g.barbadense_cottongen_reftransV1_0095074, g.barbadense_cottongen_reftransV1_0095074 (contig) Gossypium barbadense

Overview
Nameg.barbadense_cottongen_reftransV1_0095074
Unique Nameg.barbadense_cottongen_reftransV1_0095074
Typecontig
OrganismGossypium barbadense (Sea Island cotton)
Sequence length3001
Homology
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.335e-15
Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 1
Query: 1588 SPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061
            +PN    NS     + G      RS   E+ S  +R +TA E+  AV  A  FE T NP F +V+RPSY+   C M++PS F  K+L+     + L     K W  +       K   A    GW EF  +N++  GD+CVFEL++  + +++V  + V
Sbjct:   74 NPNPEEVNSS----TPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPT-NPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKL-QLGEKQWPVRCLY----KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRV 222          

HSP 2 Score: 70.8626 bits (172), Expect = 4.518e-12
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            ++RA   A  F  +NP F VV+ PSY+     +++P  F ++YL      +   +  + W V    +   K G+AKF S+ W +F  +N +  GDVCVFEL+     +LEV   R
Sbjct:  112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.272e-14
Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 1591 PNQHGQNSK----LEVLSSGISSD--AQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061
            P + G+  K     E+ SS    D    RS   E+ S  +R +TA E+  A+  A  FE T NP F +V+RPSY+   C M++PS F  K+L+             K W  +       K   A    GW EF  +N+L  GD+CVFEL++  + ++KV  + V
Sbjct:  180 PKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPT-NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI-SGFIKVQLAEKQWPVRCL----YKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337          

HSP 2 Score: 69.3218 bits (168), Expect = 5.034e-11
Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1
Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            ++RA   A  F  +NP F VV+ PSY+     +++P  F ++YL      +   +  + W V    +   K G+AKF S+ W +F  +N L  GDVCVFEL+     +L+V   R
Sbjct:  227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.497e-12
Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 1
Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVV 2064
            S  QR +T   +S  + +T  EK HA+Q A  F+S +NP  + +M  SYV     M IP  F R+ L      +TL +  GK W   +  Y +  +      GGW +F   N+L   D+CVFEL++   I  KV IY VV
Sbjct:  261 SKGQRQLT--VISQRRPVTEAEKDHALQRAREFKS-KNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSD--RSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNI--KVHIYRVV 393          

HSP 2 Score: 68.1662 bits (165), Expect = 1.524e-10
Identity = 83/359 (23.12%), Postives = 142/359 (39.55%), Query Frame = 1
Query: 1807 RMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLD--------------DSPLDQKTKKKMTSPSFQPCKLMRT--NPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG--KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMV-LRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            RM IPS+F +         ++L + +G  W A+     E          GW EFV DN +  G   VF   K  +  + V     +   S      +   I+        +  A  + ++ A  P+ +E   +T      +D              ++ + + +++K    S    K+  T  N +  +     +     KS N  +L + + GE+    R   + +       +  PV    K  A   A  F++ NP    ++  SY+     ++IP EFV+  L  + + + L    G+ W V Y   +    G    G   WG+FA  N LE  DVCVFEL+ ++   ++V I+R
Sbjct:   44 RMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEG----FFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMA--PALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGG---WGKFAVGNNLEKFDVCVFELVQKDN--IKVHIYR 391          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1235_ORYSJ (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica GN=Os01g0723500 PE=3 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.451e-8
Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 1
Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAH--LYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKA 2082
            +   E+  A +IA AF S   P  +I M   +V     M  P+ F+R+ L   + ++ L +  GK W   +        PN    L  GWC F   N L  GD CVFEL+   E   +V I+ VV+ A  A
Sbjct:  267 VATAERQRATEIAHAFRSP-LPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLYI-------PNTRDRLSRGWCAFARGNCLEEGDYCVFELVAAAEF--RVHIFRVVEPAVPA 387          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.485e-8
Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1
Query: 1756 NPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELI 2019
            NP F  ++  S++  K +M+IP  F  +          + +S GK+W   +  + + KK +A    GW EF  DN L VGD CVFEL+
Sbjct:   53 NPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDA----GWSEFAVDNRLLVGDACVFELV 136          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 6.149e-8
Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 1
Query: 1675 ALSCV----QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMF-IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058
             L+C+     RLT ++K        A  S E P++  ++R S V GK +   I   +   +L   + N+TL    GK W     R  + +     L  GW  F ++N+L VGDIC+FEL+K  E  M V I P
Sbjct:  900 VLNCILPKHTRLTDMQKQQLESKVGAIHS-EIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTL-QRHGKNWEV-LCRTKDTR--TKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIP 1027          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: K4B4X6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g021260.1 PE=4 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 8.136e-22
Identity = 113/397 (28.46%), Postives = 173/397 (43.58%), Query Frame = 1
Query: 1690 QRLTAIEK--AHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVK----TRSLVSDAKRSCQQSARPPS-SREFIDLTDSYIESLDDSPLDQKTKKKM-----TSPSF----QPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL-LEVAIHR 2826
            Q  T +EK  + A Q A AF+S +NP  +  M+PSYV     + IP  F RK+      NL L      +W  K      N K  +    GW  FV+DN L VGD+CVFE++K  ++ + V+I+       +A G   + +IV+ V     ++  V   K+S Q +      + +  +      E L   P  + +K+K        PSF    Q C++ + +           +EKE  +   Q                                          A AF+  NP     + PSY+ +S +L IP++F ++Y L+ +G +VLRV     W V+     +N     K GS  W  F +DN+L+VGDVCVFE++   G L ++V I R
Sbjct:  160 QNKTVMEKESSTAYQQAKAFKS-KNPFIISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTNGKVGS----GWKAFVQDNKLKVGDVCVFEVLK-GQLFVDVIIF-------RAAGSTLMHNIVAEVPRVPCSQPKVVQTKKSKQHTGGSYGLNLKIKEEQGEGTEILGHCPSGRGSKRKQPEVDAVVPSFTKKAQNCRIHKKDSKSVYDQNKTVMEKESSTAYQQ------------------------------------------AKAFKYKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTN----GKVGS-GWKAFVQDNKLKVGDVCVFEVL--KGQLFVDVIIFR 494          

HSP 2 Score: 112.464 bits (280), Expect = 8.564e-22
Identity = 112/397 (28.21%), Postives = 173/397 (43.58%), Query Frame = 1
Query: 1690 QRLTAIEK--AHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVK----TRSLVSDAKRSCQQSARPPSSREFIDLTDSY-IESLDDSPLDQKTKKKMTS-----PSF----QPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL-LEVAIHR 2826
            Q  T +EK  + A Q A AF+  +NP  +  M+PSYV     + IP  F RK+      NL L      +W  K      N K  +    GW  FV+DN L VGD+CVFE++K  ++ + V+I+       +A G   + +IV+ V     ++  V   K+S Q +         I +      E L   P  + +K+K +      PSF    Q C++ + +           +EKE  +   Q                                          A AF++ NP     + PSY+ +S +L IP++F ++Y L+ +G +VLRV     W V+     +N     K GS  W  F +DN+L+VGD+CVFE++   G L ++V I R
Sbjct:  376 QNKTVMEKESSTAYQQAKAFK-YKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTNGKVGS----GWKAFVQDNKLKVGDVCVFEVLK-GQLFVDVIIF-------RAAGSTLMHNIVAEVSRVPYSQPKVVQTKKSKQHTGGSYGLNLKIKVEQGEGTEILGHCPSGRGSKRKQSEVDAVVPSFTKKAQNCRIHKKDSKSVYDQNKTVMEKESSTAYQQ------------------------------------------AKAFKSKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTN----GKVGS-GWKAFVQDNKLKVGDICVFEVL--KGQLFVDVIIFR 710          

HSP 3 Score: 78.5666 bits (192), Expect = 1.948e-11
Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = 1
Query: 1621 EVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYV---LGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058
            E L  G     Q+S +     C+  + A E   A Q A AF S ENP F+  M+PSYV    G  ++ I S+  RKF +  + ++ L  S+ + W  K           A    GW EFV DN L VGD+C+FE    P ++  V+I+P
Sbjct: 1173 EELREGTLRHGQQSTSF----CMGTVVAKEMVLAYQKAKAFTS-ENPFFLSFMQPSYVSLARGPIQLSIASSVARKFFSTRQSDVVLEVSSKRRWTVKC----SVGIKTAKFSCGWKEFVVDNKLKVGDVCIFEWTGRPNLVFNVIIFP 1312          

HSP 4 Score: 78.1814 bits (191), Expect = 2.644e-11
Identity = 92/335 (27.46%), Postives = 137/335 (40.90%), Query Frame = 1
Query: 1690 QRLTAIEK--AHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVK----TRSLVSDAKRSCQQSARPPS-SREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVE 2670
            Q  T +EK  + A Q A AF+S +NP  +  M+PSYV     + IP  F RK+      NL L      +W  K      N K  +    GW  FV+DN L VGDICVFE++K  ++ + V+I+ V        G   + +IV+ V     ++  V   K+S Q +      + +  +      E L   P  + +K+K      QP                   E +    +F   TK+ GG      +  +      +           QR    A AF++ NP     + PSYI     L I   F ++Y L+  G +VLRV     W V+
Sbjct:  592 QNKTVMEKESSTAYQQAKAFKS-KNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTNGKVGS----GWKAFVQDNKLKVGDICVFEVLK-GQLFVDVIIFRV-------AGSTLMHNIVAEVPRVPCSQPKVVQTKKSKQHTGGSYGLNLKIKEEQGEGTEILGHCPSGRGSKRK------QP-------------------EVDAVVSSFTRKTKKSGGSCGLHKKQSKIVYDKNKTVTDKKSSIAYQR----AKAFKSKNPFIVSFMQPSYISKHYILKIWSAFARKYFLENDGNLVLRVSGSGSWSVK 884          

HSP 5 Score: 72.0182 bits (175), Expect = 1.938e-9
Identity = 69/229 (30.13%), Postives = 110/229 (48.03%), Query Frame = 1
Query: 2176 PPSSREF----------IDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL-LEVAIHR 2826
            P SSR F          IDL++S ++ ++D+P  QK K+K+   S +       N      +K  +   +  S +F   TK+V     +   +      +     K      +Q     A AF++ NP     + PSY+ +S +L IP++F ++Y L+ +G +VLRV     W V+     +N     K GS  W  F +DN+L+VGDVCVFE++   G L ++V I R
Sbjct:   72 PYSSRTFHFHETHHAPIIDLSESDVDIMEDTPRRQKLKEKVVDHSLE-------NLCYGQISKRKRHGDDVASPSF---TKKVQNCRIHKKDSKSVYDQNKTVMEKESSTAYQQ-----AKAFKSKNPFIISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTN----GKVGS-GWKAFVQDNKLKVGDVCVFEVL--KGQLFVDVIIFR 278          

HSP 6 Score: 69.707 bits (169), Expect = 1.094e-8
Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1
Query: 2503 ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            A AFR+ NP     + PSY+    +LH+   + ++YL +K G++VLR      W V+Y        G+ +    SW  F  DN+L+ GDVCVFEL+      L+V I R
Sbjct: 1009 AKAFRSKNPFVIYFMQPSYVSRPYNLHMTFSYAQKYLWEKCGDLVLRAAGRGSWSVKYDLGLPE--GRIRL---SWRAFVLDNKLKSGDVCVFELIKGTQPFLDVIIFR 1112          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2MI58_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G020000 PE=4 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.842e-22
Identity = 67/177 (37.85%), Postives = 89/177 (50.28%), Query Frame = 1
Query: 1687 VQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYV----LGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDL 2205
            +Q+L   EK  A++ AS    +ENP F++VM+PSYV        R+ IP+NF RK L    C++TLCNS+GKTW   F      KK  ++L  GW  FV DN++ VGD C FELI   EI   V+IY          GP         + +  ++   KR  Q  A P  S     L
Sbjct:  213 IQQLKPHEKDDALERASKTFKSENPFFLVVMQPSYVGLSHSKGYRLAIPANFVRKHLMKELCSITLCNSSGKTWIVTFKNNQIGKKQTSYLLTGWGTFVHDNNVRVGDACAFELINSIEISFNVVIYQ---------GPHT--KCYQSLSSTDIIRPMKRKDQSYASPSGSETLTAL 378          

HSP 2 Score: 93.5893 bits (231), Expect = 2.471e-16
Identity = 61/134 (45.52%), Postives = 76/134 (56.72%), Query Frame = 1
Query: 1690 QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYP-ENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY--PVVKNASKA 2082
            + LTA+EKA A Q+ASAF+S E P F+ V++PSY     RM IP  F RK+L        L  S GK+W   + ++  E+   NA    GW  F  DN L VGD CVFELI   E  MKV IY    VK++S A
Sbjct:  373 ETLTALEKAKAFQVASAFKS-EYPFFISVLQPSYSR---RMNIPVIFARKYLAKMHKEAILLLSNGKSWPVIYCQHKIESTGANAIFGSGWRRFSHDNKLEVGDSCVFELIMAAETSMKVTIYKKQAVKDSSLA 502          

HSP 3 Score: 84.3445 bits (207), Expect = 1.722e-13
Identity = 90/322 (27.95%), Postives = 141/322 (43.79%), Query Frame = 1
Query: 1849 MYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGAS-AFRTSNPSFSVVIHPSYIGSSSS----LHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAK--FGSRSWGQFAKDNQLEVGDVCVFELMN 2790
            ++K  LT CN  GK W                   GW EF     L+ G + VF    +      V+I+   + A++   P    + + R   RS +  +K                   D    +L+D    +K ++K   P  QPCK+M +    +N A   ++E + KS   ++L +++  E   +   D+  R    +  KP   + K  A   AS  F++ NP F VV+ PSY+G S S    L IP  FV+++L K    + L    G+ WIV ++   +N+ GK +  +    WG F  DN + VGD C FEL+N
Sbjct:   63 VWKVELTKCN--GKIW----------------FENGWLEFSNHYSLDFGHLLVFRYDGNSN--FHVVIFD--RTATEILYPYTRYNHIHR---RSNIDKSK------------------DDDSTPNLEDISTSRKLREKSQMPCPQPCKMMHS----TNSAIKTEIECDGKS---EFLAQQIRYEGCPARNGDKSTRHRVIQQLKP---HEKDDALERASKTFKSENPFFLVVMQPSYVGLSHSKGYRLAIPANFVRKHLMKELCSITLCNSSGKTWIVTFK---NNQIGKKQTSYLLTGWGTFVHDNNVRVGDACAFELIN 328          

HSP 4 Score: 81.2629 bits (199), Expect = 1.787e-12
Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKK-SGEMVLRVVDGRIWIVEY-RRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKH 2832
            K +A   ASAF++  P F  V+ PSY   S  ++IPV F ++YL K   E +L + +G+ W V Y + K  + G  A FGS  W +F+ DN+LEVGD CVFEL+      ++V I++K 
Sbjct:  380 KAKAFQVASAFKSEYPFFISVLQPSY---SRRMNIPVIFARKYLAKMHKEAILLLSNGKSWPVIYCQHKIESTGANAIFGS-GWRRFSHDNKLEVGDSCVFELIMAAETSMKVTIYKKQ 494          

HSP 5 Score: 68.5514 bits (166), Expect = 1.567e-8
Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 3
Query:  996 DDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178
            +D   F S +PHFFK+ILQ+TI +G+LG+PR FV+  GN +SS   L VP+G +   EL +
Sbjct:   10 NDHLKFISNSPHFFKIILQDTIQNGKLGVPRKFVKNQGNSMSSPAMLSVPSGEVWKVELTK 70          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A061DGP3_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000518 PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.263e-21
Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 1
Query: 2464 PDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820
            P   + K RA + AS+FR+ NP F VV+ P+Y+G+  S++IP +F KR++ +K   ++L+V +GR WIV++  K +N G +      +W  FA+DN LEVGDVCVFEL+N +    +V+I
Sbjct:  400 PLSSHEKARAMLRASSFRSENPFFKVVMQPAYLGARCSVNIPYKFAKRHVDEKEDRVILQVSNGRRWIVKFSVKVTNSGQRKARFYDTWRAFAQDNNLEVGDVCVFELINRDETSFKVSI 519          

HSP 2 Score: 104.375 bits (259), Expect = 5.906e-20
Identity = 99/342 (28.95%), Postives = 152/342 (44.44%), Query Frame = 1
Query: 1828 FTRKFLTMYKCNLT----LCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQR---ACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            F RKF+T Y  +L+    L   +G TWH +  +       +  L  GW EF E   L  G   VF+     +   +VLI+ +  +AS+   P    ++           D    CQ+    P+  E  D  D  +E L ++P  +KT++   +P  +P K++R     +  +   K + E  S    YL  +V                     P+    +G      A   ASAF++ N  F V + PSYI     L +P  F+ + LK K G++ L  +DG+ W  +Y     +NK  KA      W  F +DN+LE+GDVCVFEL+ +   LL+V I+R
Sbjct:   43 FPRKFVTKYGDSLSSPVLLMVPSGSTWHVELIK----SDGDVWLQNGWKEFAEHYSLKHGHFLVFKY--QGDCNFQVLIFDM--SASEIEYPHISPNM-----------DRDEVCQE----PNKEE--DAKDDSVEVLYETPRVRKTRQNSQTPCLRPRKILR----RTTLSDKYKRDCEDVSSGEGYLKTKV---------------------PRGRHAFGDNENATALQRASAFKSENFFFVVEMQPSYINPGRKLCLPSSFITKCLKEKVGDVTLCTLDGKTWPAKYCCYLTNNKYTKAALHC-GWTAFMQDNKLELGDVCVFELIEQTKILLKVIIYR 333          

HSP 3 Score: 103.219 bits (256), Expect = 1.501e-19
Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 1708 EKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076
            E A A+Q ASAF+S EN  F++ M+PSY+    ++ +PS+F  K L     ++TLC   GKTW AK+  Y   NK   A L+ GW  F++DN L +GD+CVFELI+  +IL+KV+IY V +++S
Sbjct:  217 ENATALQRASAFKS-ENFFFVVEMQPSYINPGRKLCLPSSFITKCLKEKVGDVTLCTLDGKTWPAKYCCYLTNNKYTKAALHCGWTAFMQDNKLELGDVCVFELIEQTKILLKVIIYRVSQDSS 339          

HSP 4 Score: 86.2705 bits (212), Expect = 3.986e-14
Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKF-FRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055
            L++ EKA A+  AS+F S ENP F +VM+P+Y+  +C + IP  F ++ +   +  + L  S G+ W  KF  +   + +  A  Y  W  F +DN+L VGD+CVFELI   E   KV I+
Sbjct:  401 LSSHEKARAMLRASSFRS-ENPFFKVVMQPAYLGARCSVNIPYKFAKRHVDEKEDRVILQVSNGRRWIVKFSVKVTNSGQRKARFYDTWRAFAQDNNLEVGDVCVFELINRDETSFKVSIF 520          

HSP 5 Score: 74.7146 bits (182), Expect = 1.626e-10
Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 3
Query: 1005 SMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178
            SMFT KTPHFFK+IL++TI H +L  PR FV KYG+ LSS V L VP+G+    ELI+
Sbjct:   18 SMFTPKTPHFFKIILEDTIRHSKLRFPRKFVTKYGDSLSSPVLLMVPSGSTWHVELIK 75          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: G7KVW7_MEDTR (Transcriptional factor B3 family protein OS=Medicago truncatula GN=MTR_7g050720 PE=4 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 5.355e-21
Identity = 107/377 (28.38%), Postives = 157/377 (41.64%), Query Frame = 1
Query: 1729 IASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFL-----TMY-------KCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVG-------ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL----KKSGEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELM 2787
            +A+ F  T    F I+   S   GK  + IP  F  K+       +Y       K  L L  S GK W  K                GW EFV+ + L+ G + +F+  +     + +     ++                 +K  S   ++KR        P + E  DL D YI S          KK+ T+ SF+        P E      + + K +K     ++ K+  G L ++                     GKQ A          A++ RT NPSF  V+HPSYI ++ +LHIP EF KR+L    KK G++ LR+++G++W   Y  RK + KG K +  S  W  FA+DN L+VGDVC FEL 
Sbjct:    1 MANEFPPTH--FFKIICDQSLHQGK--LIIPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLVKSDGKIWFEK----------------GWKEFVKYHSLSQGHLLLFKYGRTSHFHVHIFDKSALE-----------------IKYPSQRVESKRVSNDLGNKPQNDE--DLED-YIAS----------KKRKTNLSFE-----FNQPYEIGSNSCVNVGKLEKVAALNHIDKKCKGCLNFA---------------------GKQLAIAKKVTTFDRANSMRTCNPSFIAVMHPSYIDAACNLHIPSEFGKRHLLGLGKKKGDIHLRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFELF 301          

HSP 2 Score: 69.3218 bits (168), Expect = 2.861e-9
Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = 1
Query: 1576 MRINSPNQHGQNS-----KLEVLSSGISSDAQ----RSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMY---KCNLTLCNSTGKTWHAKFFRYPENKKPNA-HLYGG-WCEFVEDNHLNVGDICVFELIKHPEILMKVL 2049
               N P + G NS     KLE +++    D +     +   + L+  +++T  ++A++++       T NP F+ VM PSY+   C + IPS F ++ L      K ++ L    GK W A++     N+K     +Y   W  F EDN+L VGD+C FEL     IL  ++
Sbjct:  147 FEFNQPYEIGSNSCVNVGKLEKVAALNHIDKKCKGCLNFAGKQLAIAKKVTTFDRANSMR-------TCNPSFIAVMHPSYIDAACNLHIPSEFGKRHLLGLGKKKGDIHLRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFELFPTSTILTFIV 311          
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A067K133_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18412 PE=4 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 1.080e-19
Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 1
Query: 1525 NKELLILQVGLP*D*KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076
            +K + +  + LP   KKM++ +P +  +  +      G   + Q+ +        Q LT   KA+A+  A     ++NP FM+VM+PSYV    +M+IP  F R++L + + ++ L    G+TW +  +      K N  L GGW +F  DNHL VGD+CVFEL+      +KV+I+   K+AS
Sbjct:  168 HKNMKLENLTLPETCKKMKLENPTRKNEAKR------GSCGEKQKFIWR-----TQPLTKNYKANALHRARTAFKSKNPFFMVVMQPSYVHAGNKMWIPERFARRYLKIKRGDVILIVMGGRTW-SIIYHCNNKTKLNPRLCGGWTKFSHDNHLEVGDVCVFELVNPAITKLKVVIFRYSKDAS 339          

HSP 2 Score: 100.138 bits (248), Expect = 4.312e-19
Identity = 108/375 (28.80%), Postives = 162/375 (43.20%), Query Frame = 1
Query: 1741 FESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQ-QSARPPSSREFID--LTDSYIESLDDSPLDQKTK----KKMTSPSFQPCKLMR-TNPSESNQAK-GIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSR---SWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826
            FE+ + P F+ ++    +  K ++  P  F RK+      ++ L   +   W  +  +          L  GW EFVE   L VG + VFE  +       V+I+   K+A +   P           T ++ ++ K +   + A+   S E +D  L    I     SPL    K    + +T P  + CK M+  NP+  N+AK G   EK+K     Q LTK                             Y         +AF++ NP F VV+ PSY+ + + + IP  F +RYLK K G+++L V+ GR W + Y     +   K K   R    W +F+ DN LEVGDVCVFEL+N     L+V I R
Sbjct:   13 FEANK-PHFLKIVLADTIRDK-KLVFPRKFVRKYGNNLPSSIVLTVPSCAKWQVELIK----SDGEIWLQNGWQEFVEYYALTVGSLLVFEYDER-NCRFNVIIFD--KSALEINYPY----------TVNVENEGKGTNNPEEAKYDVSYESLDEVLPSRKIMEESPSPLPNPHKNMKLENLTLP--ETCKKMKLENPTRKNEAKRGSCGEKQKFIWRTQPLTKN----------------------------YKANALHRARTAFKSKNPFFMVVMQPSYVHAGNKMWIPERFARRYLKIKRGDVILIVMGGRTWSIIY-----HCNNKTKLNPRLCGGWTKFSHDNHLEVGDVCVFELVNPAITKLKVVIFR 333          
The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot)
Total hits: 6
Match NameE-valueIdentityDescription
REM19_ARATH2.335e-1533.33B3 domain-containing protein REM19 OS=Arabidopsis ... [more]
VRN1_ARATH1.272e-1433.54B3 domain-containing transcription factor VRN1 OS=... [more]
Y1176_ORYSJ1.497e-1236.43B3 domain-containing protein Os11g0197600 OS=Oryza... [more]
Y1235_ORYSJ1.451e-832.82B3 domain-containing protein Os01g0723500 OS=Oryza... [more]
Y6112_ORYSJ1.485e-835.23B3 domain-containing protein Os06g0112300 OS=Oryza... [more]
Y3216_ORYSJ6.149e-833.08Putative B3 domain-containing protein Os03g0621600... [more]
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BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
K4B4X6_SOLLC8.136e-2228.46Uncharacterized protein OS=Solanum lycopersicum GN... [more]
A0A0D2MI58_GOSRA8.842e-2237.85Uncharacterized protein OS=Gossypium raimondii GN=... [more]
A0A061DGP3_THECC4.263e-2143.33AP2/B3-like transcriptional factor family protein,... [more]
G7KVW7_MEDTR5.355e-2128.38Transcriptional factor B3 family protein OS=Medica... [more]
A0A067K133_JATCU1.080e-1933.15Uncharacterized protein OS=Jatropha curcas GN=JCGZ... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 64..163
e-value: 2.4E-13
score: 60.3
coord: 320..419
e-value: 1.1E-20
score: 84.7
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 321..418
e-value: 6.6E-17
score: 61.1
coord: 64..152
e-value: 2.0E-18
score: 66.0
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 320..419
score: 13.916
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 64..161
score: 13.578
IPR015300DNA-binding pseudobarrel domainGENE3D2.40.330.10coord: 58..158
e-value: 2.2E-21
score: 75.0
coord: 311..418
e-value: 7.7E-21
score: 73.2
IPR015300DNA-binding pseudobarrel domainSUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 315..413
IPR015300DNA-binding pseudobarrel domainSUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 59..161
NoneNo IPR availablePANTHERPTHR31920:SF16SUBFAMILY NOT NAMEDcoord: 2..254
NoneNo IPR availablePANTHERPTHR31920:SF16SUBFAMILY NOT NAMEDcoord: 282..417
NoneNo IPR availablePANTHERPTHR31920FAMILY NOT NAMEDcoord: 282..417
coord: 2..254

Sequences
The following sequences are available for this feature:

contig sequence

>g.barbadense_cottongen_reftransV1_0095074 ID=g.barbadense_cottongen_reftransV1_0095074; Name=g.barbadense_cottongen_reftransV1_0095074; organism=Gossypium barbadense; type=contig; length=3001bp
GGAATCGAATATCTTGGATTCGAAAAGCTAACATTTTTCCCCATTCAGGT
ATGCTATTGATTTCCTTATACCATTATGTATGAAGCCTGTGCTTCTCTGA
GTCTTGGATTCATCAGTTTTCTTCAAGTATCTCTAAACCGTGTCTAACGC
ATATCTGAACAAGAGTATTAGGATACCTAAATTCCGGATCGAAGAAATAT
ATAGAAGGTCAATGAAAATAATTGATCTGGACATAATGTATTTGGTTGGG
TCGCTTCGGTTTTCTATGGCATTTGATTTCGATCGATTTGGCTATGGAAT
TCAACTGGTTTTGGTTTGACTTGAAAAAATTAGATTCCAAAACCAAATCA
AACAGAACTGATACCATTTGTAATTGAACAACCTTGAGTGCAAATTCCAT
TACATGGAAATGGCTTTACCTATGGAAATGGCTTTACCTAAAATTATGGT
GTCTTGTGTGCCAAAACACATGATTCAATTAAAAGATTTTTCCTGTATCA
GAGATTTCATTTTTTCTGGGATTTGTGTACTATTTTCAGGAAAAGCTATC
ACAGCATTTCCTATAGAATCTCTTTCCCAGCTTCTAAAAGTGGTAAAAGT
TGATTTGGTTTAAAGCCTCCCCAGGCCCCTACATTAAACCATGAAAGAAC
CCAGAGTTTGTTTTCTTAAGGTATGGATTTATGTTCAGTCATTGCTTCAT
AAGCATGGAGTATATGGTGAAAATGTTTGACAAATGTCAGCATTTTTACT
GTCATACAGCAGCTTGCTTGTCCTTGGTCAACAACTTGGAAACAGGAGTA
TTTTGGGGCTTACATTATCCTATTAGCCCCTAACAAGAGAAGGTGAAAGT
GACCCGGCAGCTTTAGCAAAAGCTAGCAGAAAGTCAGTACTGGAGTGGAG
CTAGCTCCTCAACTGTTTGTCTATTTGTTTATGTAGGCTACCATTGAACA
TACTCCTCAACAGCCTTCCACCATGACTTCTCACCTTGTACAGAAGATGA
CTGTTCCATGTTTACTTCCAAAACTCCCCATTTTTTCAAAGTCATTCTTC
AGGAAACTATAACTCATGGGAGACTTGGGATTCCTAGAAATTTTGTGAGA
AAATATGGAAACCAGCTCTCAAGCCATGTTAAGCTTGAGGTCCCCAATGG
TGCAATATGTGTCTTTGAGTTAATTAGGCAACCTGAAATCTTAATGAAAG
TGCAGATCTACCCGGCTGCCAAAAATGCAAGCAATGCCTGCAGATCACAG
GCTGATAATAGCATTGCCAGTCAACTTAGAACCGGGAGCTTGGTCAGTGT
TACTGAACCTGATTGTCAACAAACTCGATGCCCCTACAGCTCCAGTGAAC
TTAAAGACTCAAAGCTCAAAACACAAAAGAACATCGATTTCCAAAATTCA
ACAAAAGAACTTAAGGGTGAATTCAGATGTTTAGCAAAAAATGATAATGG
AGGGGTTTCAGGTGATTGGGGATGTCTGAAACCTGACCTTGTGAGCAAGA
TGCAACCATTGACTCCAACTGAGAAACAAAGAGCTACTGATATTGCAAGT
TGGTCTTCCTTAAGATTAGAAGAAAATGAGAATCAATTCTCCTAATCAAC
ATGGACAAAATTCAAAGTTAGAGGTTTTATCTTCAGGCATTAGCTCTGAT
GCTCAGAGAAGTGTGACAACTGAGGCTTTAAGTTGTGTGCAACGGCTGAC
AGCCATTGAAAAGGCGCATGCTGTTCAGATAGCTAGTGCTTTTGAAAGTA
CTGAAAACCCAGTTTTTATGATAGTCATGCGACCATCATACGTTCTTGGT
AAATGCAGAATGTTTATACCATCGAACTTCACAAGGAAATTTTTGACAAT
GTACAAGTGTAATCTGACCTTGTGCAATTCCACTGGGAAAACTTGGCATG
CCAAGTTCTTTAGATATCCAGAAAATAAAAAACCAAATGCACACCTCTAC
GGTGGGTGGTGTGAATTTGTGGAAGATAATCATCTTAATGTTGGTGACAT
TTGTGTTTTTGAGCTAATTAAGCATCCTGAAATCTTAATGAAAGTGCTAA
TCTATCCGGTTGTCAAAAATGCAAGCAAGGCCTGCGGGCCACAAGCTCTC
GGGAGCATAGTCAGTCGAGTTAAAACTAGGAGCTTGGTCAGTGATGCTAA
ACGTAGTTGTCAACAAAGTGCACGTCCCCCCAGCTCCAGAGAATTTATAG
ACCTAACAGACTCGTACATTGAGAGCTTGGATGACTCTCCACTAGACCAG
AAAACGAAGAAGAAAATGACATCTCCAAGTTTTCAGCCTTGTAAGTTGAT
GAGAACCAATCCAAGTGAAAGCAATCAAGCTAAGGGGATTAAGCTGGAGA
AAGAAAAGAAGAGCTTGAATTTCCAATATTTAACAAAAGAAGTTGGAGGT
GAACTCAAATATTCTGTAAGGAATGATAGGGAAAGGAGGTCAAGTGCACG
GAGATGTCCGAAACCTGATCCTGTATACGGGAAACAAAGAGCTTGCGTAG
GAGCTAGTGCTTTCAGAACTTCAAATCCCTCTTTCAGTGTTGTGATACAT
CCGTCATACATTGGTTCTTCTAGTTCTCTGCATATACCGGTGGAATTTGT
CAAGAGATATTTGAAGAAAAGCGGAGAAATGGTGCTGAGAGTTGTAGATG
GGAGGATTTGGATAGTTGAGTACAGAAGAAAAGCAAGTAATAAAGGTGGA
AAAGCAAAGTTTGGGAGTAGGAGTTGGGGACAGTTTGCGAAAGACAATCA
ACTGGAGGTGGGAGACGTTTGTGTGTTTGAGCTGATGAATGAAAATGGAA
ACTTGTTGGAAGTCGCCATTCATCGCAAGCATTTACTCATCGAAATTGCT
TAACTGAAAAAACACAAGTCAAAGTATTTTAATCCAAATTGGAGCTGTTT
GATGAAGTTGACAACCAACATTGTATTTGATGGTTTGTTCTTGGAGCTAT
TTTAGATTTATTATGCTTATTATTATTTACTAATTTTTAATATCGCATAC
A
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding