g.barbadense_cottongen_reftransV1_0091568, g.barbadense_cottongen_reftransV1_0091568 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: GIS2_YEAST (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIS2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 2.668e-17 Identity = 59/163 (36.20%), Postives = 84/163 (51.53%), Query Frame = 1 Query: 1513 STTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEP---------VCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSA 1974 S C+ C + GHLA C E +C K GH+ DC PR + + C NC + GH ++CT ++ C NC++TGH++R+C EP C C H+A+ C K I G + C CGQ GH+S+DC + +C NC GH+ +CP A Sbjct: 2 SQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTV--EFKQCYNCGETGHVRSECTVQR-CFNCNQTGHISREC-PEPKKTSRFSKVSCYKCGGPNHMAKDCMK---EDGISG----LKCYTCGQAGHMSRDCQNDRLCYNCNETGHISKDCPKA 153 HSP 2 Score: 82.0333 bits (201), Expect = 2.624e-16 Identity = 54/146 (36.99%), Postives = 76/146 (52.05%), Query Frame = 1 Query: 1573 EPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNE-----KACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCF-----SIVICSNCGGRGHLHYECPSARM 1980 + C + GK+GHLA DC RLC NC K GH DCT K C NC +TGH+ +C + C CN +GH++R+C + K +S RF + C CG P H+++DC S + C CG GH+ +C + R+ Sbjct: 3 QKACYVCGKIGHLAEDC-------DSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ-RCFNCNQTGHISRECPEPKKTS----RFSKVSCYKCGGPNHMAKDCMKEDGISGLKCYTCGQAGHMSRDCQNDRL 136 HSP 3 Score: 59.6918 bits (143), Expect = 6.797e-9 Identity = 36/95 (37.89%), Postives = 49/95 (51.58%), Query Frame = 1 Query: 1705 NEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDR 1989 ++KAC C K GHLA DC +E +C CN GHV C + F+ C NCG+ GH+ +C ++ C NC GH+ ECP + R Sbjct: 2 SQKACYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTV-----EFKQ--CYNCGETGHVRSEC-TVQRCFNCNQTGHISRECPEPKKTSR 88 HSP 4 Score: 57.7658 bits (138), Expect = 3.441e-8 Identity = 34/98 (34.69%), Postives = 53/98 (54.08%), Query Frame = 1 Query: 1492 HIAVECNSTTICWNCKEPGHLAGQCPYEP---------VCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDC 1758 H+ EC + C+NC + GH++ +CP EP C G H+A+DC+ + C C +AGH DC N++ C NC++TGH+++DC Sbjct: 57 HVRSEC-TVQRCFNCNQTGHISRECP-EPKKTSRFSKVSCYKCGGPNHMAKDCM--KEDGISGLKCYTCGQAGHMSRDCQNDRLCYNCNETGHISKDC 150
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CNBP_RAT (Cellular nucleic acid-binding protein OS=Rattus norvegicus GN=Cnbp PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.329e-13 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 1522 ICWNCKEPGHLAGQCP-YEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADC--TNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC 1908 IC+ C E GHLA C E C G+ GH+A+DC P+ + C NC K GH DC +E+ C +C + GH+ +DC + C C +GHVA C+K ++ C CG+ GH++++C Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTS----------EVNCYRCGESGHLAREC 171 HSP 2 Score: 57.7658 bits (138), Expect = 3.671e-8 Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 1717 CNNCHKTGHLARDCH-NEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYECPSARMY 1983 C C ++GHLA+DC E C C GH+A+ C + K R R+ C NCG+PGH+++DC C +CG GH+ +C + Y Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPK-------REREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY 138
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CNBP_PONAB (Cellular nucleic acid-binding protein OS=Pongo abelii GN=CNBP PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.329e-13 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 1522 ICWNCKEPGHLAGQCP-YEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADC--TNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC 1908 IC+ C E GHLA C E C G+ GH+A+DC P+ + C NC K GH DC +E+ C +C + GH+ +DC + C C +GHVA C+K ++ C CG+ GH++++C Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTS----------EVNCYRCGESGHLAREC 171 HSP 2 Score: 57.7658 bits (138), Expect = 3.671e-8 Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 1717 CNNCHKTGHLARDCH-NEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYECPSARMY 1983 C C ++GHLA+DC E C C GH+A+ C + K R R+ C NCG+PGH+++DC C +CG GH+ +C + Y Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPK-------REREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY 138
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CNBP_HUMAN (Cellular nucleic acid-binding protein OS=Homo sapiens GN=CNBP PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.329e-13 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 1522 ICWNCKEPGHLAGQCP-YEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADC--TNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC 1908 IC+ C E GHLA C E C G+ GH+A+DC P+ + C NC K GH DC +E+ C +C + GH+ +DC + C C +GHVA C+K ++ C CG+ GH++++C Sbjct: 53 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTS----------EVNCYRCGESGHLAREC 171 HSP 2 Score: 57.7658 bits (138), Expect = 3.671e-8 Identity = 34/92 (36.96%), Postives = 49/92 (53.26%), Query Frame = 1 Query: 1717 CNNCHKTGHLARDCH-NEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYECPSARMY 1983 C C ++GHLA+DC E C C GH+A+ C + K R R+ C NCG+PGH+++DC C +CG GH+ +C + Y Sbjct: 54 CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPK-------REREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY 138
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: HEXP_LEIMA (DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.377e-13 Identity = 62/218 (28.44%), Postives = 86/218 (39.45%), Query Frame = 1 Query: 1492 HIAVEC--------NSTTICWNCKEPGHLAGQCPYEP--------VCNM*GKMGHLARDCLNPRLP-AHDARLCNNCYKAGHFVADC------------------------TNEKACNNCHKTGHLARDCHN---------EPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIV-------ICSNCGGRGHLHYECPSA 1974 H A EC +T C+ C E GH++ +CP E C G+ GH++RDC N P A C C + GH DC + ++ C C GH++RDC N + C C +GH++R C + G D C CG+ GH+S++C S C CG GH+ ECP A Sbjct: 26 HYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAG---DRKCYKCGESGHMSRECPSAGSTGSGDRACYKCGKPGHISRECPEA 240 HSP 2 Score: 75.0998 bits (183), Expect = 1.936e-13 Identity = 63/205 (30.73%), Postives = 80/205 (39.02%), Query Frame = 1 Query: 1510 NSTTICWNCKEPGHLAGQCPY--------EPVCNM*GKMGHLARDCLNP-RLPAHDARLCNNCYKAGHFVADCTNEK--------ACNNCHKTGHLARDC------------------------HNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC---------FSIVICSNCGGRGHLHYECPSA 1974 S+T C NC + GH A +CP C G+ GH++R+C N R A A C C +AGH DC N C C + GHL+RDC + C C +GH++R C + G D C CG GHIS+DC C CG GH+ ECPSA Sbjct: 13 ESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAG---DRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSA 214 HSP 3 Score: 70.0922 bits (170), Expect = 7.491e-12 Identity = 57/206 (27.67%), Postives = 80/206 (38.83%), Query Frame = 1 Query: 1522 ICWNCKEPGHLAGQCPYEP--------VCNM*GKMGHLARDCLNPRLPAHDA-----------------RLCNNCYKAGHFVADCTN---------EKACNNCHKTGHLARDCHN---------EPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIV------------ICSNCGGRGHLHYECPSA 1974 C+ C E GH++ CP C G+ GHL+RDC + + + R C C AGH DC N ++ C C GH++RDC N + C C SGH++R+C + D C CG+PGHIS++C C CG GH+ +CPS+ Sbjct: 71 TCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSG-----DRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDCPSS 271
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CNBP_BOVIN (Cellular nucleic acid-binding protein OS=Bos taurus GN=CNBP PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.001e-13 Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 1 Query: 1522 ICWNCKEPGHLAGQCP-YEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADC--TNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC 1908 IC+ C E GHLA C E C G+ GH+A+DC P+ + C NC K GH DC +E+ C +C + GH+ +DC + C C +GHVA C+K ++ C CG+ GH++++C Sbjct: 46 ICYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTS----------EVNCYRCGESGHLAREC 164 HSP 2 Score: 70.4774 bits (171), Expect = 2.552e-12 Identity = 61/182 (33.52%), Postives = 76/182 (41.76%), Query Frame = 1 Query: 1513 STTICWNCKEPGHLAGQCPYE----------------------PVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTN-----EKACNNCHKTGHLARDCH--NEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYEC 1965 S+ C+ C GH A +CP +C G+ GHLA+DC DA C NC + GH DC E+ C NC K GHLARDC +E C C GH+ + C K K C CG+ GH++ +C S V C CG GHL EC Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC----DLQEDA--CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK-------------CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 164
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CNBP_CHICK (Cellular nucleic acid-binding protein OS=Gallus gallus GN=CNBP PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.732e-13 Identity = 59/183 (32.24%), Postives = 76/183 (41.53%), Query Frame = 1 Query: 1513 STTICWNCKEPGHLAGQCPYE-----------------------PVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTN-----EKACNNCHKTGHLARDCH--NEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYEC 1965 S+ C+ C GH A +CP +C G+ GHLA+DC + + C NC + GH DC E+ C NC K GHLARDC +E C C GH+ + C K K C CG+ GH++ +C S V C CG GHL EC Sbjct: 2 SSNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC-----DLQEDKACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK-------------CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 166 HSP 2 Score: 56.9954 bits (136), Expect = 6.532e-8 Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 1 Query: 1594 GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDC--HNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYECPSARMY 1983 G+ GH AR+C P + + F++ + C C ++GHLA+DC + C C GH+A+ C + K R R+ C NCG+PGH+++DC C +CG GH+ +C + Y Sbjct: 10 GRTGHWAREC--PTGIGRGRGMRSRGRAGFQFMSS-SLPDICYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPK-------REREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY 133
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: BYR3_SCHPO (Cellular nucleic acid-binding protein homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=byr3 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 2.890e-13 Identity = 52/144 (36.11%), Postives = 66/144 (45.83%), Query Frame = 1 Query: 1576 PVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCT---NEKACNNCHKTGHLARDCHNEP------VCNICNISGHVARQCAKWKLSSD--IGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSA 1974 P C G+ GH AR+C +C NC + GH ++CT EK C C GHL RDC + P C C GH+AR C S GG ++ C CG GH ++DC V C +CG GH +EC A Sbjct: 17 PRCYNCGENGHQARECT-------KGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAECYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRSFECQQA 153 HSP 2 Score: 70.8626 bits (172), Expect = 2.318e-12 Identity = 57/162 (35.19%), Postives = 70/162 (43.21%), Query Frame = 1 Query: 1489 SHIAVECNSTTICWNCKEPGHLAGQCP---YEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADC-TNEKA-------------CNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVI 1923 H A EC +IC+NC + GH A +C E C G GHL RDC + P A C C + GH DC TN + C C GH ARDC C C GH + +C + +SD C C QPGHI+ +C S VI Sbjct: 26 GHQARECTKGSICYNCNQTGHKASECTEPQQEKTCYACGTAGHLVRDCPSSPNPRQGAE-CYKCGRVGHIARDCRTNGQQSGGRFGGHRSNMNCYACGSYGHQARDCTMGVKCYSCGKIGHRSFEC---QQASD------GQLCYKCNQPGHIAVNCTSPVI 177
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CNBP_MOUSE (Cellular nucleic acid-binding protein OS=Mus musculus GN=Cnbp PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 3.974e-13 Identity = 46/133 (34.59%), Postives = 69/133 (51.88%), Query Frame = 1 Query: 1522 ICWNCKEPGHLAGQCPYE--PVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADC--TNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC 1908 IC+ C E GHLA C + C G+ GH+A+DC P+ + C NC K GH DC +E+ C +C + GH+ +DC + C C +GHVA C+K ++ C CG+ GH++++C Sbjct: 53 ICYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPKRERE--QCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDC-TKVKCYRCGETGHVAINCSKTS----------EVNCYRCGESGHLAREC 172 HSP 2 Score: 70.8626 bits (172), Expect = 2.038e-12 Identity = 59/189 (31.22%), Postives = 75/189 (39.68%), Query Frame = 1 Query: 1513 STTICWNCKEPGHLAGQCPYE-----------------------------PVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTN-----EKACNNCHKTGHLARDCH--NEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYEC 1965 S+ C+ C GH A +CP +C G+ GHLA+DC + C NC + GH DC E+ C NC K GHLARDC +E C C GH+ + C K K C CG+ GH++ +C S V C CG GHL EC Sbjct: 2 SSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDC-----DLQEDEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVK-------------CYRCGETGHVAINCSKTSEVNCYRCGESGHLAREC 172 HSP 3 Score: 56.9954 bits (136), Expect = 7.261e-8 Identity = 33/93 (35.48%), Postives = 49/93 (52.69%), Query Frame = 1 Query: 1717 CNNCHKTGHLARDC--HNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDC--FSIVICSNCGGRGHLHYECPSARMY 1983 C C ++GHLA+DC + C C GH+A+ C + K R R+ C NCG+PGH+++DC C +CG GH+ +C + Y Sbjct: 54 CYRCGESGHLAKDCDLQEDEACYNCGRGGHIAKDCKEPK-------REREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY 139
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Match: CSP1_ARATH (Cold shock protein 1 OS=Arabidopsis thaliana GN=CSP1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.093e-11 Identity = 53/170 (31.18%), Postives = 68/170 (40.00%), Query Frame = 1 Query: 1525 CWNCKEPGHLAGQCPY-------------EPVCNM*GKMGHLARDCLNPRLPAHDARL--------CNNCYKAGHFVADCTNEKACNN-------------CHKTGHLARDC--HNEPV--CNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIV 1920 C+NC + GH A C C G +GH+ARDC + D R C C GHF DCT + A N C GH+ARDC +P C C SGH+AR C + GG D C CG+ GH +++C S+ Sbjct: 134 CYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDCDQRGS----GGGGNDNACYKCGKEGHFARECSSVA 299 HSP 2 Score: 57.3806 bits (137), Expect = 1.565e-7 Identity = 48/163 (29.45%), Postives = 65/163 (39.88%), Query Frame = 1 Query: 1594 GKMGHLARDCLNPRLPAHDARL------CNNCYKAGHFVADCTN-------------EKACNNCHKTGHLARDCHNEPV---------------CNICNISGHVARQCAKWKLSSDI-GGRFRDIFCRNCGQPGHISQDCFS----IVICSNCGGRGHLHYEC 1965 G++GH+++DC R C NC GHF DCT+ C C GH+ARDC + V C C GH AR C + + ++ G C +CG GHI++DC + C CGG GHL +C Sbjct: 106 GELGHISKDCGIGGGGGGGERRSRGGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQPSRGCYQCGGSGHLARDC 268
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: A5C1C7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_044067 PE=4 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 7.416e-70 Identity = 109/172 (63.37%), Postives = 128/172 (74.42%), Query Frame = 1 Query: 1492 HIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGG-----RFRDIFCRNCGQPGHISQDCFS-IVICSNCGGRGHLHYECPSARMYDR 1989 HIA EC + ++CWNC+EPGH A CP E +C+ GK GHLARDC P +P D RLCNNCYK GH ADCTN+KACNNC KTGHLARDC N+PVCN+CN+SGHVARQC K + D GG FRDI CRNC Q GH+S+DC + ++IC NCGGRGH+ +ECPS R DR Sbjct: 1610 HIASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGHMAFECPSGRFMDR 1781 HSP 2 Score: 97.0561 bits (240), Expect = 2.618e-17 Identity = 51/141 (36.17%), Postives = 68/141 (48.23%), Query Frame = 1 Query: 1606 HLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPV-------CNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMY-DRSGVRR 2004 H+A +C LC NC + GH ++C NE C+ C KTGHLARDC PV CN C GH+A C D C NC + GH+++DC + +C+ C GH+ +CP A + DR G R Sbjct: 1610 HIASECTT-------RSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTN------------DKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPKANVLGDRGGGPR 1731
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: A0A0C9RUI6_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_12480_1360 transcribed RNA sequence OS=Wollemia nobilis PE=4 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 6.465e-68 Identity = 111/175 (63.43%), Postives = 131/175 (74.86%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSD-IGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRR 2004 L HIA EC + ++CWNC+EPGH+A QC +P+C+ GK+GHL+RDC P P D RLCNNCYK GH ADCTNEKACNNC KTGHLARDC N PVCN+CN+SGHVARQC K ++ + RF DI CR+C QPGH+S+DC I+IC NCGGRGHL YECPS R+ R RR Sbjct: 70 LPGHIAAECTTKSLCWNCREPGHVASQCTNDPICHTCGKVGHLSRDCTAPPPPPGDIRLCNNCYKQGHIAADCTNEKACNNCRKTGHLARDCPNSPVCNLCNVSGHVARQCPKARVIDERPPPRFNDIICRSCNQPGHMSRDCTDIIICHNCGGRGHLAYECPSGRLMPRDTRRR 244 HSP 2 Score: 105.145 bits (261), Expect = 1.416e-21 Identity = 63/168 (37.50%), Postives = 83/168 (49.40%), Query Frame = 1 Query: 1525 CWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEP-------VCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRRY 2007 C NCK PGH A CP PVCN G GH+A +C LC NC + GH + CTN+ C+ C K GHL+RDC P +CN C GH+A C K C NC + GH+++DC + +C+ C GH+ +CP AR+ D R+ Sbjct: 46 CKNCKRPGHFARDCPNVPVCNNCGLPGHIAAECTT-------KSLCWNCREPGHVASQCTNDPICHTCGKVGHLSRDCTAPPPPPGDIRLCNNCYKQGHIAADCTNEKA------------CNNCRKTGHLARDCPNSPVCNLCNVSGHVARQCPKARVIDERPPPRF 194
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: Q6EIC6_HYAOR (Putative zinc finger protein OS=Hyacinthus orientalis PE=2 SV=1) HSP 1 Score: 232.646 bits (592), Expect = 7.256e-67 Identity = 112/176 (63.64%), Postives = 131/176 (74.43%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDI-GGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRRY 2007 L HIA EC + T+CWNCKEPGH+A +C E VC+ K GHLARDC L + D RLCNNC++ GH ADCTN+K CNNC K GHLAR+C N+PVCN+CN+SGHVARQC K L S+I GG FRDI CR C QPGHIS+DC IVIC+ CGGRGH+ YECPS R+ DR RR+ Sbjct: 69 LPGHIAAECTAKTLCWNCKEPGHMANECSNEAVCHNCNKTGHLARDCSASGLSSFDTRLCNNCHRPGHIAADCTNDKTCNNCRKPGHLARECTNDPVCNVCNVSGHVARQCPKSNLPSEIHGGPFRDIICRVCNQPGHISRDCVGIVICNTCGGRGHMAYECPSGRLLDRGMFRRF 244 HSP 2 Score: 97.0561 bits (240), Expect = 8.482e-19 Identity = 60/149 (40.27%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 1519 TICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYEC 1965 IC NCK PGH A C H+A +CNNC GH A+CT + C NC + GH+A +C NE VC+ CN +GH+AR C+ LSS F C NC +PGHI+ DC + C+NC GHL EC Sbjct: 43 VICKNCKRPGHFARDC------------SHIA--------------VCNNCGLPGHIAAECTAKTLCWNCKEPGHMANECSNEAVCHNCNKTGHLARDCSASGLSS-----FDTRLCNNCHRPGHIAADCTNDKTCNNCRKPGHLAREC 160
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: A9NU66_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 8.887e-66 Identity = 111/183 (60.66%), Postives = 131/183 (71.58%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSD---------IGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRR 2004 L HIAVEC + ++CWNC+EPGH+A QC +P+C+ GK GHL+RDC P LP D RLCNNCYK GH A+CTNEKACNNC KTGHLARDC N PVCN+CNISGHVAR+C K ++ D GRF DI CR C +PGH S++C I+IC NCGGRGH+ YECPS R+ R RR Sbjct: 66 LPGHIAVECTTKSLCWNCREPGHVASQCSNDPICHTCGKSGHLSRDCTAPELPPGDIRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCTNSPVCNLCNISGHVARECPKGRILDDNRGGRFMDERRGRFNDIICRTCNEPGHTSRECTPILICHNCGGRGHVAYECPSGRVMLRDMRRR 248 HSP 2 Score: 86.2705 bits (212), Expect = 3.309e-15 Identity = 50/147 (34.01%), Postives = 72/147 (48.98%), Query Frame = 1 Query: 1597 KMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFR-----------------DIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYD 1986 + GH ARDC N +CNNC GH +CT + C NC + GH+A C N+P+C+ C SGH++R C +L G R + C NC + GH+++DC + +C+ C GH+ ECP R+ D Sbjct: 47 RPGHFARDCPN-------VSVCNNCGLPGHIAVECTTKSLCWNCREPGHVASQCSNDPICHTCGKSGHLSRDCTAPELPP---GDIRLCNNCYKQGHIAAECTNEKACNNCRKTGHLARDCTNSPVCNLCNISGHVARECPKGRILD 183
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: W1NN66_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00201p00015360 PE=4 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.981e-65 Identity = 113/181 (62.43%), Postives = 134/181 (74.03%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKL------SSDIGGRFR-DIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRR 2004 L HIA EC S ++CWNC+EPGH+A QC EP+C+ GKMGHL+++C P LP D RLCNNCYK GH ADCTNEKACNNC KTGHLARDC NEPVCNICN++GHVARQC K ++ G +R D+ CR C Q GH+S+DC +VIC NCGGRGHL YECPS R+ D+ G+RR Sbjct: 44 LPGHIAAECTSKSLCWNCREPGHMANQCSNEPICHTCGKMGHLSKECSAPELPPGDLRLCNNCYKQGHVAADCTNEKACNNCRKTGHLARDCSNEPVCNICNVAGHVARQCPKAEVFGERERGGRGGFNYRGDMVCRTCNQVGHMSRDCMGVVICHNCGGRGHLAYECPSGRLIDQ-GMRR 223 HSP 2 Score: 90.1225 bits (222), Expect = 2.188e-16 Identity = 48/123 (39.02%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 1597 KMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYEC 1965 ++GH ARDC N +CNNC GH A+CT++ C NC + GH+A C NEP+C+ C GH++++C+ +L G R C NC + GH++ DC + C+NC GHL +C Sbjct: 25 RLGHFARDCPN-------VSICNNCGLPGHIAAECTSKSLCWNCREPGHMANQCSNEPICHTCGKMGHLSKECSAPELPP---GDLR--LCNNCYKQGHVAADCTNEKACNNCRKTGHLARDC 135
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: D7U5H5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g00620 PE=4 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 3.736e-64 Identity = 110/175 (62.86%), Postives = 129/175 (73.71%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGG-----RFRDIFCRNCGQPGHISQDCFS-IVICSNCGGRGHLHYECPSARMYDR 1989 L HIA EC + ++CWNC+EPGH A CP E +C+ GK GHLARDC P +P D RLCNNCYK GH ADCTN+KACNNC KTGHLARDC N+PVCN+CN+SGHVARQC K + D GG FRDI CRNC Q GH+S+DC + ++IC NCGGRGH+ +ECPS R DR Sbjct: 67 LPGHIASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPPGDLRLCNNCYKQGHIAADCTNDKACNNCRKTGHLARDCRNDPVCNLCNVSGHVARQCPKANVLGDRGGGPRSSGFRDIVCRNCQQLGHMSRDCAAPLMICRNCGGRGHMAFECPSGRFMDR 241 HSP 2 Score: 82.0333 bits (201), Expect = 7.315e-14 Identity = 50/149 (33.56%), Postives = 70/149 (46.98%), Query Frame = 1 Query: 1519 TICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYEC 1965 +C NCK PGH A +CP + +C+NC GH ++CT C NC + GH A +C NE +C+ C +GH+AR C+ + G R C NC + GHI+ DC + C+NC GHL +C Sbjct: 41 NLCKNCKRPGHYARECP--------------------------NVAVCHNCSLPGHIASECTTRSLCWNCQEPGHTASNCPNEGICHTCGKTGHLARDCSAPPVPP---GDLR--LCNNCYKQGHIAADCTNDKACNNCRKTGHLARDC 158
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: A0A061FDW4_THECC (Zinc knuckle family protein OS=Theobroma cacao GN=TCM_034155 PE=4 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 8.585e-64 Identity = 111/181 (61.33%), Postives = 133/181 (73.48%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGG-----RFRDIFCRNCGQPGHISQDCFSI-VICSNCGGRGHLHYECPSARMYDRSGVRRY 2007 L HIA EC + CWNC+EPGH+A CP E +C+ GK GH ARDC NP++ + D RLCNNC++ GH ADCTN+KAC NC KTGHLARDCH++PVCN+CNISGHVARQC K + SD GG +RD+ CRNC Q GHIS++C +IC NCGGRGH+ YECPS R+ DR G RRY Sbjct: 175 LPGHIASECTTQAQCWNCREPGHVASHCPNEGICHSCGKTGHRARDCPNPQMQSGDMRLCNNCFRPGHLAADCTNDKACKNCRKTGHLARDCHSDPVCNLCNISGHVARQCPKGHILSDRGGGSRNNGYRDVVCRNCNQVGHISRECRGAPIICHNCGGRGHMAYECPSGRLADR-GYRRY 354
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: E0CPI0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13550 PE=4 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 1.194e-62 Identity = 106/174 (60.92%), Postives = 129/174 (74.14%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGG-----RFRDIFCRNCGQPGHISQDCF-SIVICSNCGGRGHLHYECPSARMYD 1986 L HIA EC + ++CWNC+EPGH+A CP E +C+ K GH ARDC P LP+ D RLCNNCYK GH ADCTN+KAC NC KTGH+ARDC NEPVCN+CNI+GHVARQC K ++ + GG FRD+ CR+C Q GH+S+DC S+VIC+NCGGRGH+ +ECPS R D Sbjct: 75 LPGHIASECTTQSLCWNCREPGHMASNCPNEGICHSCNKTGHRARDCPTPGLPSGDLRLCNNCYKQGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKAEIFGERGGGGRNTGFRDVICRSCNQVGHMSRDCMVSLVICNNCGGRGHMAFECPSGRFMD 248 HSP 2 Score: 88.9669 bits (219), Expect = 4.651e-16 Identity = 56/176 (31.82%), Postives = 80/176 (45.45%), Query Frame = 1 Query: 1519 TICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFR-----------------DIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSG 1995 +C NCK PGH A +CP + +CNNC GH ++CT + C NC + GH+A +C NE +C+ CN +GH AR C L S G R D C+NC + GHI++DC + +C+ C GH+ +CP A ++ G Sbjct: 49 NLCNNCKRPGHFARECP--------------------------NVAICNNCNLPGHIASECTTQSLCWNCREPGHMASNCPNEGICHSCNKTGHRARDCPTPGLPS---GDLRLCNNCYKQGHIAADCTNDKACKNCRKTGHIARDCQNEPVCNLCNIAGHVARQCPKAEIFGERG 195
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: A0A068TM26_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_1 OS=Coffea canephora GN=GSCOC_T00014200001 PE=4 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 3.441e-62 Identity = 110/185 (59.46%), Postives = 132/185 (71.35%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSD----------IGGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRRY 2007 L HIA EC + ++CWNC+EPGH+AG CP E +C+ GK GH ARDC P +P D RLCNNC+K GH ADCTN+KAC NC KTGHLARDC N+PVCN+CNISGHVAR C K + + +GG +R+I CRNC Q GH+S+DC +++IC NCGGRGHL YECPS R DR RRY Sbjct: 71 LPGHIASECTTKSLCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAPPMPPGDLRLCNNCFKQGHMAADCTNDKACKNCRKTGHLARDCQNDPVCNLCNISGHVARDCPKGNIFDERGGGPRIGGGVGGGYREIVCRNCQQVGHMSRDCMALMICHNCGGRGHLAYECPSGRFMDRF-PRRY 254 HSP 2 Score: 81.6481 bits (200), Expect = 1.219e-13 Identity = 52/176 (29.55%), Postives = 80/176 (45.45%), Query Frame = 1 Query: 1510 NSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDIGGRFR-----------------DIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYD 1986 + +++C NCK PGH A RDC N +C+NC GH ++CT + C NC + GH+A +C NE +C+ C +GH AR C + G R D C+NC + GH+++DC + +C+ C GH+ +CP ++D Sbjct: 42 SQSSLCKNCKRPGHFA-------------------RDCTN-------VAICHNCGLPGHIASECTTKSLCWNCREPGHMAGNCPNEGICHTCGKAGHRARDCTAPPMPP---GDLRLCNNCFKQGHMAADCTNDKACKNCRKTGHLARDCQNDPVCNLCNISGHVARDCPKGNIFD 188
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Match: C0P3V6_MAIZE (Uncharacterized protein OS=Zea mays PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 4.429e-62 Identity = 106/178 (59.55%), Postives = 131/178 (73.60%), Query Frame = 1 Query: 1483 LCSHIAVECNSTTICWNCKEPGHLAGQCPYEPVCNM*GKMGHLARDCLNPRLPAHDARLCNNCYKAGHFVADCTNEKACNNCHKTGHLARDCHNEPVCNICNISGHVARQCAKWKLSSDI---GGRFRDIFCRNCGQPGHISQDCFSIVICSNCGGRGHLHYECPSARMYDRSGVRRY 2007 L H A EC S T+CWNCKEPGH+A +C E +C+ K GHLARDC + +LCN C+K+GH DCTNE+ACNNC + GH+AR+C N+PVCN+CN+SGHVAR C K L+S+I GG FRDI CR CGQPGHIS++C + VIC CGGRGH+ YECPSAR++DR G RR+ Sbjct: 83 LPGHFAAECTSKTVCWNCKEPGHIASECKNEALCHTCNKTGHLARDCP---TSGANVKLCNKCFKSGHIAVDCTNERACNNCRQPGHIARECKNDPVCNLCNVSGHVARVCPKTTLASEIHIQGGPFRDILCRICGQPGHISRNCMATVICDTCGGRGHMSYECPSARIFDR-GFRRF 256 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 11
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BLAST of g.barbadense_cottongen_reftransV1_0091568 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0091568 ID=g.barbadense_cottongen_reftransV1_0091568; Name=g.barbadense_cottongen_reftransV1_0091568; organism=Gossypium barbadense; type=contig; length=2239bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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