g.barbadense_cottongen_reftransV1_0095074, g.barbadense_cottongen_reftransV1_0095074 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.335e-15 Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 1588 SPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061 +PN NS + G RS E+ S +R +TA E+ AV A FE T NP F +V+RPSY+ C M++PS F K+L+ + L K W + K A GW EF +N++ GD+CVFEL++ + +++V + V Sbjct: 74 NPNPEEVNSS----TPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPT-NPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKL-QLGEKQWPVRCLY----KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRV 222 HSP 2 Score: 70.8626 bits (172), Expect = 4.518e-12 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++RA A F +NP F VV+ PSY+ +++P F ++YL + + + W V + K G+AKF S+ W +F +N + GDVCVFEL+ +LEV R Sbjct: 112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.272e-14 Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 1591 PNQHGQNSK----LEVLSSGISSD--AQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061 P + G+ K E+ SS D RS E+ S +R +TA E+ A+ A FE T NP F +V+RPSY+ C M++PS F K+L+ K W + K A GW EF +N+L GD+CVFEL++ + ++KV + V Sbjct: 180 PKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPT-NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI-SGFIKVQLAEKQWPVRCL----YKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337 HSP 2 Score: 69.3218 bits (168), Expect = 5.034e-11 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++RA A F +NP F VV+ PSY+ +++P F ++YL + + + W V + K G+AKF S+ W +F +N L GDVCVFEL+ +L+V R Sbjct: 227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica GN=Os11g0197600 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.497e-12 Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVV 2064 S QR +T +S + +T EK HA+Q A F+S +NP + +M SYV M IP F R+ L +TL + GK W + Y + + GGW +F N+L D+CVFEL++ I KV IY VV Sbjct: 261 SKGQRQLT--VISQRRPVTEAEKDHALQRAREFKS-KNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSD--RSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNI--KVHIYRVV 393 HSP 2 Score: 68.1662 bits (165), Expect = 1.524e-10 Identity = 83/359 (23.12%), Postives = 142/359 (39.55%), Query Frame = 1 Query: 1807 RMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLD--------------DSPLDQKTKKKMTSPSFQPCKLMRT--NPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG--KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMV-LRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 RM IPS+F + ++L + +G W A+ E GW EFV DN + G VF K + + V + S + I+ + A + ++ A P+ +E +T +D ++ + + +++K S K+ T N + + + KS N +L + + GE+ R + + + PV K A A F++ NP ++ SY+ ++IP EFV+ L + + + L G+ W V Y + G G WG+FA N LE DVCVFEL+ ++ ++V I+R Sbjct: 44 RMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEG----FFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMA--PALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGG---WGKFAVGNNLEKFDVCVFELVQKDN--IKVHIYR 391
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1235_ORYSJ (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica GN=Os01g0723500 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.451e-8 Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAH--LYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKA 2082 + E+ A +IA AF S P +I M +V M P+ F+R+ L + ++ L + GK W + PN L GWC F N L GD CVFEL+ E +V I+ VV+ A A Sbjct: 267 VATAERQRATEIAHAFRSP-LPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLYI-------PNTRDRLSRGWCAFARGNCLEEGDYCVFELVAAAEF--RVHIFRVVEPAVPA 387
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.485e-8 Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 1756 NPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELI 2019 NP F ++ S++ K +M+IP F + + +S GK+W + + + KK +A GW EF DN L VGD CVFEL+ Sbjct: 53 NPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDA----GWSEFAVDNRLLVGDACVFELV 136
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.149e-8 Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 1675 ALSCV----QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMF-IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058 L+C+ RLT ++K A S E P++ ++R S V GK + I + +L + N+TL GK W R + + L GW F ++N+L VGDIC+FEL+K E M V I P Sbjct: 900 VLNCILPKHTRLTDMQKQQLESKVGAIHS-EIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTL-QRHGKNWEV-LCRTKDTR--TKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIP 1027
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0B0P1A8_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_26429 PE=4 SV=1) HSP 1 Score: 849.736 bits (2194), Expect = 0.000e+0 Identity = 421/426 (98.83%), Postives = 424/426 (99.53%), Query Frame = 1 Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEK HAVQIASAF+STENPVFM+VMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV IYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVRNDRERRSSARRCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLI+I Sbjct: 409 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKTHAVQIASAFKSTENPVFMVVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVRNDRERRSSARRCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIKI 834 HSP 2 Score: 289.656 bits (740), Expect = 0.000e+0 Identity = 139/140 (99.29%), Postives = 139/140 (99.29%), Query Frame = 3 Query: 1149 GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKLKTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL 1568 G ICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKLKTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL Sbjct: 252 GDICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKLKTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL 391 HSP 3 Score: 225.328 bits (573), Expect = 2.907e-58 Identity = 118/204 (57.84%), Postives = 143/204 (70.10%), Query Frame = 1 Query: 1651 AQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKK 2262 A+ SV TE LSC Q+LT EKA AVQIASAF+STE+PVFM++MRPS V K RM IP +F KFL + CNLTLCNS GKTW F+R ++KK +A LYGGW FV+DN +NVGDICVFELI+ PEILMKV IYP KNAS AC QA SI S+++T SLVS + CQQ+ P SS E L DS +++ + TK+ Sbjct: 138 ARPSVKTEVLSCPQKLTDTEKAQAVQIASAFKSTEHPVFMVLMRPSSVCYKYRMVIPLDFALKFLPKHNCNLTLCNSAGKTWPVTFYRNTQSKKLSAQLYGGWQTFVKDNRINVGDICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE---LKDSKLKTQKNIDFQNSTKE 338 HSP 4 Score: 89.7373 bits (221), Expect = 5.426e-15 Identity = 80/251 (31.87%), Postives = 102/251 (40.64%), Query Frame = 3 Query: 1005 SMFTSKTPHFFKVILQETITHG--RLGIPRNFVRKYGNQLSSHVKL------------------EVPN------------------GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE-----------LKDSKL-----------------------------------KTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQ 1505 S F S F V+++ + G R+ IP NF RK+ ++ L + PN G ICVFELI+ PEILMKVQIYP KNAS AC QA SI S+++T SLVS + CQQ+ P SS E L DS L K +K+++FQ TKE+ GE + +ND S C KPD V Q Sbjct: 464 SAFKSTENPVFMVVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVRNDRERRSSARRCPKPDPVYGKQ 714 HSP 5 Score: 69.3218 bits (168), Expect = 1.338e-8 Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 1 Query: 2455 CPKPDPVYGKQRACVGASAFR-TSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSG-EMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIH 2823 CP+ K +A ASAF+ T +P F V++ PS + + IP++F ++L K + L G+ W V + R +K A+ W F KDN++ VGD+CVFEL+ + L++V I+ Sbjct: 149 CPQKLTDTEKAQAVQIASAFKSTEHPVFMVLMRPSSVCYKYRMVIPLDFALKFLPKHNCNLTLCNSAGKTWPVTFYRNTQSKKLSAQLYG-GWQTFVKDNRINVGDICVFELIRQPEILMKVQIY 272
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2VJR0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_013G245600 PE=4 SV=1) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 309/426 (72.54%), Postives = 342/426 (80.28%), Query Frame = 1 Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847 KKMRI+S NQH QNSKLEVLSSG S DAQR+V T+A SCVQRL A EKAHAVQIASAFESTENPVFM VM+PSYV G CRMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + Y NKKPNAHLYGGW EFVEDNHLNVGDICVFELIK+PEILMK IYP VKNASKA Q+LGSIVS+VK R LVSDA+ +CQQS P SSRE DLTDS+I++LDDSPLDQKTKKK+T S QPCK+ RT+ S S QAKGIK EK KSLNFQY T+E+GG+L + +PDPVY KQRAC G AFRTSNPSFSVVIHPS++ S S++HIP EF KRYLKKSGEM+LRV DGR W VEY R+ + KA F +SWGQFA DN+ EVGDVCVFELMNENGNLLEV IHRK LLIEI Sbjct: 111 KKMRIDSSNQHDQNSKLEVLSSGTSPDAQRNVKTKAFSCVQRLAANEKAHAVQIASAFESTENPVFMTVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-YLANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKAQIYPGVKNASKARWQQSLGSIVSQVKNRILVSDAEPNCQQS--PSSSRESKDLTDSHIKTLDDSPLDQKTKKKLTRLSVQPCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTQELGGDLFWK-------EVRCSEMSEPDPVYQKQRACTGGGAFRTSNPSFSVVIHPSHVRSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSTSRKAVFEGKSWGQFAMDNEFEVGDVCVFELMNENGNLLEVVIHRKLLLIEI 525 HSP 2 Score: 81.2629 bits (199), Expect = 1.558e-12 Identity = 65/176 (36.93%), Postives = 80/176 (45.45%), Query Frame = 3 Query: 1002 CSMFTSKTPHFFKVILQETITHG--RLGIPRNFVRKYGNQLSS------------HVKLEV-----PN------------------GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE---LKDSKLKTQKNIDFQNSTKE 1409 S F S F ++Q + G R+ IP +F RK+ S H KL PN G ICVFELI+ PEILMK QIYP KNAS A Q+ SI SQ++ LVS EP+CQQ+ P SS E L DS +KT + TK+ Sbjct: 165 ASAFESTENPVFMTVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYYLANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKAQIYPGVKNASKARWQQSLGSIVSQVKNRILVSDAEPNCQQS--PSSSRESKDLTDSHIKTLDDSPLDQKTKK 338
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0B0PB32_GOSAR (B3 domain-containing transcription factor VRN1-like protein OS=Gossypium arboreum GN=F383_28292 PE=4 SV=1) HSP 1 Score: 591.267 bits (1523), Expect = 0.000e+0 Identity = 304/403 (75.43%), Postives = 337/403 (83.62%), Query Frame = 1 Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVF 2778 KKMRI+S NQHGQNSKL+VLSSG S DAQR+V T+A SCVQRL AIEKAHAVQIASAFESTENP+FMIVM+PSYV G CRMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + +P NKKPNAHL GGW EFVEDNHLNVGDICVFELIKHPEILMKV IYPVVKNASKA G QALGSIVSRVKTRSLVSDA+ +CQQS S + DLTDS+I++L DSPLDQKTKKK+T S QPCK+ RT+ S S QAKGIK EK KSLNFQY T+E+GG LK S + D R+S ARRC KPDPVY KQRAC G AFRTSNPSFSVVIHPS+IGS S++HIP EF KRYLKK+GEM+LRV DGR W VEY R +NKG KA FG +SWGQFA DN+LEVGD+ F Sbjct: 327 KKMRIDSSNQHGQNSKLKVLSSGTSPDAQRTVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPIFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-HPANKKPNAHLCGGWREFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKASGQQALGSIVSRVKTRSLVSDAEPNCQQSPSSSSESK--DLTDSHIKTLHDSPLDQKTKKKLTRSSAQPCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKQRACTGGGAFRTSNPSFSVVIHPSHIGSCSTVHIPEEFGKRYLKKNGEMMLRVADGRSWNVEYERIGTNKGRKAGFGGKSWGQFAMDNELEVGDLLEF 725 HSP 2 Score: 119.013 bits (297), Expect = 0.000e+0 Identity = 66/116 (56.90%), Postives = 79/116 (68.10%), Query Frame = 3 Query: 1224 NASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSELKDSKL-KTQKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQPLTPTEKQRATDIASWSSLRL 1568 ++S+ R A SI + T SLVS T Q+ RCP S+ELKDSK K +K +D Q S K+L+ EF C AK+DNGGVSG GCLKPDL+ + QPL PTEKQRA DI SWSS RL Sbjct: 195 SSSSTGRVDAQRSIGNTDGTRSLVSDTNSSSQE-RCPSGSTELKDSKFQKRKKRVDSQYSKKDLRDEFICSAKHDNGGVSGACGCLKPDLIGRTQPLAPTEKQRAADIVSWSSSRL 309 HSP 3 Score: 100.908 bits (250), Expect = 2.238e-18 Identity = 84/248 (33.87%), Postives = 106/248 (42.74%), Query Frame = 3 Query: 1002 CSMFTSKTPHFFKVILQETITHG--RLGIPRNFVRKYGNQLSS------------HVKLEVPN-----------------------GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSS-ELKDSKLKT------------------------------------------QKNIDFQNSTKELKGEFRCLAKNDNGGVSGDWGCLKPDLVSKMQ 1505 S F S F +++Q + G R+ IP +F RK+ S H KL P G ICVFELI+ PEILMKVQIYP KNAS A QA SI S+++T SLVS EP+CQQ+ S S +L DS +KT K+++FQ ST+EL G + AK D+G SG CLKPD V + Q Sbjct: 381 ASAFESTENPIFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYHPANKKPNAHLCGGWREFVEDNHLNVGDICVFELIKHPEILMKVQIYPVVKNASKASGQQALGSIVSRVKTRSLVSDAEPNCQQSPSSSSESKDLTDSHIKTLHDSPLDQKTKKKLTRSSAQPCKMTRTSLSGSIQAKGIKHEKGKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKQ 628 HSP 4 Score: 95.1301 bits (235), Expect = 1.206e-16 Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 3 Query: 1005 SMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPE 1187 +MFTSKTPHFFKVILQET+ G LGIPR FVRKYGNQLSS VKLEVP+GAI EL + E Sbjct: 11 TMFTSKTPHFFKVILQETLRDGILGIPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDE 71 HSP 5 Score: 67.781 bits (164), Expect = 3.896e-8 Identity = 40/116 (34.48%), Postives = 60/116 (51.72%), Query Frame = 1 Query: 2482 KQRACVGASAFR-TSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIH 2823 K A ASAF T NP F +V+ PSY+ + + IP +F +++L + L G+ W + A+ K G W +F +DN L VGD+CVFEL+ L++V I+ Sbjct: 374 KAHAVQIASAFESTENPIFMIVMQPSYVRGTCRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYHPANKKPNAHLCGG--WREFVEDNHLNVGDICVFELIKHPEILMKVQIY 487
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2SWF9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071400 PE=4 SV=1) HSP 1 Score: 486.878 bits (1252), Expect = 5.008e-161 Identity = 252/270 (93.33%), Postives = 256/270 (94.81%), Query Frame = 1 Query: 2038 MKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847 MKV YPVVKNASKACG QALGSIVSRVKTRSLVSDAKRSCQQSAR PS REFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKL RTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELK SV+ND RRSSARR PKPDPVYGKQRACVGASAFRTSNPSFSVVI PSYIGSSS+LHIPVEFVKRYLKKSGEMVLRV DGRIW+VEYRR ASNKG KAKFGSRSWGQFAKDNQLEVGDVC+FELMNENGNLLEVAIHRKHLLIEI Sbjct: 1 MKVQTYPVVKNASKACGTQALGSIVSRVKTRSLVSDAKRSCQQSARLPSCREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKL-RTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKCSVKNDSGRRSSARRRPKPDPVYGKQRACVGASAFRTSNPSFSVVIQPSYIGSSSALHIPVEFVKRYLKKSGEMVLRVADGRIWVVEYRRTASNKGRKAKFGSRSWGQFAKDNQLEVGDVCLFELMNENGNLLEVAIHRKHLLIEI 269 HSP 2 Score: 72.4034 bits (176), Expect = 1.829e-10 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 1711 KAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYG-GWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 K A ASAF T NP F +V++PSY+ + IP F +++L + L + G+ W ++ R NK A W +F +DN L VGD+C+FEL+ L++V I+ Sbjct: 148 KQRACVGASAFR-TSNPSFSVVIQPSYIGSSSALHIPVEFVKRYLKK-SGEMVLRVADGRIWVVEYRRTASNKGRKAKFGSRSWGQFAKDNQLEVGDVCLFELMNENGNLLEVAIH 261
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2TYV0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071500 PE=4 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 5.479e-114 Identity = 196/316 (62.03%), Postives = 222/316 (70.25%), Query Frame = 1 Query: 1891 TWHA----KFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 TW A K++ P+NK NA+LYGGW EFVEDNHLNVGD+CVFELIK PEILMKV+I +V+N SKAC A GSI SRV TRSLVSDA+ +CQQS P SS E DLTDSYIE+LDDSPLDQ+TKK +T S QPC ELKYS +D R S A+RC KPDPVY KQRAC+G AFRTSN SFSVVIHPSY+GS S+LHIP EF KRYLK SGEM+LR+ DG+ W VEY R+A NKG KA+F S SWGQF DN+LEVGDVCVFEL+NENGNLLEVA + Sbjct: 49 TWLAIFQHKYYSNPKNKDRNAYLYGGWREFVEDNHLNVGDVCVFELIKLPEILMKVVINLLVENTSKACDSLAFGSIDSRVNTRSLVSDAEPTCQQSLCPSSSGESKDLTDSYIETLDDSPLDQETKK-LTPRSIQPC------------------------------------ELKYSAEDDSGRTSGAQRCLKPDPVYQKQRACIGGGAFRTSNSSFSVVIHPSYVGSCSALHIPKEFGKRYLKNSGEMMLRIEDGKTWTVEYERRARNKGRKAEFKSNSWGQFTIDNELEVGDVCVFELINENGNLLEVAFRK 327 HSP 2 Score: 92.4337 bits (228), Expect = 1.094e-16 Identity = 59/128 (46.09%), Postives = 74/128 (57.81%), Query Frame = 3 Query: 1149 GAICVFELIRQPEILMKVQIYPAAKNASNACRSQADNSIASQLRTGSLVSVTEPDCQQTRCPYSSSE---LKDSKLKTQKNIDFQNSTKELK------GEFRCLAKNDNGGVSGDWGCLKPDLVSKMQ 1505 G +CVFELI+ PEILMKV I +N S AC S A SI S++ T SLVS EP CQQ+ CP SS E L DS ++T + TK+L E + A++D+G SG CLKPD V + Q Sbjct: 87 GDVCVFELIKLPEILMKVVINLLVENTSKACDSLAFGSIDSRVNTRSLVSDAEPTCQQSLCPSSSGESKDLTDSYIETLDDSPLDQETKKLTPRSIQPCELKYSAEDDSGRTSGAQRCLKPDPVYQKQ 214
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A061DMT4_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_000519 PE=4 SV=1) HSP 1 Score: 348.591 bits (893), Expect = 8.276e-101 Identity = 204/438 (46.58%), Postives = 274/438 (62.56%), Query Frame = 1 Query: 1570 KKMRINSPNQHGQNSKLEV-----LSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIK-HPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREF-IDLTD------SYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPD------PVYGKQR--ACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 K+M+++SPN+ G + K ++ + G+S QRS E L V LTA EK A+Q AS F+ T+NP FM+VM+PSYV RM +P F RK+ M + N+ L S+G++W AK++ P P A L GW EF + N L VGD+CVFEL + PEIL+KV+I + A P A GSI RVK R L SD + +C Q+ P+ RE+ + T+ + IE LDD PL+Q TKKK+ P FQPC++M+TNPS Q KGI+L K+K SL+FQY T E+GGE K+S +++ S A+RC KPD P+ ++ A A AF+++NPSF+VV+ PSY+ SL IP +FVKRY KK+GE+ LRV DGR WIV+Y + + K KF SRSW F DN L+VGDVCVFEL+ NGN +V I Sbjct: 154 KEMKVDSPNEIGTHLKSKISAPAAMGGGVS--GQRSPQIEVLETVGHLTADEKTKALQKASGFK-TKNPFFMVVMQPSYVSFSYRMSVPDGFARKYFKMTQGNVILRISSGQSWPAKYYCRPNIDNPRAQLRDGWQEFAKHNALEVGDVCVFELTRTSPEILLKVVICKRFFEDAIAARPLAGGSIAYRVKKRRLFSDTETNCLQNQ--PAIREYRVPKTEQNENIHTSIEILDDFPLNQITKKKLPFPGFQPCRMMKTNPS---QVKGIELGKQKTSLDFQYSTNELGGEFKFSGKDESVGMSGAQRCSKPDFLGRMQPLTTTEKKIALKRAMAFKSANPSFTVVMQPSYVLPGGSLSIPSQFVKRYFKKNGEVTLRVSDGRTWIVDYNGEGDGQCPKGKFRSRSWRAFVLDNNLKVGDVCVFELIKANGNSFDVVI 583 HSP 2 Score: 162.925 bits (411), Expect = 9.368e-38 Identity = 135/410 (32.93%), Postives = 192/410 (46.83%), Query Frame = 1 Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYG-GWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTN---------PSE---------SNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVG--------ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS--GEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELM 2787 S AQR + L +Q LT EK A++ A AF+S NP F +VM+PSYVL + IPS F +++ +TL S G+TW + + + P W FV DN+L VGD+CVFELIK V+I+P AS C L D++ C+++ + IE L+ + QKT++K + +P K+M+ N SE N+A GIKLE+ K S + +EVG LK CP+ + Q+ A AF + NP F VVI PS+I + + IP F ++Y K+ GE VL + DG+ W V+Y R+ + + +F S W +FA DN L VGDVCVFEL+ Sbjct: 449 SGAQRCSKPDFLGRMQPLTTTEKKIALKRAMAFKSA-NPSFTVVMQPSYVLPGGSLSIPSQFVKRYFKK-NGEVTLRVSDGRTWIVDYNGEGDGQCPKGKFRSRSWRAFVLDNNLKVGDVCVFELIKANGNSFDVVIFPDANIAS--CSSSKL--------------DSRYQCKEAE-----------DEGSIEILECTAPCQKTREKSSIQCPRPQKMMKINMINKTEKILESEYIDPRFRPFCNKACGIKLEEPKGSTSSSCCKQEVG--LK-PATRTGTSTEKGWECPEQAEILRSQKLTAKVKAKTLRIAKAFNSKNPFFLVVIQPSHISRNYKMCIPSNFARKYFTKTHGGETVLCLSDGKSWSVKYYRRGDDGNPRGQF-SGGWKKFALDNNLVVGDVCVFELL 825 HSP 3 Score: 111.309 bits (277), Expect = 1.513e-21 Identity = 55/121 (45.45%), Postives = 78/121 (64.46%), Query Frame = 1 Query: 1690 QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLT-MYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVL 2049 Q+LTA KA ++IA AF S +NP F++V++PS++ +M IPSNF RK+ T + LC S GK+W K++R ++ P GGW +F DN+L VGD+CVFEL+K +I KVL Sbjct: 716 QKLTAKVKAKTLRIAKAFNS-KNPFFLVVIQPSHISRNYKMCIPSNFARKYFTKTHGGETVLCLSDGKSWSVKYYRRGDDGNPRGQFSGGWKKFALDNNLVVGDVCVFELLKGADISFKVL 835 HSP 4 Score: 90.1225 bits (222), Expect = 5.420e-15 Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 3 Query: 990 TEDDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178 ++++ SMFTSKTPHFFKVIL ET G+LGIP NFVRKYG QLSS ++LEVP+GA+ EL + Sbjct: 8 SDNEHSMFTSKTPHFFKVILDETFRDGKLGIPTNFVRKYGRQLSSPIRLEVPSGAVWQVELTK 70
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2T1X7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071600 PE=4 SV=1) HSP 1 Score: 271.552 bits (693), Expect = 1.437e-78 Identity = 131/157 (83.44%), Postives = 140/157 (89.17%), Query Frame = 1 Query: 1576 MRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV 2046 MRI++ NQH QNSKLEVLSSG S DAQRSV T+A SCVQRL AIEKAHAVQIASAFESTENPVFMIVM+PSYV G RMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + YP NKKPNAHLYGGW EFVEDNHLNVGDICVFELIK+PEILMK Sbjct: 1 MRIDASNQHEQNSKLEVLSSGTSPDAQRSVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYVRG--RMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-YPANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKT 154 HSP 2 Score: 261.536 bits (667), Expect = 6.731e-75 Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 1 Query: 2269 TSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847 T S Q CK+ RT+ S S QAKGIK EK KSLNFQY T+E+GG LK S + D R+S ARRC KPDPVY K+RAC G AFRTSNPSFSVVIHPS++GS S++HIP EF KRYLKKSGEM+LRV DGR W VEY R+ +KG KA FG +SWGQFA DN+LEVGDVCVFELMNENGNLLEV IHRK LL+EI Sbjct: 154 TRSSVQHCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFRTSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSKGRKAVFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIHRKLLLVEI 345 HSP 3 Score: 70.4774 bits (171), Expect = 1.487e-9 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 1621 EVLSSGISSDAQ--RSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGG--WCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 E L G+ + A+ + A C++ +K A AF T NP F +V+ PS+V + IP F +++L + L + G++W+ ++ R +K A ++GG W +F DN L VGD+CVFEL+ L++V+I+ Sbjct: 192 EELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFR-TSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKK-SGEMMLRVADGRSWNVEYERRGRSKGRKA-VFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIH 337
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2PQB5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071600 PE=4 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 5.932e-78 Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 1 Query: 1570 KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV 2046 KKMRI++ NQH QNSKLEVLSSG S DAQRSV T+A SCVQRL AIEKAHAVQIASAFESTENPVFMIVM+PSYV G RMFIPS+F RKFLT++K NLTLCNSTGKTWHAK + YP NKKPNAHLYGGW EFVEDNHLNVGDICVFELIK+PEILMK Sbjct: 134 KKMRIDASNQHEQNSKLEVLSSGTSPDAQRSVKTKAFSCVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYVRG--RMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLY-YPANKKPNAHLYGGWREFVEDNHLNVGDICVFELIKYPEILMKT 289 HSP 2 Score: 260.381 bits (664), Expect = 6.243e-73 Identity = 137/193 (70.98%), Postives = 154/193 (79.79%), Query Frame = 1 Query: 2269 TSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEI 2847 T S Q CK+ RT+ S S QAKGIK EK KSLNFQY T+E+GG LK S + D R+S ARRC KPDPVY K+RAC G AFRTSNPSFSVVIHPS++GS S++HIP EF KRYLKKSGEM+LRV DGR W VEY R+ +KG KA FG +SWGQFA DN+LEVGDVCVFELMNENGNLLEV IHRK LL+EI Sbjct: 289 TRSSVQHCKMTRTSLSGSIQAKGIKHEK-GKSLNFQYSTEELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFRTSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKKSGEMMLRVADGRSWNVEYERRGRSKGRKAVFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIHRKLLLVEI 480 HSP 3 Score: 93.2041 bits (230), Expect = 2.245e-16 Identity = 46/60 (76.67%), Postives = 49/60 (81.67%), Query Frame = 3 Query: 1008 MFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPE 1187 MFTSKTPHFFKVILQET+ G LGIPR FVRKYGNQLSS VKLEVP+GAI EL + E Sbjct: 1 MFTSKTPHFFKVILQETLRDGILGIPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDE 60 HSP 4 Score: 70.0922 bits (170), Expect = 4.125e-9 Identity = 46/149 (30.87%), Postives = 77/149 (51.68%), Query Frame = 1 Query: 1621 EVLSSGISSDAQ--RSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGG--WCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 E L G+ + A+ + A C++ +K A AF T NP F +V+ PS+V + IP F +++L + L + G++W+ ++ R +K A ++GG W +F DN L VGD+CVFEL+ L++V+I+ Sbjct: 327 EELGGGLKNSAKGDSGRKSGARRCLKPDPVYQKRRACTGGGAFR-TSNPSFSVVIHPSHVGSCSTVHIPEEFGKRYLKK-SGEMMLRVADGRSWNVEYERRGRSKGRKA-VFGGKSWGQFAMDNELEVGDVCVFELMNENGNLLEVVIH 472 HSP 5 Score: 69.3218 bits (168), Expect = 6.653e-9 Identity = 77/326 (23.62%), Postives = 123/326 (37.73%), Query Frame = 1 Query: 1816 IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFR-TSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELM 2787 IP F RK+ + L +G W + + E + L GW EF E L +G VF + VLI+ +S ++ P +S E D++ +K+K+K P P K MR + S ++ ++ + L+ + + SV+ C + K A ASAF T NP F +V+ PSY+ + IP +F +++L + L G+ W + A+ K +G W +F +DN L VGD+CVFEL+ Sbjct: 25 IPRKFVRKYGNQLSSPVKLEVPSGAIWQVELAKTDERVR----LQNGWREFAEHYSLELGSFVVFRYEGNDHF--HVLIF-------------------------------DKSASETEYPHTSTEGNDVS-------------RKSKEKSHLPCPLPQKKMRIDASNQHE----------QNSKLEVLSSGTSPDAQRSVKTKAFS------CVQRLAAIEKAHAVQIASAFESTENPVFMIVMQPSYV--RGRMFIPSDFARKFLTVHKSNLTLCNSTGKTWHAKLYYPANKKPNAHLYGG--WREFVEDNHLNVGDICVFELI 280
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2RB72_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071300 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.253e-40 Identity = 124/393 (31.55%), Postives = 186/393 (47.33%), Query Frame = 1 Query: 1684 CVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYI-ESLDDSPLDQKTKKKMTSP------SFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKK-SGEMVLRVV-DGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL--LEVAIHR 2826 C+ R +T +EKA A+ AS F+S +NP F +VM+P Y++ +C + IP F + L K L S G+TW KF + + W F DN+L VGD+CVFELI E KV I+ A+ + PQA + S+V +++ + P D + Y S DD+ Q K P F C + N S + Q I ++ ++ + T+ G P+ K +A AS F++ NP F+V + PSY+ + L IP++F ++YL+ SG +L +V DG+ W+ +Y R+A +AK W FAKDN LE+GDVCVFE++N G L VAI++ Sbjct: 359 CLMRPMTPVEKARAILKASNFKS-KNPFFKVVMQPRYLILRCSLGIPYKFVNRHLDEEKEEAILRVSDGRTWVVKFTVKVFTGGQHKAEFSTWRAFARDNNLEVGDVCVFELINRHENSFKVSIFSAAPGANSSLSPQADDAEASQVASKNCLV------------PRIEADDDFGNCYAGNSTDDAIASQVASKDWLVPKIEADDDFGKCHV--GNSSSAAQFPAIGYQETEEEVQPTISTRPRG--------------------PQRLQAGEKAKALQRASGFKSQNPFFTVAMQPSYVSNGYRLAIPLDFSRKYLRNGSGNAILSMVGDGKTWLTKYHREAKGTNPRAKLID-GWKTFAKDNNLEIGDVCVFEMINSEGYQLSLNVAIYK 715 HSP 2 Score: 116.316 bits (290), Expect = 2.850e-23 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 1705 IEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 IE A+Q AS+F S ENP F+++M+PSY+ +M IP FT KFL +LTLC S GKTW +++RY NK A ++ GW +F+ DN+L GD+CVFELI E ++KV+IY V ++ S Sbjct: 205 IEYDKALQRASSFRS-ENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYRVRQDTS 328 HSP 3 Score: 96.2857 bits (238), Expect = 5.087e-17 Identity = 94/369 (25.47%), Postives = 160/369 (43.36%), Query Frame = 1 Query: 1747 STENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTS-----PSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG---KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +++ P F ++ + + K ++ IP F RK+ ++ L +G TWHA+ + GW F E L G VF + + L VLI+ + +AS+ P +S + D Q + + D D +L ++P ++T+KK P +P K ++T + N+ + E +S + + +V P+ + +G +A AS+FR+ NP F V++ PSYI + IP EF ++LK++ G++ L +G+ W +Y R S W QF DN LE GDVCVFEL+++ ++L+V I+R Sbjct: 3 ASKTPHFFKIILEATIRDK-KLGIPRKFVRKYGKGLSSSVLLTVPSGDTWHAQLTK----SDGVVWFQNGWQAFAEYYSLQYGHFLVFRYEGNGKFL--VLIFDM--SASEIEYP-----------CKSHIEDHNSDDQVCLKLVNKEAKDDTCDG---TLYETPPCKETRKKKKKKRSRPPCSKPRKKLKTTQKDKNEK-----DWEDESTSEDDMQTKV---------------------PRDEHAFGVIEYDKALQRASSFRSENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYR 322 HSP 4 Score: 72.0182 bits (175), Expect = 1.715e-9 Identity = 33/48 (68.75%), Postives = 37/48 (77.08%), Query Frame = 3 Query: 1008 MFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNG 1151 MF SKTPHFFK+IL+ TI +LGIPR FVRKYG LSS V L VP+G Sbjct: 1 MFASKTPHFFKIILEATIRDKKLGIPRKFVRKYGKGLSSSVLLTVPSG 48
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2SWH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071300 PE=4 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 1.295e-40 Identity = 124/393 (31.55%), Postives = 186/393 (47.33%), Query Frame = 1 Query: 1684 CVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYI-ESLDDSPLDQKTKKKMTSP------SFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKK-SGEMVLRVV-DGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL--LEVAIHR 2826 C+ R +T +EKA A+ AS F+S +NP F +VM+P Y++ +C + IP F + L K L S G+TW KF + + W F DN+L VGD+CVFELI E KV I+ A+ + PQA + S+V +++ + P D + Y S DD+ Q K P F C + N S + Q I ++ ++ + T+ G P+ K +A AS F++ NP F+V + PSY+ + L IP++F ++YL+ SG +L +V DG+ W+ +Y R+A +AK W FAKDN LE+GDVCVFE++N G L VAI++ Sbjct: 370 CLMRPMTPVEKARAILKASNFKS-KNPFFKVVMQPRYLILRCSLGIPYKFVNRHLDEEKEEAILRVSDGRTWVVKFTVKVFTGGQHKAEFSTWRAFARDNNLEVGDVCVFELINRHENSFKVSIFSAAPGANSSLSPQADDAEASQVASKNCLV------------PRIEADDDFGNCYAGNSTDDAIASQVASKDWLVPKIEADDDFGKCHV--GNSSSAAQFPAIGYQETEEEVQPTISTRPRG--------------------PQRLQAGEKAKALQRASGFKSQNPFFTVAMQPSYVSNGYRLAIPLDFSRKYLRNGSGNAILSMVGDGKTWLTKYHREAKGTNPRAKLID-GWKTFAKDNNLEIGDVCVFEMINSEGYQLSLNVAIYK 726 HSP 2 Score: 116.316 bits (290), Expect = 2.929e-23 Identity = 59/125 (47.20%), Postives = 82/125 (65.60%), Query Frame = 1 Query: 1705 IEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 IE A+Q AS+F S ENP F+++M+PSY+ +M IP FT KFL +LTLC S GKTW +++RY NK A ++ GW +F+ DN+L GD+CVFELI E ++KV+IY V ++ S Sbjct: 216 IEYDKALQRASSFRS-ENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYRVRQDTS 339 HSP 3 Score: 96.2857 bits (238), Expect = 5.460e-17 Identity = 95/364 (26.10%), Postives = 152/364 (41.76%), Query Frame = 1 Query: 1747 STENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG---KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +++ P F ++ + + K ++ IP F RK+ ++ L +G TWHA+ + GW F E L G VF + + L VLI+ + +AS+ P +S + D Q + + D D + + P + KKK S PC R KL+ +K N + E E + P+ + +G +A AS+FR+ NP F V++ PSYI + IP EF ++LK++ G++ L +G+ W +Y R S W QF DN LE GDVCVFEL+++ ++L+V I+R Sbjct: 14 ASKTPHFFKIILEATIRDK-KLGIPRKFVRKYGKGLSSSVLLTVPSGDTWHAQLTK----SDGVVWFQNGWQAFAEYYSLQYGHFLVFRYEGNGKFL--VLIFDM--SASEIEYP-----------CKSHIEDHNSDDQVCLKLVNKEAKDDTCDGTL--YETPPCKETRKKKKKKRSRPPCSKPRK-----------KLKTTQKDKNEKDWEDESTSE-----------DDMQTKVPRDEHAFGVIEYDKALQRASSFRSENPFFLVIMQPSYINPGRKMCIPKEFTMKFLKENLGDLTLCTSEGKTWSTQYWRYISRNKYTKAIIHIGWRQFMLDNNLEAGDVCVFELISQTESMLKVIIYR 333 HSP 4 Score: 73.559 bits (179), Expect = 6.047e-10 Identity = 34/49 (69.39%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 1005 SMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNG 1151 SMF SKTPHFFK+IL+ TI +LGIPR FVRKYG LSS V L VP+G Sbjct: 11 SMFASKTPHFFKIILEATIRDKKLGIPRKFVRKYGKGLSSSVLLTVPSG 59 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 6
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0095074 ID=g.barbadense_cottongen_reftransV1_0095074; Name=g.barbadense_cottongen_reftransV1_0095074; organism=Gossypium barbadense; type=contig; length=3001bpback to top |