g.barbadense_cottongen_reftransV1_0095074, g.barbadense_cottongen_reftransV1_0095074 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.335e-15 Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 1588 SPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061 +PN NS + G RS E+ S +R +TA E+ AV A FE T NP F +V+RPSY+ C M++PS F K+L+ + L K W + K A GW EF +N++ GD+CVFEL++ + +++V + V Sbjct: 74 NPNPEEVNSS----TPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPT-NPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKL-QLGEKQWPVRCLY----KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRV 222 HSP 2 Score: 70.8626 bits (172), Expect = 4.518e-12 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++RA A F +NP F VV+ PSY+ +++P F ++YL + + + W V + K G+AKF S+ W +F +N + GDVCVFEL+ +LEV R Sbjct: 112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.272e-14 Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 1591 PNQHGQNSK----LEVLSSGISSD--AQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061 P + G+ K E+ SS D RS E+ S +R +TA E+ A+ A FE T NP F +V+RPSY+ C M++PS F K+L+ K W + K A GW EF +N+L GD+CVFEL++ + ++KV + V Sbjct: 180 PKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPT-NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI-SGFIKVQLAEKQWPVRCL----YKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337 HSP 2 Score: 69.3218 bits (168), Expect = 5.034e-11 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++RA A F +NP F VV+ PSY+ +++P F ++YL + + + W V + K G+AKF S+ W +F +N L GDVCVFEL+ +L+V R Sbjct: 227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica GN=Os11g0197600 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.497e-12 Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVV 2064 S QR +T +S + +T EK HA+Q A F+S +NP + +M SYV M IP F R+ L +TL + GK W + Y + + GGW +F N+L D+CVFEL++ I KV IY VV Sbjct: 261 SKGQRQLT--VISQRRPVTEAEKDHALQRAREFKS-KNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSD--RSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNI--KVHIYRVV 393 HSP 2 Score: 68.1662 bits (165), Expect = 1.524e-10 Identity = 83/359 (23.12%), Postives = 142/359 (39.55%), Query Frame = 1 Query: 1807 RMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLD--------------DSPLDQKTKKKMTSPSFQPCKLMRT--NPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG--KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMV-LRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 RM IPS+F + ++L + +G W A+ E GW EFV DN + G VF K + + V + S + I+ + A + ++ A P+ +E +T +D ++ + + +++K S K+ T N + + + KS N +L + + GE+ R + + + PV K A A F++ NP ++ SY+ ++IP EFV+ L + + + L G+ W V Y + G G WG+FA N LE DVCVFEL+ ++ ++V I+R Sbjct: 44 RMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEG----FFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMA--PALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGG---WGKFAVGNNLEKFDVCVFELVQKDN--IKVHIYR 391
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1235_ORYSJ (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica GN=Os01g0723500 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.451e-8 Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAH--LYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKA 2082 + E+ A +IA AF S P +I M +V M P+ F+R+ L + ++ L + GK W + PN L GWC F N L GD CVFEL+ E +V I+ VV+ A A Sbjct: 267 VATAERQRATEIAHAFRSP-LPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLYI-------PNTRDRLSRGWCAFARGNCLEEGDYCVFELVAAAEF--RVHIFRVVEPAVPA 387
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.485e-8 Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 1756 NPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELI 2019 NP F ++ S++ K +M+IP F + + +S GK+W + + + KK +A GW EF DN L VGD CVFEL+ Sbjct: 53 NPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDA----GWSEFAVDNRLLVGDACVFELV 136
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.149e-8 Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 1675 ALSCV----QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMF-IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058 L+C+ RLT ++K A S E P++ ++R S V GK + I + +L + N+TL GK W R + + L GW F ++N+L VGDIC+FEL+K E M V I P Sbjct: 900 VLNCILPKHTRLTDMQKQQLESKVGAIHS-EIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTL-QRHGKNWEV-LCRTKDTR--TKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIP 1027
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: K4B4X6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g021260.1 PE=4 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 8.136e-22 Identity = 113/397 (28.46%), Postives = 173/397 (43.58%), Query Frame = 1 Query: 1690 QRLTAIEK--AHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVK----TRSLVSDAKRSCQQSARPPS-SREFIDLTDSYIESLDDSPLDQKTKKKM-----TSPSF----QPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL-LEVAIHR 2826 Q T +EK + A Q A AF+S +NP + M+PSYV + IP F RK+ NL L +W K N K + GW FV+DN L VGD+CVFE++K ++ + V+I+ +A G + +IV+ V ++ V K+S Q + + + + E L P + +K+K PSF Q C++ + + +EKE + Q A AF+ NP + PSY+ +S +L IP++F ++Y L+ +G +VLRV W V+ +N K GS W F +DN+L+VGDVCVFE++ G L ++V I R Sbjct: 160 QNKTVMEKESSTAYQQAKAFKS-KNPFIISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTNGKVGS----GWKAFVQDNKLKVGDVCVFEVLK-GQLFVDVIIF-------RAAGSTLMHNIVAEVPRVPCSQPKVVQTKKSKQHTGGSYGLNLKIKEEQGEGTEILGHCPSGRGSKRKQPEVDAVVPSFTKKAQNCRIHKKDSKSVYDQNKTVMEKESSTAYQQ------------------------------------------AKAFKYKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTN----GKVGS-GWKAFVQDNKLKVGDVCVFEVL--KGQLFVDVIIFR 494 HSP 2 Score: 112.464 bits (280), Expect = 8.564e-22 Identity = 112/397 (28.21%), Postives = 173/397 (43.58%), Query Frame = 1 Query: 1690 QRLTAIEK--AHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVK----TRSLVSDAKRSCQQSARPPSSREFIDLTDSY-IESLDDSPLDQKTKKKMTS-----PSF----QPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL-LEVAIHR 2826 Q T +EK + A Q A AF+ +NP + M+PSYV + IP F RK+ NL L +W K N K + GW FV+DN L VGD+CVFE++K ++ + V+I+ +A G + +IV+ V ++ V K+S Q + I + E L P + +K+K + PSF Q C++ + + +EKE + Q A AF++ NP + PSY+ +S +L IP++F ++Y L+ +G +VLRV W V+ +N K GS W F +DN+L+VGD+CVFE++ G L ++V I R Sbjct: 376 QNKTVMEKESSTAYQQAKAFK-YKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTNGKVGS----GWKAFVQDNKLKVGDVCVFEVLK-GQLFVDVIIF-------RAAGSTLMHNIVAEVSRVPYSQPKVVQTKKSKQHTGGSYGLNLKIKVEQGEGTEILGHCPSGRGSKRKQSEVDAVVPSFTKKAQNCRIHKKDSKSVYDQNKTVMEKESSTAYQQ------------------------------------------AKAFKSKNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTN----GKVGS-GWKAFVQDNKLKVGDICVFEVL--KGQLFVDVIIFR 710 HSP 3 Score: 78.5666 bits (192), Expect = 1.948e-11 Identity = 52/149 (34.90%), Postives = 73/149 (48.99%), Query Frame = 1 Query: 1621 EVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYV---LGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058 E L G Q+S + C+ + A E A Q A AF S ENP F+ M+PSYV G ++ I S+ RKF + + ++ L S+ + W K A GW EFV DN L VGD+C+FE P ++ V+I+P Sbjct: 1173 EELREGTLRHGQQSTSF----CMGTVVAKEMVLAYQKAKAFTS-ENPFFLSFMQPSYVSLARGPIQLSIASSVARKFFSTRQSDVVLEVSSKRRWTVKC----SVGIKTAKFSCGWKEFVVDNKLKVGDVCIFEWTGRPNLVFNVIIFP 1312 HSP 4 Score: 78.1814 bits (191), Expect = 2.644e-11 Identity = 92/335 (27.46%), Postives = 137/335 (40.90%), Query Frame = 1 Query: 1690 QRLTAIEK--AHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVK----TRSLVSDAKRSCQQSARPPS-SREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVE 2670 Q T +EK + A Q A AF+S +NP + M+PSYV + IP F RK+ NL L +W K N K + GW FV+DN L VGDICVFE++K ++ + V+I+ V G + +IV+ V ++ V K+S Q + + + + E L P + +K+K QP E + +F TK+ GG + + + QR A AF++ NP + PSYI L I F ++Y L+ G +VLRV W V+ Sbjct: 592 QNKTVMEKESSTAYQQAKAFKS-KNPFTISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTNGKVGS----GWKAFVQDNKLKVGDICVFEVLK-GQLFVDVIIFRV-------AGSTLMHNIVAEVPRVPCSQPKVVQTKKSKQHTGGSYGLNLKIKEEQGEGTEILGHCPSGRGSKRK------QP-------------------EVDAVVSSFTRKTKKSGGSCGLHKKQSKIVYDKNKTVTDKKSSIAYQR----AKAFKSKNPFIVSFMQPSYISKHYILKIWSAFARKYFLENDGNLVLRVSGSGSWSVK 884 HSP 5 Score: 72.0182 bits (175), Expect = 1.938e-9 Identity = 69/229 (30.13%), Postives = 110/229 (48.03%), Query Frame = 1 Query: 2176 PPSSREF----------IDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRY-LKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNL-LEVAIHR 2826 P SSR F IDL++S ++ ++D+P QK K+K+ S + N +K + + S +F TK+V + + + K +Q A AF++ NP + PSY+ +S +L IP++F ++Y L+ +G +VLRV W V+ +N K GS W F +DN+L+VGDVCVFE++ G L ++V I R Sbjct: 72 PYSSRTFHFHETHHAPIIDLSESDVDIMEDTPRRQKLKEKVVDHSLE-------NLCYGQISKRKRHGDDVASPSF---TKKVQNCRIHKKDSKSVYDQNKTVMEKESSTAYQQ-----AKAFKSKNPFIISFMQPSYVSASFNLSIPLKFARKYFLENNGNLVLRVPGIGSWSVKCTLGMTN----GKVGS-GWKAFVQDNKLKVGDVCVFEVL--KGQLFVDVIIFR 278 HSP 6 Score: 69.707 bits (169), Expect = 1.094e-8 Identity = 40/109 (36.70%), Postives = 58/109 (53.21%), Query Frame = 1 Query: 2503 ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 A AFR+ NP + PSY+ +LH+ + ++YL +K G++VLR W V+Y G+ + SW F DN+L+ GDVCVFEL+ L+V I R Sbjct: 1009 AKAFRSKNPFVIYFMQPSYVSRPYNLHMTFSYAQKYLWEKCGDLVLRAAGRGSWSVKYDLGLPE--GRIRL---SWRAFVLDNKLKSGDVCVFELIKGTQPFLDVIIFR 1112
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2MI58_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G020000 PE=4 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 8.842e-22 Identity = 67/177 (37.85%), Postives = 89/177 (50.28%), Query Frame = 1 Query: 1687 VQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYV----LGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDL 2205 +Q+L EK A++ AS +ENP F++VM+PSYV R+ IP+NF RK L C++TLCNS+GKTW F KK ++L GW FV DN++ VGD C FELI EI V+IY GP + + ++ KR Q A P S L Sbjct: 213 IQQLKPHEKDDALERASKTFKSENPFFLVVMQPSYVGLSHSKGYRLAIPANFVRKHLMKELCSITLCNSSGKTWIVTFKNNQIGKKQTSYLLTGWGTFVHDNNVRVGDACAFELINSIEISFNVVIYQ---------GPHT--KCYQSLSSTDIIRPMKRKDQSYASPSGSETLTAL 378 HSP 2 Score: 93.5893 bits (231), Expect = 2.471e-16 Identity = 61/134 (45.52%), Postives = 76/134 (56.72%), Query Frame = 1 Query: 1690 QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYP-ENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY--PVVKNASKA 2082 + LTA+EKA A Q+ASAF+S E P F+ V++PSY RM IP F RK+L L S GK+W + ++ E+ NA GW F DN L VGD CVFELI E MKV IY VK++S A Sbjct: 373 ETLTALEKAKAFQVASAFKS-EYPFFISVLQPSYSR---RMNIPVIFARKYLAKMHKEAILLLSNGKSWPVIYCQHKIESTGANAIFGSGWRRFSHDNKLEVGDSCVFELIMAAETSMKVTIYKKQAVKDSSLA 502 HSP 3 Score: 84.3445 bits (207), Expect = 1.722e-13 Identity = 90/322 (27.95%), Postives = 141/322 (43.79%), Query Frame = 1 Query: 1849 MYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGAS-AFRTSNPSFSVVIHPSYIGSSSS----LHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAK--FGSRSWGQFAKDNQLEVGDVCVFELMN 2790 ++K LT CN GK W GW EF L+ G + VF + V+I+ + A++ P + + R RS + +K D +L+D +K ++K P QPCK+M + +N A ++E + KS ++L +++ E + D+ R + KP + K A AS F++ NP F VV+ PSY+G S S L IP FV+++L K + L G+ WIV ++ +N+ GK + + WG F DN + VGD C FEL+N Sbjct: 63 VWKVELTKCN--GKIW----------------FENGWLEFSNHYSLDFGHLLVFRYDGNSN--FHVVIFD--RTATEILYPYTRYNHIHR---RSNIDKSK------------------DDDSTPNLEDISTSRKLREKSQMPCPQPCKMMHS----TNSAIKTEIECDGKS---EFLAQQIRYEGCPARNGDKSTRHRVIQQLKP---HEKDDALERASKTFKSENPFFLVVMQPSYVGLSHSKGYRLAIPANFVRKHLMKELCSITLCNSSGKTWIVTFK---NNQIGKKQTSYLLTGWGTFVHDNNVRVGDACAFELIN 328 HSP 4 Score: 81.2629 bits (199), Expect = 1.787e-12 Identity = 49/119 (41.18%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKK-SGEMVLRVVDGRIWIVEY-RRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKH 2832 K +A ASAF++ P F V+ PSY S ++IPV F ++YL K E +L + +G+ W V Y + K + G A FGS W +F+ DN+LEVGD CVFEL+ ++V I++K Sbjct: 380 KAKAFQVASAFKSEYPFFISVLQPSY---SRRMNIPVIFARKYLAKMHKEAILLLSNGKSWPVIYCQHKIESTGANAIFGS-GWRRFSHDNKLEVGDSCVFELIMAAETSMKVTIYKKQ 494 HSP 5 Score: 68.5514 bits (166), Expect = 1.567e-8 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 996 DDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178 +D F S +PHFFK+ILQ+TI +G+LG+PR FV+ GN +SS L VP+G + EL + Sbjct: 10 NDHLKFISNSPHFFKIILQDTIQNGKLGVPRKFVKNQGNSMSSPAMLSVPSGEVWKVELTK 70
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A061DGP3_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000518 PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.263e-21 Identity = 52/120 (43.33%), Postives = 80/120 (66.67%), Query Frame = 1 Query: 2464 PDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 P + K RA + AS+FR+ NP F VV+ P+Y+G+ S++IP +F KR++ +K ++L+V +GR WIV++ K +N G + +W FA+DN LEVGDVCVFEL+N + +V+I Sbjct: 400 PLSSHEKARAMLRASSFRSENPFFKVVMQPAYLGARCSVNIPYKFAKRHVDEKEDRVILQVSNGRRWIVKFSVKVTNSGQRKARFYDTWRAFAQDNNLEVGDVCVFELINRDETSFKVSI 519 HSP 2 Score: 104.375 bits (259), Expect = 5.906e-20 Identity = 99/342 (28.95%), Postives = 152/342 (44.44%), Query Frame = 1 Query: 1828 FTRKFLTMYKCNLT----LCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQR---ACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 F RKF+T Y +L+ L +G TWH + + + L GW EF E L G VF+ + +VLI+ + +AS+ P ++ D CQ+ P+ E D D +E L ++P +KT++ +P +P K++R + + K + E S YL +V P+ +G A ASAF++ N F V + PSYI L +P F+ + LK K G++ L +DG+ W +Y +NK KA W F +DN+LE+GDVCVFEL+ + LL+V I+R Sbjct: 43 FPRKFVTKYGDSLSSPVLLMVPSGSTWHVELIK----SDGDVWLQNGWKEFAEHYSLKHGHFLVFKY--QGDCNFQVLIFDM--SASEIEYPHISPNM-----------DRDEVCQE----PNKEE--DAKDDSVEVLYETPRVRKTRQNSQTPCLRPRKILR----RTTLSDKYKRDCEDVSSGEGYLKTKV---------------------PRGRHAFGDNENATALQRASAFKSENFFFVVEMQPSYINPGRKLCLPSSFITKCLKEKVGDVTLCTLDGKTWPAKYCCYLTNNKYTKAALHC-GWTAFMQDNKLELGDVCVFELIEQTKILLKVIIYR 333 HSP 3 Score: 103.219 bits (256), Expect = 1.501e-19 Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 1 Query: 1708 EKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 E A A+Q ASAF+S EN F++ M+PSY+ ++ +PS+F K L ++TLC GKTW AK+ Y NK A L+ GW F++DN L +GD+CVFELI+ +IL+KV+IY V +++S Sbjct: 217 ENATALQRASAFKS-ENFFFVVEMQPSYINPGRKLCLPSSFITKCLKEKVGDVTLCTLDGKTWPAKYCCYLTNNKYTKAALHCGWTAFMQDNKLELGDVCVFELIEQTKILLKVIIYRVSQDSS 339 HSP 4 Score: 86.2705 bits (212), Expect = 3.986e-14 Identity = 47/121 (38.84%), Postives = 70/121 (57.85%), Query Frame = 1 Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKF-FRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 L++ EKA A+ AS+F S ENP F +VM+P+Y+ +C + IP F ++ + + + L S G+ W KF + + + A Y W F +DN+L VGD+CVFELI E KV I+ Sbjct: 401 LSSHEKARAMLRASSFRS-ENPFFKVVMQPAYLGARCSVNIPYKFAKRHVDEKEDRVILQVSNGRRWIVKFSVKVTNSGQRKARFYDTWRAFAQDNNLEVGDVCVFELINRDETSFKVSIF 520 HSP 5 Score: 74.7146 bits (182), Expect = 1.626e-10 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 3 Query: 1005 SMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178 SMFT KTPHFFK+IL++TI H +L PR FV KYG+ LSS V L VP+G+ ELI+ Sbjct: 18 SMFTPKTPHFFKIILEDTIRHSKLRFPRKFVTKYGDSLSSPVLLMVPSGSTWHVELIK 75
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: G7KVW7_MEDTR (Transcriptional factor B3 family protein OS=Medicago truncatula GN=MTR_7g050720 PE=4 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 5.355e-21 Identity = 107/377 (28.38%), Postives = 157/377 (41.64%), Query Frame = 1 Query: 1729 IASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFL-----TMY-------KCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVG-------ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL----KKSGEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELM 2787 +A+ F T F I+ S GK + IP F K+ +Y K L L S GK W K GW EFV+ + L+ G + +F+ + + + ++ +K S ++KR P + E DL D YI S KK+ T+ SF+ P E + + K +K ++ K+ G L ++ GKQ A A++ RT NPSF V+HPSYI ++ +LHIP EF KR+L KK G++ LR+++G++W Y RK + KG K + S W FA+DN L+VGDVC FEL Sbjct: 1 MANEFPPTH--FFKIICDQSLHQGK--LIIPRKFVEKYGEGLSNAIYLKTPNGAKWKLNLVKSDGKIWFEK----------------GWKEFVKYHSLSQGHLLLFKYGRTSHFHVHIFDKSALE-----------------IKYPSQRVESKRVSNDLGNKPQNDE--DLED-YIAS----------KKRKTNLSFE-----FNQPYEIGSNSCVNVGKLEKVAALNHIDKKCKGCLNFA---------------------GKQLAIAKKVTTFDRANSMRTCNPSFIAVMHPSYIDAACNLHIPSEFGKRHLLGLGKKKGDIHLRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFELF 301 HSP 2 Score: 69.3218 bits (168), Expect = 2.861e-9 Identity = 51/172 (29.65%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 1576 MRINSPNQHGQNS-----KLEVLSSGISSDAQ----RSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMY---KCNLTLCNSTGKTWHAKFFRYPENKKPNA-HLYGG-WCEFVEDNHLNVGDICVFELIKHPEILMKVL 2049 N P + G NS KLE +++ D + + + L+ +++T ++A++++ T NP F+ VM PSY+ C + IPS F ++ L K ++ L GK W A++ N+K +Y W F EDN+L VGD+C FEL IL ++ Sbjct: 147 FEFNQPYEIGSNSCVNVGKLEKVAALNHIDKKCKGCLNFAGKQLAIAKKVTTFDRANSMR-------TCNPSFIAVMHPSYIDAACNLHIPSEFGKRHLLGLGKKKGDIHLRLLNGKVWPARYLIRKGNRKGEKFEMYSSEWKTFAEDNNLKVGDVCTFELFPTSTILTFIV 311
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A067K133_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18412 PE=4 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 1.080e-19 Identity = 61/184 (33.15%), Postives = 98/184 (53.26%), Query Frame = 1 Query: 1525 NKELLILQVGLP*D*KKMRINSPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 +K + + + LP KKM++ +P + + + G + Q+ + Q LT KA+A+ A ++NP FM+VM+PSYV +M+IP F R++L + + ++ L G+TW + + K N L GGW +F DNHL VGD+CVFEL+ +KV+I+ K+AS Sbjct: 168 HKNMKLENLTLPETCKKMKLENPTRKNEAKR------GSCGEKQKFIWR-----TQPLTKNYKANALHRARTAFKSKNPFFMVVMQPSYVHAGNKMWIPERFARRYLKIKRGDVILIVMGGRTW-SIIYHCNNKTKLNPRLCGGWTKFSHDNHLEVGDVCVFELVNPAITKLKVVIFRYSKDAS 339 HSP 2 Score: 100.138 bits (248), Expect = 4.312e-19 Identity = 108/375 (28.80%), Postives = 162/375 (43.20%), Query Frame = 1 Query: 1741 FESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQ-QSARPPSSREFID--LTDSYIESLDDSPLDQKTK----KKMTSPSFQPCKLMR-TNPSESNQAK-GIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLK-KSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSR---SWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 FE+ + P F+ ++ + K ++ P F RK+ ++ L + W + + L GW EFVE L VG + VFE + V+I+ K+A + P T ++ ++ K + + A+ S E +D L I SPL K + +T P + CK M+ NP+ N+AK G EK+K Q LTK Y +AF++ NP F VV+ PSY+ + + + IP F +RYLK K G+++L V+ GR W + Y + K K R W +F+ DN LEVGDVCVFEL+N L+V I R Sbjct: 13 FEANK-PHFLKIVLADTIRDK-KLVFPRKFVRKYGNNLPSSIVLTVPSCAKWQVELIK----SDGEIWLQNGWQEFVEYYALTVGSLLVFEYDER-NCRFNVIIFD--KSALEINYPY----------TVNVENEGKGTNNPEEAKYDVSYESLDEVLPSRKIMEESPSPLPNPHKNMKLENLTLP--ETCKKMKLENPTRKNEAKRGSCGEKQKFIWRTQPLTKN----------------------------YKANALHRARTAFKSKNPFFMVVMQPSYVHAGNKMWIPERFARRYLKIKRGDVILIVMGGRTWSIIY-----HCNNKTKLNPRLCGGWTKFSHDNHLEVGDVCVFELVNPAITKLKVVIFR 333 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 6
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
InterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0095074 ID=g.barbadense_cottongen_reftransV1_0095074; Name=g.barbadense_cottongen_reftransV1_0095074; organism=Gossypium barbadense; type=contig; length=3001bpback to top |