CKGSLKLDPVATPSELLQVFTEAQVVIMKRARENVPFVDSKRSEEK 212
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A0D2PMC9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G058400 PE=4 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 4.994e-75 Identity = 139/212 (65.57%), Postives = 162/212 (76.42%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGK-SSMATTSSNGFHNSYSVKN-SNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNLP 1250 M+ NK+ AIR KE+AEK DV GAKRF L A+NLYP L GL QL+ LDVYISAD+KINGEVDWYRVL VQP+ADEDTI KHY KLA +LHPD+NK GA GAFK+L EAW+LLSDK +R +YDQK NLRGS+TNV H K SS TT NGF +++ +N SN ++GATYS P S R DTFWTTC+SCKM F+YSR+ INLNLP Sbjct: 1 MECNKDEAIRAKELAEKKLAEMDVFGAKRFALKAQNLYPELDGLSQLLATLDVYISADKKINGEVDWYRVLAVQPFADEDTIRKHYRKLALVLHPDKNKSVGADGAFKILSEAWNLLSDKVKRIAYDQKRNLRGSYTNVSHVKPSSSTTTGRNGFSQNFTNENISNTSGRNGATYSKPT-PRSARIDTFWTTCNSCKMHFEYSRVYINLNLP 211 HSP 2 Score: 114.005 bits (284), Expect = 7.127e-23 Identity = 61/112 (54.46%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEKELVENDQEMKPNTTKEGVR 1574 + +PG KTVFR+H E+SKT IPREE F FSHQVPSYL TGQE L + KGCL+LDPAATP ELL+V TEAQV M+ E V + S + +E ++ KP G R Sbjct: 646 VKVPGFKTVFRKHFEQSKTRMIPREELFRFSHQVPSYLFTGQEALNTPKGCLELDPAATPLELLKVLTEAQVKEMEVMTETVQETKVE-SAGQAFIEENKNKKPQMLVYGRR 756
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A061G626_THECC (DNAJ heat shock N-terminal domain-containing protein, putative OS=Theobroma cacao GN=TCM_014652 PE=4 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 2.722e-70 Identity = 136/220 (61.82%), Postives = 160/220 (72.73%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGK-SSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNL--PGLKTVFR 1271 MD NK+ AIR KE+AE+ D AGAKRF L A+N+YP L GLPQL+ +DVYISAD KI+GEVD Y VLGVQP ADEDTI KH+ KLA ILHPD+NK GA GAF +L EAW+LLSDKA+R +YDQK NL S T+VL GK SS+A TS GFHN +N DQ+ ATYS APP S R DTFWTTC++C+M F+Y R+ +NLNL P T FR Sbjct: 1 MDSNKDEAIRAKELAEEKLREMDAAGAKRFALKAQNMYPELDGLPQLLATIDVYISADMKISGEVDCYSVLGVQPSADEDTIRKHFRKLALILHPDKNKSVGADGAFHILSEAWNLLSDKAKRIAYDQKRNLWCSHTSVLCGKSSSLAPTSHEGFHNF-----NNTSDQNNATYSRPAPPHSARNDTFWTTCNTCRMNFEYHRVYVNLNLTCPNCSTPFR 215 HSP 2 Score: 152.91 bits (385), Expect = 2.897e-35 Identity = 76/115 (66.09%), Postives = 88/115 (76.52%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIM----KRAREDVPFVDSKRSEEKELVENDQEMKPNTTKEGV 1571 + +PG KTVF++HS SKTW IPREE F FSHQVPSYL+TGQEG + GCL+LDPAATP ELLQV +EAQV+ M +R RE+ D KRS+EKELVENDQEMKPN EGV Sbjct: 626 VKVPGFKTVFQKHSMPSKTWMIPREELFRFSHQVPSYLLTGQEGHNAPNGCLELDPAATPLELLQVLSEAQVIEMEELTERGREETVLGDLKRSKEKELVENDQEMKPNIGVEGV 740
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: B9I3S3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s10060g PE=4 SV=2) HSP 1 Score: 214.927 bits (546), Expect = 6.853e-56 Identity = 112/210 (53.33%), Postives = 146/210 (69.52%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPP-CSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NKE A R KEIAEK D+AGA+RF + A+NLYP L GLP+L+ ALDVY++AD + NG+VDWYRVL V+ AD+DTI +HY KLA ILHPD+NK GA GAFK++ EAW+LLSDK +R S+DQK N++G V + KSS+ NG + + KNSN Q A + APP ++ +TFWT C++CK QF+Y R +N NL Sbjct: 1 MEFNKEEASRVKEIAEKKFAERDIAGARRFAVKAQNLYPALDGLPRLLAALDVYMAADNRTNGDVDWYRVLDVESSADDDTIRRHYRKLALILHPDKNKATGADGAFKIVSEAWNLLSDKVKRISFDQKRNVKGMDQKVPNWKSSVP-AGQNGSRDLSNNKNSNARSQKSAVHPKPAPPHLFSKPNTFWTICNACKTQFEYLRTYLNHNL 209 HSP 2 Score: 105.531 bits (262), Expect = 3.537e-20 Identity = 59/113 (52.21%), Postives = 73/113 (64.60%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIM----KRAREDVPFVDSKRSEEKELVENDQEMKPNTTKE 1565 + + G KTVFR+H + SKT IPREE F FSHQVPS L+TGQEG + KGC +LDPA+TP ELLQV T Q+ M ++ +E D K+S E+E VEN NT KE Sbjct: 599 VKVAGFKTVFRQHPDPSKTRTIPREEMFRFSHQVPSVLLTGQEGQYAPKGCWELDPASTPLELLQVLTGVQLDAMMETAEKDKEKYSSGDMKKSSEEEFVEN-----VNTVKE 706
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: F6HGB6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0010g03770 PE=4 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 8.819e-54 Identity = 107/216 (49.54%), Postives = 142/216 (65.74%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLH---GKSSMATTSSNGFHNSYSVKNSNIGDQHGAT-YSNSAPPCST---RTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NK+ A R KEIAEK D+AGAK+ L A+NL+P L GLPQ+++ LDV+ISA+ KINGE DWY +LGV P AD+DT+ K Y KLA +LHPD+NK GA GAFKL+ EAWSLLSDK +R ++DQK N++ V G SS A ++NGF++ + +N AT S+ P S + +TF T C CKMQ++Y R+ +N NL Sbjct: 1 MECNKDEATRAKEIAEKKFIARDIAGAKKLALKAQNLFPGLNGLPQMLLTLDVHISAENKINGEADWYGILGVNPLADDDTVRKQYRKLALMLHPDKNKSIGADGAFKLISEAWSLLSDKTKRIAFDQKRNVKAGQQKVQPPSGGPSSSA--AANGFYSFTKSRTTNTKAHKNATQMGPSSAPASAHKLKPNTFGTVCHRCKMQYEYLRIYLNHNL 214
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: B9IFC8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10950g PE=4 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 1.764e-53 Identity = 110/210 (52.38%), Postives = 137/210 (65.24%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSA-PPCSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NKE A R KEIAEK D+AGA+RF L A+ LYP L GLPQL+ LD +++AD + NGEVDWYRVL V+P A EDTI +HY KLA ILHPD+NK GA GAF ++ EAW+LLSDKA+R +YDQK N+ V H KSS+ T N NSN Q A A PP ++ +TFWT C++CK QF+Y R +N +L Sbjct: 1 MECNKEEAFRVKEIAEKKFIERDIAGARRFALKAQKLYPALDGLPQLLATLDAHMAADNRTNGEVDWYRVLDVEPSASEDTIRRHYRKLALILHPDKNKAVGAHGAFNIISEAWNLLSDKAKRIAYDQKRNVTDMDQKVPHWKSSVPTGHDN---------NSNARSQKNAMRPKPAPPPLFSKPNTFWTICNACKTQFEYLRTYLNHSL 201 HSP 2 Score: 99.3673 bits (246), Expect = 3.020e-18 Identity = 48/82 (58.54%), Postives = 61/82 (74.39%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVV-IMKRARED 1481 + + G KTVFR+H + SKT IPREE F FSHQVPS L+TGQEG + KGC +LDPA+TP ELLQV +E Q+ +M+ A +D Sbjct: 598 VKVAGFKTVFRQHPDSSKTRTIPREEMFRFSHQVPSVLLTGQEGQNAPKGCWELDPASTPLELLQVLSEVQLDGMMETAEKD 679
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A067JRJ7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26441 PE=4 SV=1) HSP 1 Score: 204.912 bits (520), Expect = 1.304e-52 Identity = 112/210 (53.33%), Postives = 144/210 (68.57%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCS-TRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NKE A R KE+AEK D+AGAK+F + A+NL+P L GL Q LDVYISA+E+I+GEVDWY+VLGV+ A+E+T+ KHY KLA ILHPD+NK GA GAFK++ EAWSLLSDKA+R +YDQK NL + + + KS++ T NGFHN ++ NSN Q + PP ++ +TFWT C CK QF+Y R IN NL Sbjct: 4 MECNKEDAFRAKEMAEKKFIERDIAGAKKFAMKAQNLFPGLDGLSQFQATLDVYISAEERIDGEVDWYKVLGVEMSANEETVRKHYRKLALILHPDKNKSVGAEGAFKIVSEAWSLLSDKAKRSAYDQKRNLWDIYRKIPNYKSAIP-TGQNGFHNLFNNNNSNSTTQKNDMHPQPVPPSHFSKFNTFWTICLFCKTQFEYLRTYINHNL 212 HSP 2 Score: 96.6709 bits (239), Expect = 2.307e-17 Identity = 54/113 (47.79%), Postives = 72/113 (63.72%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDV--PFVDSKRSEEKELVENDQEMKPNTTKEGV 1571 + + G KTVF RHS+ KT IPREE F FSHQVPSYL+TGQEG + +GC +LDPA+ P ELL+V TE + + P D K++ E++L+EN + TTKE + Sbjct: 639 VKVAGFKTVFCRHSDSRKTKRIPREELFRFSHQVPSYLLTGQEGHNAPRGCWELDPASMPLELLRVLTEVEEKETVEHADKAKDPLGDVKKATEEQLIENGE-----TTKEKI 746
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: M5WDP4_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa015942mg PE=4 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 2.488e-52 Identity = 110/209 (52.63%), Postives = 138/209 (66.03%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEKINGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNVLHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYSNSAPPCSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NK+ A++ KE+AE D GAKRF L A+NLYP L G+ Q + LDVYISA+++ NGE+DWY+VLGV+P ADEDTI K Y KLA ILHPD+NK GA GAFK++ EAWSLLS+KA+R YDQKLN G SS+A T+ NGFHN +S N AT++ + TFWT C+SCKM F+Y R +N NL Sbjct: 1 MECNKDEALKAKEVAELKAGQIDFPGAKRFALKAQNLYPELDGISQFLATLDVYISAEKRANGEIDWYKVLGVEPLADEDTIRKQYRKLALILHPDKNKSVGADGAFKIVKEAWSLLSNKAQRILYDQKLNFNYMHDRAPDGNSSVA-TNQNGFHN-FSNYNHLNARMRSATHTKPFRTPYPQKPTFWTVCNSCKMHFEYLRAFLNHNL 207 HSP 2 Score: 98.2117 bits (243), Expect = 6.412e-18 Identity = 55/98 (56.12%), Postives = 65/98 (66.33%), Query Frame = 3 Query: 1251 GLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRARE----DVPFVDSKRSEEKELVEN 1532 G KTVFR+H RSKT IPREE F FSHQVPS L+TG EG + K CL+LDPAATP ELLQV +EA M+ E + P K ++E+ LVEN Sbjct: 645 GFKTVFRQHLHRSKTRTIPREEMFRFSHQVPSVLLTGHEGPNAPKDCLELDPAATPLELLQVKSEAYKDEMEEIAETCNGEDPLGWLKSTKEEALVEN 742
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Match: A0A067JEB4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25993 PE=4 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 8.969e-52 Identity = 110/214 (51.40%), Postives = 145/214 (67.76%), Query Frame = 3 Query: 639 MD*NKEVAIRGKEIAEK-----DVAGAKRFVLMAENLYPVLGGLPQLIVALDVYISADEK-INGEVDWYRVLGVQPYADEDTIWKHYMKLAFILHPDENKFAGA-GAFKLLLEAWSLLSDKARRFSYDQKLNLRGSFTNV-LHGKSSMATTSSNGFHNSYSVKNSNIGDQHGATYS--NSAP-PCSTRTDTFWTTCSSCKMQFKYSRLCINLNL 1247 M+ NK+ A+R KEIAE+ D AGAK+F L A+NL+P L GL QL+V DVY SA++K I GEVDWY VLGV P+AD++T+ K Y KLA +LHPD+NK GA GAFKL+ EAWSLLSDK +R +Y++KLN+ G+ V K A T+ NGFH+S S NS+ Q+ T + S P P + +TFWT C+ CK Q++Y R+ +N L Sbjct: 1 MECNKDEAVRAKEIAERKFTERDYAGAKKFALKAQNLFPQLEGLSQLLVTFDVYASAEKKTITGEVDWYSVLGVNPWADDETVKKQYRKLALMLHPDKNKSLGADGAFKLVSEAWSLLSDKGKRLAYNEKLNVIGTQQRVSTQNKVPSAPTTVNGFHSSNSTVNSDARTQNKNTRAVPTSGPSPSHPKPETFWTICNRCKTQYEYLRIYLNHTL 214 HSP 2 Score: 90.5077 bits (223), Expect = 1.728e-15 Identity = 50/112 (44.64%), Postives = 67/112 (59.82%), Query Frame = 3 Query: 1239 LNLPGLKTVFRRHSERSKTWAIPREEFFHFSHQVPSYLVTGQEGLKSCKGCLKLDPAATPSELLQVFTEAQVVIMKRAREDVPFVDSKRSEEKELVENDQEMKPNTTKEGVR 1574 + + G KTVF RH + ++ IP+E FSHQVP +L+TG+E + KGC +LDPAATP ELLQV TEAQ V R + V+ ++ E+VE K + KEG R Sbjct: 641 VKVAGFKTVFHRHMDPNEIRRIPKEAMLRFSHQVPDHLLTGEEAHNAPKGCRELDPAATPLELLQVITEAQTVETTRETVEEITVNFTETKVDEMVE-----KASNAKEGER 747 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097367 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097367 ID=g.barbadense_cottongen_reftransV1_0097367; Name=g.barbadense_cottongen_reftransV1_0097367; organism=Gossypium barbadense; type=contig; length=2195bpback to top |