g.barbadense_cottongen_reftransV1_0095074, g.barbadense_cottongen_reftransV1_0095074 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana GN=REM19 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.335e-15 Identity = 53/159 (33.33%), Postives = 79/159 (49.69%), Query Frame = 1 Query: 1588 SPNQHGQNSKLEVLSSGISSDAQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061 +PN NS + G RS E+ S +R +TA E+ AV A FE T NP F +V+RPSY+ C M++PS F K+L+ + L K W + K A GW EF +N++ GD+CVFEL++ + +++V + V Sbjct: 74 NPNPEEVNSS----TPGGDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPT-NPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKL-QLGEKQWPVRCLY----KAGRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFRV 222 HSP 2 Score: 70.8626 bits (172), Expect = 4.518e-12 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++RA A F +NP F VV+ PSY+ +++P F ++YL + + + W V + K G+AKF S+ W +F +N + GDVCVFEL+ +LEV R Sbjct: 112 RERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.272e-14 Identity = 55/164 (33.54%), Postives = 80/164 (48.78%), Query Frame = 1 Query: 1591 PNQHGQNSK----LEVLSSGISSD--AQRSVTTEALSCVQR-LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPV 2061 P + G+ K E+ SS D RS E+ S +R +TA E+ A+ A FE T NP F +V+RPSY+ C M++PS F K+L+ K W + K A GW EF +N+L GD+CVFEL++ + ++KV + V Sbjct: 180 PKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERAINAAKTFEPT-NPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGI-SGFIKVQLAEKQWPVRCL----YKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRV 337 HSP 2 Score: 69.3218 bits (168), Expect = 5.034e-11 Identity = 39/115 (33.91%), Postives = 60/115 (52.17%), Query Frame = 1 Query: 2482 KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++RA A F +NP F VV+ PSY+ +++P F ++YL + + + W V + K G+AKF S+ W +F +N L GDVCVFEL+ +L+V R Sbjct: 227 RERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPV----RCLYKAGRAKF-SQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica GN=Os11g0197600 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.497e-12 Identity = 51/140 (36.43%), Postives = 71/140 (50.71%), Query Frame = 1 Query: 1645 SDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVV 2064 S QR +T +S + +T EK HA+Q A F+S +NP + +M SYV M IP F R+ L +TL + GK W + Y + + GGW +F N+L D+CVFEL++ I KV IY VV Sbjct: 261 SKGQRQLT--VISQRRPVTEAEKDHALQRAREFKS-KNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSD--RSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDNI--KVHIYRVV 393 HSP 2 Score: 68.1662 bits (165), Expect = 1.524e-10 Identity = 83/359 (23.12%), Postives = 142/359 (39.55%), Query Frame = 1 Query: 1807 RMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLD--------------DSPLDQKTKKKMTSPSFQPCKLMRT--NPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYG--KQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMV-LRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 RM IPS+F + ++L + +G W A+ E GW EFV DN + G VF K + + V + S + I+ + A + ++ A P+ +E +T +D ++ + + +++K S K+ T N + + + KS N +L + + GE+ R + + + PV K A A F++ NP ++ SY+ ++IP EFV+ L + + + L G+ W V Y + G G WG+FA N LE DVCVFEL+ ++ ++V I+R Sbjct: 44 RMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEG----FFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGIDKISTFSAHPSKNVIIKTESDEGGMVTAAITTEKMA--PALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSKSPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGG---WGKFAVGNNLEKFDVCVFELVQKDN--IKVHIYR 391
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y1235_ORYSJ (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica GN=Os01g0723500 PE=3 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.451e-8 Identity = 43/131 (32.82%), Postives = 60/131 (45.80%), Query Frame = 1 Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAH--LYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKA 2082 + E+ A +IA AF S P +I M +V M P+ F+R+ L + ++ L + GK W + PN L GWC F N L GD CVFEL+ E +V I+ VV+ A A Sbjct: 267 VATAERQRATEIAHAFRSP-LPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLYI-------PNTRDRLSRGWCAFARGNCLEEGDYCVFELVAAAEF--RVHIFRVVEPAVPA 387
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y6112_ORYSJ (B3 domain-containing protein Os06g0112300 OS=Oryza sativa subsp. japonica GN=Os06g0112300 PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.485e-8 Identity = 31/88 (35.23%), Postives = 46/88 (52.27%), Query Frame = 1 Query: 1756 NPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELI 2019 NP F ++ S++ K +M+IP F + + +S GK+W + + + KK +A GW EF DN L VGD CVFEL+ Sbjct: 53 NPFFTALIAKSHLHPKFQMWIPPRFQHRLAEPEARTAAVLHSGGKSWATSYCGHLKMKKLDA----GWSEFAVDNRLLVGDACVFELV 136
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Match: Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica GN=Os03g0621600 PE=3 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 6.149e-8 Identity = 44/133 (33.08%), Postives = 64/133 (48.12%), Query Frame = 1 Query: 1675 ALSCV----QRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMF-IPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYP 2058 L+C+ RLT ++K A S E P++ ++R S V GK + I + +L + N+TL GK W R + + L GW F ++N+L VGDIC+FEL+K E M V I P Sbjct: 900 VLNCILPKHTRLTDMQKQQLESKVGAIHS-EIPIYGCILRKSRVHGKSQTVDICREYADVYLPFKELNMTL-QRHGKNWEV-LCRTKDTR--TKRLSTGWSRFAQENNLQVGDICLFELLKKKEYSMNVHIIP 1027
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A5BWP2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_008016 PE=4 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.477e-28 Identity = 138/487 (28.34%), Postives = 203/487 (41.68%), Query Frame = 1 Query: 1630 SSGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCR--MFIPSNFTRKFLTMYKCNLTLCNSTGKTWHA--KFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDI--------------------CVFELIKHPEILM---------KVLIYPVV-----------------KNASKACGPQALGS---------------IVSRVKTRSLV----SDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMR--TNPSESN---------QAKGIKLEKE----KKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGE-MVLRVVDGRIWIVEY--RRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRK 2829 S G + QR+V + L V TA ++ A+Q A AF + ENP F M PSY LG R + IP F ++ ++TL S G+TW + R K+ LY GW FV+DN L +GD+ C F I + +L+ VLI+ + N + C P L K ++ S+ + S +++ P ++ + D ++S D P T+ K QP + R T P N Q G+K EK + +NF KE GGE + + + + K A + A +F+ NP F V + PSY+G+ ++ IP+ FVKR+ + LRV + R W ++Y RR+ AK S W +FA+DN L+VGDVCVFEL+N NLL+V I RK Sbjct: 285 SCGTVAAIQRNVLSGVLPPV---TASKEVGALQRAIAF-NPENPFFRAKMGPSY-LGPSRHGLNIPIWFVERYFKTDDKSITLWGSDGRTWSTSYRLGRRRNGKRVAELLYSGWKIFVQDNQLKLGDVCVFVLIKSPGILLKGGWQEFCEFYSIGYGHLLLFRYEGXSHFHVLIFDMTASEIEYPSSNATHDEKPNNNNGVCQPSILKENHENDVSVEILDDFPASQTTKEEDIINITSSEEEFSTNEASSLPKLKD--NKRDVSVQSFHDGPPSHNTRMKTKLACLQPNERRRNITPPKTFNTSBXQSKGIQGTGMKFEKSTPEFRDKVNFD--AKE-GGEGRATAQRGIISQXVPAVTASK-----KVGALLRAESFKPQNPFFIVTMRPSYVGTGXNMXIPLRFVKRHFTTDDKKTTLRVSNRRTWTLKYCIRRR------DAKLSS-GWRKFARDNYLQVGDVCVFELINSTANLLKVVIFRK 749
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A061DG54_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000516 PE=4 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 5.097e-27 Identity = 82/189 (43.39%), Postives = 104/189 (55.03%), Query Frame = 1 Query: 1570 KKMR-INSPNQHGQNSKLEVLSSGISSD---AQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGK--CRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY--------PVVKNASKACGPQ 2094 K MR NS N+ N K E L D A++ + + +Q+L A KA A+Q A AF+S ENP F++VM+PSYV K CR+ IP+NF RK L C + LCNS GKTW F + +K NA L GW F DN++ VGD+CVFEL EI KV IY PV +NA K+ Q Sbjct: 171 KMMRSTNSANKTESNLKSESLFPQFRHDGSPARKGDKSTSRHRIQKLKADNKAKALQRARAFKS-ENPFFLLVMQPSYVGFKSTCRLAIPNNFVRKHLMKEDCVVNLCNSNGKTWTVSFHCREKERKLNASLQSGWKTFANDNNIQVGDVCVFELTNCIEISFKVCIYQGKTDVFHPVKRNAGKSSTGQ 358 HSP 2 Score: 87.4261 bits (215), Expect = 1.783e-14 Identity = 55/120 (45.83%), Postives = 74/120 (61.67%), Query Frame = 1 Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 L A EKA A+QIASAF S ENP F +V++PSYV ++ +P F RKF + L S GK+W K++++ + P+A L GW +FV DN L VG++CVFEL + E KV IY Sbjct: 364 LNAFEKAKAIQIASAFRS-ENPSFAVVLQPSYVHLN-KLSVPEKFARKFFKKKHNEVILRLSNGKSWPVKYYQHSI-RTPSAKLCNGWRKFVLDNKLEVGNVCVFELTEGIETSFKVTIY 480 HSP 3 Score: 84.7297 bits (208), Expect = 1.290e-13 Identity = 94/351 (26.78%), Postives = 148/351 (42.17%), Query Frame = 1 Query: 1747 STENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIG--SSSSLHIPVEFVKRYLKKSGEMV-LRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMN 2790 +TE+P F ++ P L ++ IP+ F +K+ L G+ W + + L GW EF+ L G VF V+I+ ++AS+ P + Q P E + D+ I+ L+D +KT++K +P K+MR+ S + +K E SL Q+ + G + ++ R K D K +A A AF++ NP F +V+ PSY+G S+ L IP FV+++L K +V L +G+ W V + + + A S W FA DN ++VGDVCVFEL N Sbjct: 15 TTESPHFFKIILPE-TLRDGKLGIPTKFVKKYGNGMSSPALLKVPNGEVWKVELTK----SDGKVWLKNGWQEFLNHYSLEYGHFLVFRY--EGNCNFHVIIFD--RSASEIEYPYT----------------SNNHGQHKELPEEKIEESE-GDNSIQILEDIAPSRKTREKSHLSCLRPHKMMRSTNSANKTESNLKSE----SLFPQF--RHDGSPARKGDKSTSRHRIQKL---KAD---NKAKALQRARAFKSENPFFLLVMQPSYVGFKSTCRLAIPNNFVRKHLMKEDCVVNLCNSNGKTWTVSFHCREKERKLNASLQS-GWKTFANDNNIQVGDVCVFELTN 326 HSP 4 Score: 75.485 bits (184), Expect = 1.099e-10 Identity = 51/127 (40.16%), Postives = 74/127 (58.27%), Query Frame = 1 Query: 2461 KPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIP-VEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLL 2838 KP + K +A ASAFR+ NPSF+VV+ PSY+ + L +P K + KK E++LR+ +G+ W V+Y + S + AK W +F DN+LEVG+VCVFEL +V I+RK + Sbjct: 362 KPLNAFEKAKAIQIASAFRSENPSFAVVLQPSYV-HLNKLSVPEKFARKFFKKKHNEVILRLSNGKSWPVKYYQH-SIRTPSAKL-CNGWRKFVLDNKLEVGNVCVFELTEGIETSFKVTIYRKQAI 485 HSP 5 Score: 74.7146 bits (182), Expect = 2.027e-10 Identity = 33/61 (54.10%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 996 DDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178 +D S FT+++PHFFK+IL ET+ G+LGIP FV+KYGN +SS L+VPNG + EL + Sbjct: 9 NDHSTFTTESPHFFKIILPETLRDGKLGIPTKFVKKYGNGMSSPALLKVPNGEVWKVELTK 69
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2TYU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071200 PE=4 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.878e-25 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 1702 AIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 AIE A+Q A +FES ENP F++ M+PSY+ +M IP NFT KFLT +LTLC S G+TW A++ Y NK A ++ GW +F+ DN+L GD+CVFELI EI++KV+IY V ++AS Sbjct: 323 AIEYDKALQRAFSFES-ENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATIHIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYRVRQDAS 447 HSP 2 Score: 105.531 bits (262), Expect = 4.659e-20 Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 2476 YGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKG-GKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 + K RA AS F++ NP F VV+ P Y+ SL IP +FV +YL ++ E +L+V DGR W+V++ K G KA+F S +W FA+DN LEVGDVCVFEL+N N N +V+I Sbjct: 486 HEKARAIQKASNFKSKNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEF-SHTWRAFARDNNLEVGDVCVFELINRNENSFKVSI 601 HSP 3 Score: 94.7449 bits (234), Expect = 1.169e-16 Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 1 Query: 1633 SGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKF-FRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQAL 2100 +SS S ++ ++ LT EKA A+Q AS F+S +NP F +VM+P Y+ +C + IP F ++L K L S G+TW KF + + A W F DN+L VGD+CVFELI E KV I+ A+ + PQ L Sbjct: 462 DNVSSSTPGSTESKHHCSIRSLTPHEKARAIQKASNFKS-KNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEFSHTWRAFARDNNLEVGDVCVFELINRNENSFKVSIFSEAPGANSSLSPQGL 617 HSP 4 Score: 80.1073 bits (196), Expect = 4.208e-12 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 2488 RACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +A A +F + NP F V + PSYI + IP F ++L + G++ L DGR W +Y NK KA W QF DN LE GDVCVFEL+++ +L+V I+R Sbjct: 328 KALQRAFSFESENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATIHI-GWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYR 441 HSP 5 Score: 68.9366 bits (167), Expect = 1.285e-8 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 993 EDDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPEILM 1196 E++ SMFT KTPHFFK+IL I +L IP FVRKYGN LS+ V L VP+G EL + I+ Sbjct: 7 ENNNSMFTPKTPHFFKIILDANIRDKKLEIPGKFVRKYGNGLSNSVLLTVPSGDTWHVELTKSDGIVW 74
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2PQB0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071200 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.540e-25 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 1702 AIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 AIE A+Q A +FES ENP F++ M+PSY+ +M IP NFT KFLT +LTLC S G+TW A++ Y NK A ++ GW +F+ DN+L GD+CVFELI EI++KV+IY V ++AS Sbjct: 312 AIEYDKALQRAFSFES-ENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATIHIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYRVRQDAS 436 HSP 2 Score: 105.531 bits (262), Expect = 6.403e-20 Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 2476 YGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKG-GKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 + K RA AS F++ NP F VV+ P Y+ SL IP +FV +YL ++ E +L+V DGR W+V++ K G KA+F S +W FA+DN LEVGDVCVFEL+N N N +V+I Sbjct: 475 HEKARAIQKASNFKSKNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEF-SHTWRAFARDNNLEVGDVCVFELINRNENSFKVSI 590 HSP 3 Score: 96.2857 bits (238), Expect = 4.570e-17 Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 1633 SGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKF-FRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRS 2133 +SS S ++ ++ LT EKA A+Q AS F+S +NP F +VM+P Y+ +C + IP F ++L K L S G+TW KF + + A W F DN+L VGD+CVFELI E KV I+ A+ + PQA S+V +++ Sbjct: 451 DNVSSSTPGSTESKHHCSIRSLTPHEKARAIQKASNFKS-KNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEFSHTWRAFARDNNLEVGDVCVFELINRNENSFKVSIFSEAPGANSSLSPQAHDVKASQVASKN 617 HSP 4 Score: 80.1073 bits (196), Expect = 5.687e-12 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 2488 RACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +A A +F + NP F V + PSYI + IP F ++L + G++ L DGR W +Y NK KA W QF DN LE GDVCVFEL+++ +L+V I+R Sbjct: 317 KALQRAFSFESENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATI-HIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYR 430 HSP 5 Score: 66.2402 bits (160), Expect = 8.923e-8 Identity = 33/63 (52.38%), Postives = 39/63 (61.90%), Query Frame = 3 Query: 1008 MFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPEILM 1196 MFT KTPHFFK+IL I +L IP FVRKYGN LS+ V L VP+G EL + I+ Sbjct: 1 MFTPKTPHFFKIILDANIRDKKLEIPGKFVRKYGNGLSNSVLLTVPSGDTWHVELTKSDGIVW 63
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2T1X1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071200 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.615e-25 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 1702 AIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 AIE A+Q A +FES ENP F++ M+PSY+ +M IP NFT KFLT +LTLC S G+TW A++ Y NK A ++ GW +F+ DN+L GD+CVFELI EI++KV+IY V ++AS Sbjct: 325 AIEYDKALQRAFSFES-ENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATIHIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYRVRQDAS 449 HSP 2 Score: 105.531 bits (262), Expect = 6.930e-20 Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 2476 YGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKGG-KAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 + K RA AS F++ NP F VV+ P Y+ SL IP +FV +YL ++ E +L+V DGR W+V++ K G KA+F S +W FA+DN LEVGDVCVFEL+N N N +V+I Sbjct: 488 HEKARAIQKASNFKSKNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEF-SHTWRAFARDNNLEVGDVCVFELINRNENSFKVSI 603 HSP 3 Score: 96.2857 bits (238), Expect = 4.327e-17 Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 1633 SGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKF-FRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRS 2133 +SS S ++ ++ LT EKA A+Q AS F+S +NP F +VM+P Y+ +C + IP F ++L K L S G+TW KF + + A W F DN+L VGD+CVFELI E KV I+ A+ + PQA S+V +++ Sbjct: 464 DNVSSSTPGSTESKHHCSIRSLTPHEKARAIQKASNFKS-KNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEFSHTWRAFARDNNLEVGDVCVFELINRNENSFKVSIFSEAPGANSSLSPQAHDVKASQVASKN 630 HSP 4 Score: 79.7221 bits (195), Expect = 6.184e-12 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 2488 RACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +A A +F + NP F V + PSYI + IP F ++L + G++ L DGR W +Y NK KA W QF DN LE GDVCVFEL+++ +L+V I+R Sbjct: 330 KALQRAFSFESENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATI-HIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYR 443 HSP 5 Score: 69.3218 bits (168), Expect = 1.219e-8 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 993 EDDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPEILM 1196 E++ SMFT KTPHFFK+IL I +L IP FVRKYGN LS+ V L VP+G EL + I+ Sbjct: 9 ENNNSMFTPKTPHFFKIILDANIRDKKLEIPGKFVRKYGNGLSNSVLLTVPSGDTWHVELTKSDGIVW 76
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2SWG4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G071200 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.716e-25 Identity = 63/126 (50.00%), Postives = 85/126 (67.46%), Query Frame = 1 Query: 1702 AIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRY-PENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNAS 2076 AIE A+Q A +FES ENP F++ M+PSY+ +M IP NFT KFLT +LTLC S G+TW A++ Y NK A ++ GW +F+ DN+L GD+CVFELI EI++KV+IY V ++AS Sbjct: 323 AIEYDKALQRAFSFES-ENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATIHIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYRVRQDAS 447 HSP 2 Score: 105.531 bits (262), Expect = 6.667e-20 Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 1 Query: 2476 YGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKG-GKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 + K RA AS F++ NP F VV+ P Y+ SL IP +FV +YL ++ E +L+V DGR W+V++ K G KA+F S +W FA+DN LEVGDVCVFEL+N N N +V+I Sbjct: 486 HEKARAIQKASNFKSKNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEF-SHTWRAFARDNNLEVGDVCVFELINRNENSFKVSI 601 HSP 3 Score: 96.2857 bits (238), Expect = 4.823e-17 Identity = 59/168 (35.12%), Postives = 86/168 (51.19%), Query Frame = 1 Query: 1633 SGISSDAQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKF-FRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRS 2133 +SS S ++ ++ LT EKA A+Q AS F+S +NP F +VM+P Y+ +C + IP F ++L K L S G+TW KF + + A W F DN+L VGD+CVFELI E KV I+ A+ + PQA S+V +++ Sbjct: 462 DNVSSSTPGSTESKHHCSIRSLTPHEKARAIQKASNFKS-KNPFFKVVMQPRYLTIRCSLSIPYKFVNQYLDEEKEEAILQVSDGRTWVVKFAVKVVTGGQHKAEFSHTWRAFARDNNLEVGDVCVFELINRNENSFKVSIFSEAPGANSSLSPQAHDVKASQVASKN 628 HSP 4 Score: 79.7221 bits (195), Expect = 6.065e-12 Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 1 Query: 2488 RACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYR-RKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +A A +F + NP F V + PSYI + IP F ++L + G++ L DGR W +Y NK KA W QF DN LE GDVCVFEL+++ +L+V I+R Sbjct: 328 KALQRAFSFESENPFFLVTMQPSYINPGRKMCIPKNFTMKFLTRDLGDLTLCTSDGRTWSAQYLCYMTRNKYTKATI-HIGWRQFMLDNNLEAGDVCVFELISQTEIMLKVIIYR 441 HSP 5 Score: 69.3218 bits (168), Expect = 1.186e-8 Identity = 35/68 (51.47%), Postives = 43/68 (63.24%), Query Frame = 3 Query: 993 EDDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIRQPEILM 1196 E++ SMFT KTPHFFK+IL I +L IP FVRKYGN LS+ V L VP+G EL + I+ Sbjct: 7 ENNNSMFTPKTPHFFKIILDANIRDKKLEIPGKFVRKYGNGLSNSVLLTVPSGDTWHVELTKSDGIVW 74
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A059BBI7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00890 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.123e-23 Identity = 106/396 (26.77%), Postives = 175/396 (44.19%), Query Frame = 1 Query: 1684 CVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYI--------ESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKL---------EKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAI 2820 C+ +TA EKA S FES ++P F +VMRPSYV + ++ IPS F RK + K TL + + W K + + A L GWC FV + L + D+CVFELI +I+ V I+ L + + K R L SD + RP R+ + + + + S LD+ + K+ S + + + + G++L +++ + + E++ S + + P P PV ++ AS F + P F VVI P++I + L+IP +F+K Y++ MV V GR W V+ K + F + W F ++ +L +GD CVFEL++ + + ++I Sbjct: 323 CLSPVTAHEKA------SGFES-DHPFFKVVMRPSYV--RKQLSIPSGFFRKHVQKNKQIATL-RYSDRLWQVKLRSF--EHRGTAFLSNGWCSFVRETGLRLRDVCVFELIDRDDIVFSVYIFK----------SDGLSPVSAFEKARRLESDHP-FFKVVMRPSYVRKRLSIPSEFFRKHVKKNKQVATLSYLDRSWQVKLKSYDHRGMAFLTSGWPSFTRETGLRLGDVCVFELIDRDDIVFRVSIFSSDGRIEIEQSQFRESSSEPAFHGSPCPSPVATYEK----ASKFESEYPFFHVVILPNHI--YTKLNIPWKFMKTYIRGDRRMVTLVNSGRSWEVKLH---GYKRFQIAFLAAGWSAFVREARLCIGDACVFELIDRDNIVFRISI 686 HSP 2 Score: 68.1662 bits (165), Expect = 2.536e-8 Identity = 40/116 (34.48%), Postives = 61/116 (52.59%), Query Frame = 1 Query: 2503 ASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHRKHLLIEIA 2850 AS F++ +P F VV+ PSYI L +P EF +++++K+ ++V R W V+ R S + F S W F ++ L V DVCVFEL++ N + V+ IEI Sbjct: 195 ASKFKSDHPFFRVVMRPSYI--QKYLCVPCEFFRKHVQKNKQLVTLRYSDRSWQVKLR---SYGHRRMAFLSTGWSSFVRETGLHVSDVCVFELIDRNDIMFRVSNFNNDGWIEIG 305 HSP 3 Score: 68.1662 bits (165), Expect = 2.580e-8 Identity = 40/109 (36.70%), Postives = 63/109 (57.80%), Query Frame = 1 Query: 1720 AVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKV 2046 A+++AS F+S ++P F +VMRPSY+ + + +P F RK + K +TL + ++W K Y + A L GW FV + L+V D+CVFELI +I+ +V Sbjct: 191 ALELASKFKS-DHPFFRVVMRPSYI--QKYLCVPCEFFRKHVQKNKQLVTL-RYSDRSWQVKLRSYGHRRM--AFLSTGWSSFVRETGLHVSDVCVFELIDRNDIMFRV 293 HSP 4 Score: 64.3142 bits (155), Expect = 3.479e-7 Identity = 39/108 (36.11%), Postives = 58/108 (53.70%), Query Frame = 1 Query: 1732 ASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 AS FES E P F +V+ P+++ K IP F + ++ + +TL NS G++W K Y + A L GW FV + L +GD CVFELI I+ ++ I+ Sbjct: 586 ASKFES-EYPFFHVVILPNHIYTKLN--IPWKFMKTYIRGDRRMVTLVNS-GRSWEVKLHGY--KRFQIAFLAAGWSAFVREARLCIGDACVFELIDRDNIVFRISIF 687
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A061DHL4_THECC (AP2/B3-like transcriptional factor family protein, putative OS=Theobroma cacao GN=TCM_000517 PE=4 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 2.259e-23 Identity = 74/172 (43.02%), Postives = 99/172 (57.56%), Query Frame = 1 Query: 1570 KKMR-INSPNQHGQNSKLEVLSSGISSD------AQRSVTTEALSCVQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYVL--GKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKP-NAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 K MR NS N+ N K E L+ + A +S T+ +++L A +KA A+Q A AF+S ENP F++VM+PSYV GK R+ IP+NF K L C + LCNS GKTW +R ++ A L GW FV+DN++ +GD+CVFELI EI KV IY Sbjct: 201 KMMRSANSANKTESNLKCESLAPHFRHNGSPDRKADKSTTSHR---IKKLNADKKAKALQRARAFKS-ENPFFLLVMQPSYVGLNGKWRLAIPNNFVWKHLMKEDCEVILCNSNGKTWTVSLYRRGNGRELLYAGLQTGWKTFVKDNNIQIGDVCVFELINCMEISFKVTIY 368 HSP 2 Score: 79.337 bits (194), Expect = 4.675e-12 Identity = 90/350 (25.71%), Postives = 144/350 (41.14%), Query Frame = 1 Query: 1750 TENPVFMIVMRPSYVLGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSS--LHIPVEFVKRYL-KKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMN 2790 +E+P F ++ P L ++ IP+ F +++ L + W + P L GW EF L G VF E + ++AS+ P GS R Q P E + DS ++ L+D +KT +K P +P K+MR+ S + +K E SL + + G + + ++ R K K +A A AF++ NP F +V+ PSY+G + L IP FV ++L K+ E++L +G+ W V R+ + + W F KDN +++GDVCVFEL+N Sbjct: 46 SESPHFFTIILPG-TLRDGKLGIPTKFVKRYGNGMSSPALLRVPNDEVWKVE----PTKCDGKVWLKNGWQEFSNHYSLEYGHFLVFRY----EGFCNFHVVIFDRSASEIEYP--YGSNNHR--------------QHKELPEQKIEESEDADS-LQILEDISPSRKTGEKSHLPCSRPHKMMRSANSANKTESNLKCE----SLAPHF--RHNGSPDRKADKSTTSHRIKKLNADK------KAKALQRARAFKSENPFFLLVMQPSYVGLNGKWRLAIPNNFVWKHLMKEDCEVILCNSNGKTWTVSLYRRGNGRELLYAGLQTGWKTFVKDNNIQIGDVCVFELIN 357 HSP 3 Score: 63.1586 bits (152), Expect = 6.804e-7 Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 3 Query: 996 DDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFE 1169 +D MF S++PHFF +IL T+ G+LGIP FV++YGN +SS L VPN + E Sbjct: 39 NDHPMFISESPHFFTIILPGTLRDGKLGIPTKFVKRYGNGMSSPALLRVPNDEVWKVE 96
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: M5WBU9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022948mg PE=4 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 5.237e-23 Identity = 112/377 (29.71%), Postives = 174/377 (46.15%), Query Frame = 1 Query: 1696 LTAIEKAHAVQIASAFESTENPVFMIVMRPSYVLGKCRMFIPSNFT--RKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIK-LEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGSSSSLHIPVEFVKRYLKKSGE-MVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEV 2814 LT KA A+Q A A++S + P F++ M SY+ G+ M++ S+F+ L+ N+ L + G+ W +F KP A GW EFV N+LN+ D+CVF LI ++ +V+I+ V+ A+ P G +SLD+ P KT +K++ + QP K RT +++AK I+ + K+ F EV + P GK RA + A+A+++ PSF+ IHP+ I L +P +FVK +L ++ + ++LRV D R W V K G+A F + W +F ++N LEV DVCVFEL+N L + Sbjct: 215 LTTSGKALALQRAKAYKS-DKPSFIVPMHHSYI-GRHPMWLTSDFSIFMGHLSKNSANVILWDLGGRAWVVEFI-----AKPRAKFQSGWHEFVCGNNLNINDVCVFVLIDDTRLVFEVVIFRAVEAANCTLLPDVDGEETDEDDDSV-----------------------------DSLDELPPCSKT-RKISPIAPQPHKKNRT--CSTSKAKNIEHVCGSSKTRKFVIRRPEVPRMM------------------HPVAASGKDRALLRANAYKSKYPSFTAAIHPTNI-CGCYLALPAKFVKEHLNQAHDKVILRVSDERTWHVNL-----CKYGRA-FRLQRWMRFVRENHLEVDDVCVFELINNIKPLFNI 527 HSP 2 Score: 68.1662 bits (165), Expect = 1.971e-8 Identity = 63/210 (30.00%), Postives = 94/210 (44.76%), Query Frame = 1 Query: 2218 IESLDD-SPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSL-NFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGASAFRTSNPSFSVVIHPSYIGS-----SSSLHIPVEFVKRYLKKSGEMVLRVVDGRIWIVEYRRKASNKGGKAKFGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 +E LD P +K+K+K + P +P K RT+ S + + ++ S F T+ V G + P GK A A A+++ PSF V +H SYIG +S I F+ K S ++L + GR W+VE+ K +AKF S W +F N L + DVCVF L+++ + EV I R Sbjct: 148 LEILDKFPPCPRKSKEKSSLPCPRPHKKKRTSSSGNVDYPAKRHDRGTSSTPRFLKQTQVVRGRMH------------------PLTTSGKALALQRAKAYKSDKPSFIVPMHHSYIGRHPMWLTSDFSI---FMGHLSKNSANVILWDLGGRAWVVEFIAKP-----RAKFQS-GWHEFVCGNNLNINDVCVFVLIDDTRLVFEVVIFR 330
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Match: A0A0D2NV50_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G020000 PE=4 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.222e-22 Identity = 58/127 (45.67%), Postives = 76/127 (59.84%), Query Frame = 1 Query: 1687 VQRLTAIEKAHAVQIASAFESTENPVFMIVMRPSYV----LGKCRMFIPSNFTRKFLTMYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIY 2055 +Q+L EK A++ AS +ENP F++VM+PSYV R+ IP+NF RK L C++TLCNS+GKTW F KK ++L GW FV DN++ VGD C FELI EI V+IY Sbjct: 213 IQQLKPHEKDDALERASKTFKSENPFFLVVMQPSYVGLSHSKGYRLAIPANFVRKHLMKELCSITLCNSSGKTWIVTFKNNQIGKKQTSYLLTGWGTFVHDNNVRVGDACAFELINSIEISFNVVIY 339 HSP 2 Score: 84.7297 bits (208), Expect = 6.938e-14 Identity = 92/334 (27.54%), Postives = 145/334 (43.41%), Query Frame = 1 Query: 1849 MYKCNLTLCNSTGKTWHAKFFRYPENKKPNAHLYGGWCEFVEDNHLNVGDICVFELIKHPEILMKVLIYPVVKNASKACGPQALGSIVSRVKTRSLVSDAKRSCQQSARPPSSREFIDLTDSYIESLDDSPLDQKTKKKMTSPSFQPCKLMRTNPSESNQAKGIKLEKEKKSLNFQYLTKEVGGELKYSVXXXXXXXXXXXXCPKPDPVYGKQRACVGAS-AFRTSNPSFSVVIHPSYIGSSSS----LHIPVEFVKRYLKKS-GEMVLRVVDGRIWIVEYRRKASNKGGKAK--FGSRSWGQFAKDNQLEVGDVCVFELMNENGNLLEVAIHR 2826 ++K LT CN GK W GW EF L+ G + VF + V+I+ + A++ P + + R RS + +K D +L+D +K ++K P QPCK+M + +N A ++E + KS ++L +++ E + D+ R + KP + K A AS F++ NP F VV+ PSY+G S S L IP FV+++L K + L G+ WIV ++ +N+ GK + + WG F DN + VGD C FEL+N V I++ Sbjct: 63 VWKVELTKCN--GKIW----------------FENGWLEFSNHYSLDFGHLLVFRYDGNSN--FHVVIFD--RTATEILYPYTRYNHIHR---RSNIDKSK------------------DDDSTPNLEDISTSRKLREKSQMPCPQPCKMMHS----TNSAIKTEIECDGKS---EFLAQQIRYEGCPARNGDKSTRHRVIQQLKP---HEKDDALERASKTFKSENPFFLVVMQPSYVGLSHSKGYRLAIPANFVRKHLMKELCSITLCNSSGKTWIVTFK---NNQIGKKQTSYLLTGWGTFVHDNNVRVGDACAFELINSIEISFNVVIYQ 340 HSP 3 Score: 67.781 bits (164), Expect = 1.791e-8 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 3 Query: 996 DDCSMFTSKTPHFFKVILQETITHGRLGIPRNFVRKYGNQLSSHVKLEVPNGAICVFELIR 1178 +D F S +PHFFK+ILQ+TI +G+LG+PR FV+ GN +SS L VP+G + EL + Sbjct: 10 NDHLKFISNSPHFFKIILQDTIQNGKLGVPRKFVKNQGNSMSSPAMLSVPSGEVWKVELTK 70 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 6
BLAST of g.barbadense_cottongen_reftransV1_0095074 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0095074 ID=g.barbadense_cottongen_reftransV1_0095074; Name=g.barbadense_cottongen_reftransV1_0095074; organism=Gossypium barbadense; type=contig; length=3001bpback to top |