GhM_D13G1663.1

Transcript Overview
NameGhM_D13G1663.1
Unique NameGhM_D13G1663.1_HEAU-NDM8_v1
TypemRNA
OrganismGossypium hirsutum (Upland Cotton)
Sequence length1035
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D13chromosomeD13:47846444..47850176 +Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1n/a
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
adndmL0087Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
awndmL0110Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
adndmL0785Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
adndmL0932Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
dfindmL0617Gossypium aridum (D4) genome ISU_v1Gossypium aridum
awndmL0750Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
dfindmL0992Gossypium aridum (D4) genome ISU_v1Gossypium aridum
dqindmL0876Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
dqindmL1168Gossypium lobatum (D7) genome ISU_v1Gossypium lobatum
adndmL2876Gossypium mustelinum (AD4) genome JGI_v1.1Gossypium mustelinum
dtondmL0183Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
ganndmL0095Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
fnndmL0096Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
ganndmL0752Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
ganndmL0754Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
fnndmL0760Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
dtondmL1340Gossypium armourianum (D2-1) genome ISU_v1Gossypium armourianum
fnndmL1775Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
ghndmL0079Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gdndmL0082Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
ghtndmL0083Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghndmL0724Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gdndmL0748Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
ghndmL0879Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghtndmL0717Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
gdndmL0895Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
ghtndmL0861Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghndmL1954Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghndmL2770Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
gdndmL2849Gossypium darwinii (AD5) genome HGS_v1.1Gossypium darwinii
ghtndmL2692Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
ghndmL3639Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1Gossypium hirsutum
ghzndmL0087Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gkndmL0085Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gkndmL0381Gossypioides kirkii genome ISU_v3Gossypioides kirkii
ghzndmL0745Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
ghzndmL0883Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
gosndmL0098Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
gkndmL1306Gossypioides kirkii genome ISU_v3Gossypioides kirkii
gosndmL0746Gossypium stocksii (E1) genome NSF_v1Gossypium stocksii
ghzndmL2742Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1Gossypium hirsutum
grhndmL0090Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grhndmL0742Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
grondmL0123Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
gtbndmL0104Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
gtindmL0623Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gtindmL1087Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi
gtbndmL0760Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
grondmL0904Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
hbndmL1716Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbndmL2139Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
gtbndmL1789Gossypium turneri (D10) genome NSF_v1_a2Gossypium turneri
hbndmL3180Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
grondmL1946Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
hbndmL4197Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hbndmL4563Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
hgsndmL0087Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hjndmL0088Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hnndmL0081Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hjndmL0734Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgsndmL0763Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hnndmL0729Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hjndmL0880Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hnndmL0886Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hgsndmL0904Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hwndmL0092Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ndmndmL0113Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgsndmL2001Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hjndmL1932Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hzndmL0082Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hwndmL0777Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
ndmndmL0792Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
ndmndmL0946Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
hgsndmL2840Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
hnndmL2838Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
hjndmL2734Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hzndmL0701Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hzndmL0848Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
hwndmL1820Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
hjndmL3617Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
hgsndmL3714Gossypium barbadense (AD2) '3-79' genome HGS_v1.1Gossypium barbadense
ndmtoR2232Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ndmtoR2248Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ndmtoR2265Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ndmtoR2287Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
ndmtoR2314Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
hzndmL2656Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
ndmtwR2665Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ndmtwR2685Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ndmtwR2705Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ndmtwR2720Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ndmtwR2765Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
ndmuhR2194Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ndmuhR2211Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ndmuhR2226Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ndmuhR2248Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
ndmuhR2274Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
jmbndmL0090Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbndmL0728Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbndmL0882Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
jmbndmL2741Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
ndmpscR2613Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ndmpscR2632Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ndmpscR2651Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ndmpscR2712Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
ndmpscR2724Gossypium hirsutum (AD1) 'PSC355' genome USDA_v1Gossypium hirsutum
adyndmL0092Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyndmL0718Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyndmL0859Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
adyndmL2685Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
hpfndmL0087Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpfndmL0724Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpfndmL0862Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
hpfndmL2688Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum

Orthologs
Gene/TranscriptAssemblySpecies
Gar13G17810Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1Gossypium arboreum
mikado.F13G4726.1Gossypium longicalyx (F1) genome NSF_v1Gossypium longicalyx
Grai_13G017940.1Gossypium raimondii (D5) 'Grai D502' genome HAU_v1Gossypium raimondii
Ghe13G18000Gossypium herbaceum (A1) 'Mutema' genome WHU_v1Gossypium herbaceum
Grot_13G011320.1Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1Gossypium rotundifolium
Goano.013G130700-1Gossypium anomalum (B1) genome NSF_v1Gossypium anomalum
Kirkii_Juiced.00g376510.m01Gossypioides kirkii genome ISU_v3Gossypioides kirkii
rna-gnl|WGS_VKGE|Gotom.A13G159500.2Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
rna-gnl|WGS:JABEZX|Golob_00031136-RAGossypium lobatum (D7) genome ISU_v1Gossypium lobatum
rna-gnl|WGS_VKGE|Gotom.D13G164200.1Gossypium tomentosum (AD3) genome HGS_v1.1Gossypium tomentosum
EVM0018822.3Gossypium thurberi (D1-5) genome CRI_v1Gossypium thurberi

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Ghi_D13G08006Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Gh_A13G150800.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Gohir.D13G135300.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
GhM_A13G1787.1Gossypium hirsutum (AD1) 'NDM8' genome HEAU_v1Gossypium hirsutum
GH_D13G01582_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
GH_D13G1496Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
Ghi_A13G09226Gossypium hirsutum (AD1) 'TM-1' genome WHU_v1Gossypium hirsutum
Gohir.D13G135300.1Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
GH_A13G1550Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1Gossypium hirsutum
GhirPD1301T136600.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
Gh_A13G1110Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
GhirPA1301T138400.1Gossypium hirsutum (AD1) 'TX-1000' genome CRI_v1Gossypium hirsutum
D13G15780.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
CotAD_52074Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
A13G17330.mRNA1Gossypium hirsutum (AD1) 'YM11' genome XAAS_v1Gossypium hirsutum
GH_A13G01539_HPF.1Gossypium hirsutum (AD1) 'HPF17' genome ZJU_v1Gossypium hirsutum
Gh_D13G151800.1Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1Gossypium hirsutum
Gohir.A13G131900.6Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1Gossypium hirsutum
Gohir.A13G131900.1Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1Gossypium hirsutum
CotAD_69994Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1Gossypium hirsutum
Gh_D13G1378Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1Gossypium hirsutum
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
GhM_D13G1663GhM_D13G1663_HEAU-NDM8_v1Gossypium hirsutumgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
GhM_D13G1663.1.utr5p1GhM_D13G1663.1.utr5p1_HEAU-NDM8_v1Gossypium hirsutumfive_prime_UTR
GhM_D13G1663.1.utr5p2GhM_D13G1663.1.utr5p2_HEAU-NDM8_v1Gossypium hirsutumfive_prime_UTR
GhM_D13G1663.1.utr5p3GhM_D13G1663.1.utr5p3_HEAU-NDM8_v1Gossypium hirsutumfive_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
GhM_D13G1663.1.exon1GhM_D13G1663.1.exon1_HEAU-NDM8_v1Gossypium hirsutumexon
GhM_D13G1663.1.exon2GhM_D13G1663.1.exon2_HEAU-NDM8_v1Gossypium hirsutumexon
GhM_D13G1663.1.exon3GhM_D13G1663.1.exon3_HEAU-NDM8_v1Gossypium hirsutumexon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
cds.GhM_D13G1663.1cds.GhM_D13G1663.1_HEAU-NDM8_v1Gossypium hirsutumCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
GhM_D13G1663.1.utr3p1GhM_D13G1663.1.utr3p1_HEAU-NDM8_v1Gossypium hirsutumthree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
GhM_D13G1663.1GhM_D13G1663.1_HEAU-NDM8_v1-proteinGossypium hirsutumpolypeptide
GhM_D13G1663.1_HEAU-NDM8_v1GhM_D13G1663.1_HEAU-NDM8_v1Gossypium hirsutumpolypeptide


Homology
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: ref|XP_016705554.1| (transcription termination factor MTEF1, chloroplastic isoform X1 [Gossypium hirsutum] >ref|XP_016705555.1| transcription termination factor MTEF1, chloroplastic isoform X1 [Gossypium hirsutum] >ref|XP_016705557.1| transcription termination factor MTEF1, chloroplastic isoform X1 [Gossypium hirsutum] >gb|TYI47219.1| hypothetical protein E1A91_D13G157400v1 [Gossypium mustelinum] >gb|KAG4111985.1| hypothetical protein ERO13_D13G135300v2 [Gossypium hirsutum] >gb|KAG4111986.1| hypothetical protein ERO13_D13G135300v2 [Gossypium hirsutum] >gb|KAG4111987.1| hypothetical protein ERO13_D13G135300v2 [Gossypium hirsutum] >gb|KAG4111988.1| hypothetical protein ERO13_D13G135300v2 [Gossypium hirsutum])

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: ref|XP_012463927.1| (PREDICTED: uncharacterized protein LOC105783181 [Gossypium raimondii] >ref|XP_012463928.1| PREDICTED: uncharacterized protein LOC105783181 [Gossypium raimondii] >ref|XP_012463929.1| PREDICTED: uncharacterized protein LOC105783181 [Gossypium raimondii] >gb|KJB81607.1| hypothetical protein B456_013G151800 [Gossypium raimondii] >gb|KJB81608.1| hypothetical protein B456_013G151800 [Gossypium raimondii] >gb|KJB81609.1| hypothetical protein B456_013G151800 [Gossypium raimondii])

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 343/344 (99.71%), Postives = 344/344 (100.00%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLE+RIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLESRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: gb|KAB1995339.1| (hypothetical protein ES319_D13G154400v1 [Gossypium barbadense] >gb|KAB1995340.1| hypothetical protein ES319_D13G154400v1 [Gossypium barbadense])

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 342/344 (99.42%), Postives = 343/344 (99.71%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAH+NGSDLKKVINRRPRLLACNVETQLR TLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHINGSDLKKVINRRPRLLACNVETQLRSTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: gb|TYH35016.1| (hypothetical protein ES332_D13G164200v1 [Gossypium tomentosum] >gb|TYH35017.1| hypothetical protein ES332_D13G164200v1 [Gossypium tomentosum])

HSP 1 Score: 686.797 bits (1771), Expect = 0.000e+0
Identity = 342/344 (99.42%), Postives = 343/344 (99.71%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDF LLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALL+TSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFSLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLRTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: gb|TYG37736.1| (hypothetical protein ES288_D13G165000v1 [Gossypium darwinii] >gb|TYG37737.1| hypothetical protein ES288_D13G165000v1 [Gossypium darwinii])

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 341/344 (99.13%), Postives = 342/344 (99.42%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAH+NGSDLKKVINR PRLLACNVETQLR TLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHINGSDLKKVINRWPRLLACNVETQLRSTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: ref|XP_017616678.1| (PREDICTED: transcription termination factor MTEF1, chloroplastic [Gossypium arboreum] >ref|XP_017616679.1| PREDICTED: transcription termination factor MTEF1, chloroplastic [Gossypium arboreum] >ref|XP_017616680.1| PREDICTED: transcription termination factor MTEF1, chloroplastic [Gossypium arboreum])

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 335/344 (97.38%), Postives = 337/344 (97.97%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLP LPKNNPFPPLL PHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKP+PK PQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS+SFTTLELRRILSMCPHILTVK TSLLPIFTFLLRE HVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWC K CDI
Sbjct:    1 MSLISLSHAMQDTLPFLPKNNPFPPLLPPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPHPKIPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKSTSLLPIFTFLLREVHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCAKACDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: ref|XP_016697381.1| (transcription termination factor MTEF1, chloroplastic isoform X1 [Gossypium hirsutum] >ref|XP_016697382.1| transcription termination factor MTEF1, chloroplastic isoform X1 [Gossypium hirsutum] >ref|XP_016697383.1| transcription termination factor MTEF1, chloroplastic isoform X1 [Gossypium hirsutum])

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 335/344 (97.38%), Postives = 337/344 (97.97%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLP LPKNNPFPPLL PHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKP+PK PQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS+SFTTLELRRILSMCPHILTVK TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF SRLEVCCNSTLPLKGSPLWC K CDI
Sbjct:    1 MSLISLSHAMQDTLPFLPKNNPFPPLLPPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPHPKIPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKSTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFCSRLEVCCNSTLPLKGSPLWCAKACDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: gb|PPS16992.1| (hypothetical protein GOBAR_AA03589 [Gossypium barbadense])

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 306/313 (97.76%), Postives = 308/313 (98.40%), Query Frame = 0 
Query:   10 MQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 322
            MQDTLP LPKNNPFPPLL PHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKP+PK PQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS+SFTTLELRRILSMCPHILTVK TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLR TLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE
Sbjct:    1 MQDTLPFLPKNNPFPPLLPPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPHPKIPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKSTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRSTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 313
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: ref|XP_039016026.1| (transcription termination factor MTEF1, chloroplastic-like [Hibiscus syriacus] >gb|KAE8689942.1| 2-cysteine peroxiredoxin B [Hibiscus syriacus])

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 275/335 (82.09%), Postives = 300/335 (89.55%), Query Frame = 0 
Query:   10 MQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            M+DTLP LP+ NP        HH FP LSR +NLHFPT SS+TITP SLPPK +P+ P I S  PPPP+PPP S SDFQEKMLYL+SIGLD FSL+Q HPPII ASLHDLKSTV+FL SL+FTTLEL RILSMCPHILT+KP+SLLPIFTFLLREA VNGSDLK+VINRRPRLLACNVETQLRPTLYFLQSIGISE+++HTSLL+CSVENK IPR+DYFQKIGFSHR++ISMF RFP LFNYSIKENYE KLNYF+VEMGRDLREI+EFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSE+EFRSRLEVCCNSTLPLKGSPL C+K CDI
Sbjct:    1 MRDTLPFLPQTNPLLSSHHHKHHHFPSLSRHRNLHFPTISSKTITPASLPPKTHPQLPSI-SHPPPPPLPPPTSRSDFQEKMLYLDSIGLDLFSLVQRHPPIISASLHDLKSTVEFLFSLNFTTLELTRILSMCPHILTIKPSSLLPIFTFLLREARVNGSDLKRVINRRPRLLACNVETQLRPTLYFLQSIGISEIRRHTSLLSCSVENKFIPRVDYFQKIGFSHRKSISMFRRFPQLFNYSIKENYEHKLNYFVVEMGRDLREIKEFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEIEFRSRLEVCCNSTLPLKGSPLSCSKHCDI 334
[Close]
BLAST of GhM_D13G1663.1 vs. NCBI nr
Match: ref|XP_022766064.1| (transcription termination factor MTEF1, chloroplastic-like [Durio zibethinus])

HSP 1 Score: 502.671 bits (1293), Expect = 2.055e-176
Identity = 267/337 (79.23%), Postives = 289/337 (85.76%), Query Frame = 0 
Query:   10 MQDTLPVLPKNNPFPPLLSPHH--HDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MQDTLP LPKN PFPPL   HH  +DF  LSRP+ LHFPTFSS+TIT T+  P            S  PP+PP NSHSDFQEKMLYL+SIGLDFFSL+QHHPPII ASLHDLKSTVDFLAS +F+TLE RRILSMCP ILT KPTSLL +FTFLLREA VNGSDLKKVINRRPRLL CNVETQLRPTLYFLQ+IGI EVKKHTSLL+CSVENKLIPR++YFQKIGF +RQTISMF RFP LFNYS+KENYE KLNYF+VEMGRDLREI+EFPQYFSFSLENRIKPRHQ CVEKGVCFPL  LLKT+EVEF +RLEVCC+S+LP KGSPLWCT  CDI
Sbjct:    1 MQDTLPFLPKNKPFPPLFPSHHKHNDFSSLSRPRKLHFPTFSSKTITTTTPLPPKPHP-KIPEVPSISPPLPPLNSHSDFQEKMLYLDSIGLDFFSLLQHHPPIITASLHDLKSTVDFLASRNFSTLEQRRILSMCPQILTTKPTSLLTVFTFLLREARVNGSDLKKVINRRPRLLTCNVETQLRPTLYFLQNIGICEVKKHTSLLSCSVENKLIPRMEYFQKIGFCYRQTISMFRRFPQLFNYSVKENYEPKLNYFVVEMGRDLREIKEFPQYFSFSLENRIKPRHQCCVEKGVCFPLHLLLKTTEVEFHNRLEVCCDSSLPFKGSPLWCTNNCDI 336
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF1_ARATH (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 6.955e-47
Identity = 90/237 (37.97%), Postives = 143/237 (60.34%), Query Frame = 0 
Query:   87 FQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTS-LLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGI----SEVKKHTSLLTCSVENKLIPRIDYFQK-IGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF 317
            F+EK++YL+ + +D    ++ +P +  A +  + S    L+S   +   + RIL M P +LT  P S +LP+  FL  E  ++  D+ K I+R PRLL  +V+ QLRP L FL+++G     +   ++T LL  +VE  LIP+I+Y ++ +GF+  +   M  R P L  YS+  N   K+ +F+ EM  D++E++ FPQYFSFSLE +IKPRH++  E G+  PL  +LK S+ +F
Sbjct:   33 FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 269
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF5_ARATH (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.657e-22
Identity = 69/222 (31.08%), Postives = 114/222 (51.35%), Query Frame = 0 
Query:  100 DFFSLIQHHPPIIFASLHD-LKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGIS-EVKKHT--SLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF 317
            D  +++   P I   SL D LK T+ FL +L     +  +I+S  P ILT     L     FL  +  +    + +++ R P +++ +VE +LRPT+ + +S+ +   V  H        S+E+ L P  ++F + GF   +   M  R+  L+ +S+KEN   K +YF   M     E+ +FPQ+F +SL+ RIKPR+++    GV   L  +L  S +EF
Sbjct:  248 DIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFL-SQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF9_ARATH (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 6.495e-21
Identity = 65/244 (26.64%), Postives = 125/244 (51.23%), Query Frame = 0 
Query:   88 QEKMLYLESIGL---DFFSLIQHHPPII-FASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVK-PTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFL-QSIG------ISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVE-----KGVCFPLPALLKTSE 314
            QE++ YL S+G+   D   ++   P I+ +   ++LK+ + FL  L     ++ +I++  P + +     SL P   +L+ E  +  +D+ KV+   P++L   ++        FL + +G      +  VKKH  LL  S+++  +PRI++ + IG  +   + +      + + S+++N + K  Y + E+  ++  + ++P Y S SL+ RI+PRH+  VE     KG  FPL +L+   E
Sbjct:  220 QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKG-PFPLSSLVPNDE 462
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.058e-19
Identity = 81/289 (28.03%), Postives = 132/289 (45.67%), Query Frame = 0 
Query:   78 MPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPII-FASLHDLKSTVDFLASLSFTTLELRRILSMCPH-----------------------------ILTVKP--------TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQS-IGISE------VKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRL 321
            M    S  DF  KM   ++   DF +++  +P II F S   ++  +++L     +T E+ R+L+  PH                             IL VKP         ++ P   FL +E  +    +  ++ + P LL  ++  ++RP + FL +  G+++      +    +LL CS+  KL P + Y+  +G    Q   M   FP L  Y++ +N   K  Y    M R L+++ EFP++FS+SLE RI PRH I VE  V F L  +L  ++ EF  R+
Sbjct:  313 MEEVKSRVDFFLKMGMNQN---DFGTMVYDYPKIIGFFSFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKRILVVKPILYCIDLEKTIAPKVRFL-QEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFLLTRAGVTQKDIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNV-DNLRPKYRYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRV 596
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF6_ARATH (Transcription termination factor MTERF6, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MTERF6 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.003e-15
Identity = 57/227 (25.11%), Postives = 109/227 (48.02%), Query Frame = 0 
Query:  103 SLIQHHPPIIFASLHD-LKSTVDFLASLSFTTLELRRILSMCPHILTVK-PTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQS-IGISE------VKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSR 320
            S I   PPI+  S+ + L   + F  +L     +L +++   P +++    T L  I +FL          + KV+ + P L+  +V+ +LRPT  FL+S +G+SE      V     LL   V   L P  DY ++ GF   Q  +M   +P +   S+K + + ++ + +  MGR + E+  +P++F   L+ +++ R ++  +  +   L  +L  +  +F  +
Sbjct:   97 SAITKFPPILSHSVEEKLCPLLAFFQALGVPETQLGKMILFNPRLISYSIDTKLTVIVSFLASLGLDQDGMIGKVLVKNPFLMGYSVDKRLRPTTEFLKSSVGLSEDGIKSVVMNFPQLLCRDVNKILKPNYDYLKECGFGDSQIATMVTGYPQILIKSVKNSLQPRIRFLVQVMGRGMDEVASYPEFFHHGLKKKVESRFKLVKKNNIDCSLREMLDCNTKKFHEK 323
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF4_MAIZE (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.110e-13
Identity = 53/262 (20.23%), Postives = 113/262 (43.13%), Query Frame = 0 
Query:  104 LIQHHPPIIFASLHDLKST-VDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGI------SEVKKHTSLLTCSVENKLIPR------------------------------------IDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 322
            +++ +P ++   L    ST V +L  +     ++  +++  P +L ++   ++  F   L    +    + ++I ++P +L   ++ +++P +  L  IG+      S V ++  +L   + +KL+ +                                    +++    GF   Q   M    P L   +I +   +   YF  EM RDL E+ EFP +F++ +E+ ++PRH++   KG+   L  LL  S+ +F  R++
Sbjct:  191 VLERYPELLGFKLEGTMSTSVAYLVGIGVGRRQVGSVITRFPEVLGMRVGKIIKPFVEHLEGIGLQRLAIARIIEKKPYVLGFGLQEKVKPNIEALVDIGVRKEALASIVMQYPDVLGLELRDKLVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLKHVNFLTACGFMLSQVSKMVVACPQLLALNI-DIMRMNFEYFKNEMERDLEELVEFPAFFTYGIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMK 451
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF4_ORYSJ (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 4.446e-13
Identity = 62/235 (26.38%), Postives = 102/235 (43.40%), Query Frame = 0 
Query:   93 YLESIGLDFFSL---IQHHPPIIFASLHD-LKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREA-HVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 322
            +LE IGL   ++   I+  P ++   L D +K  ++ L         L  I++  P IL ++    L     L   +  V+  D  +VI R P+ +                S+G + V KH + LT                 GF   Q   M    P L   ++ +  ++   YF  EM RDL E+ EFP +F++ LE+ ++PRH++  +KG    L  LL  S+ +F  R++
Sbjct:  258 HLEGIGLQRLAIARIIEKKPYVLGFGLEDKVKPNIEALLEFGVRKEALAFIVAQYPDILGIELRDKLATQQSLFESSILVSSEDFGRVIERMPQAI----------------SLGRTAVLKHVNFLTSC---------------GFLLSQVSKMVVACPQLLALNM-DIMKMSFEYFQNEMERDLEELVEFPAFFTYGLESTVRPRHEMVAKKGFTCSLAWLLNCSDAKFDERMK 460
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.624e-11
Identity = 60/241 (24.90%), Postives = 119/241 (49.38%), Query Frame = 0 
Query:   93 YLESIGL---DFFSLIQHHPPIIFASLHDL-KSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFL--------QSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRL 321
            YL  IG+   +   ++  +P I+   +  + K  V++L  L    L   R++   PHIL  +    +     +L++ +V  + L  +I + P ++  +++ +L      L        + +G S +++    ++ S E+ ++  ID+  K GFS  QT  M    P +   ++    +L   YF  EM R L+++ +FP +F++ LE+ +KPRH+  ++KG+   L  +L  S+ +F  R+
Sbjct:  257 YLVGIGVARREIGGILTRYPEILGMRVARIIKPLVEYLEVLGIPRLAAARLIEKRPHILGFELDDTVKPNVQILQDFNVRETSLPSIIAQYPEIIGIDLKPKLDTQRKLLCSAIHLNPEDLG-SLIERMPQFVSLS-ESPMLKHIDFLTKCGFSIDQTREMVIGCPQVLALNLG-IMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLAWMLNCSDEKFEQRM 494
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Match: MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 2.250e-10
Identity = 59/233 (25.32%), Postives = 111/233 (47.64%), Query Frame = 0 
Query:  103 SLIQHHPPIIFASLHDLKSTVDFLASLS-FTTLELRRILSMCPHIL-TVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSV----ENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVE-KGVCFPLPALLKTSEVEF---RSRLEVCC 325
            ++++  P I+  S+  +   V+FL S +  T+ ++ +I+ + P+++ T K   L P   FL +E   +   + K +++ P +LA + E  L   L FL  IG     K  +    +V     + +   I  +   G S    ++M  + P +  Y+   + E KL Y +  MGR++ E+  FP +  + L++RIK R++  ++ +G    L  LL  S   F      +E+ C
Sbjct:  270 TVLRRLPAILSYSVEHMNGQVEFLKSFAGLTSEQVFKIVHVFPNVISTSKERKLRPRIEFL-KECGFDSPGMFKFLSKAPLILALS-ENNLSHKLGFLVKIGYKHRTKELAFAMGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYT-SLEEKLEYLIEYMGREVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSKAADNIEMIC 499
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT2G36000.1 (| Mitochondrial transcription termination factor family protein | Chr2:15117181-15118182 FORWARD LENGTH=333 | 201606)

HSP 1 Score: 313.923 bits (803), Expect = 6.862e-106
Identity = 171/316 (54.11%), Postives = 220/316 (69.62%), Query Frame = 0 
Query:   31 HHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSD--FQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS--LSFTTLELRRILSMCPHILTVKPTS-LLPIFTFLLREAHVNGS-DLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTK 340
            HH+FP LSR +  +FP  S +  T +S       K P IPS S            +    EK++YL+S+G+DF +LI  HPP++  +L  ++S VD++ +  ++FT  + RR++SMCP +LT   TS  +P+ TFLLRE  V+   DL++ + RRPRLLAC+V+ QLRPTLYFLQ IGI +  KHT LL+CSV+NKL+PRIDYF+K+GFS R   +MF RFP LFNYSI ENYE KL Y MVEMGRD+RE+ EFPQYFSFSLENRIKPRH+ C  KGV FPLP +LKT+E  FR  LEVCC+S+ PLK S L   +
Sbjct:   17 HHNFPSLSRLRFNNFPALSFKPNTSSSS--SSFFKSPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTLEVCCDSSPPLKTSRLVTVQ 330
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT2G36000.2 (| Mitochondrial transcription termination factor family protein | Chr2:15117181-15118333 FORWARD LENGTH=318 | 201606)

HSP 1 Score: 298.516 bits (763), Expect = 4.915e-100
Identity = 165/304 (54.28%), Postives = 210/304 (69.08%), Query Frame = 0 
Query:   31 HHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSD--FQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS--LSFTTLELRRILSMCPHILTVKPTS-LLPIFTFLLREAHVNGS-DLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEV-CCNS 327
            HH+FP LSR +  +FP  S +    TS       K P IPS S            +    EK++YL+S+G+DF +LI  HPP++  +L  ++S VD++ +  ++FT  + RR++SMCP +LT   TS  +P+ TFLLRE  V+   DL++ + RRPRLLAC+V+ QLRPTLYFLQ IGI +  KHT LL+CSV+NKL+PRIDYF+K+GFS R   +MF RFP LFNYSI ENYE KL Y MVEMGRD+RE+ EFPQYFSFSLENRIKPRH+ C  KGV FPLP +LKT+E  FR  LEV  CN 
Sbjct:   17 HHNFPSLSRLRFNNFPALSFKP--NTSSSSSSFFKSPDIPSLSSTTTTTTTTETLESSIHEKLIYLDSLGIDFLTLINRHPPLLSTALSAVESVVDYMTTPPINFTLQDFRRLVSMCPELLTSPLTSHTIPVITFLLREVGVDSIFDLRQALRRRPRLLACSVDHQLRPTLYFLQRIGILDPHKHTYLLSCSVDNKLVPRIDYFEKLGFSRRSATAMFKRFPQLFNYSIAENYEPKLKYLMVEMGRDVREVLEFPQYFSFSLENRIKPRHEACAAKGVRFPLPVMLKTNEAGFRDTLEVHFCNE 318
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT2G34620.1 (| Mitochondrial transcription termination factor family protein | Chr2:14577196-14578203 FORWARD LENGTH=303 | 201606)

HSP 1 Score: 180.259 bits (456), Expect = 4.948e-54
Identity = 100/240 (41.67%), Postives = 149/240 (62.08%), Query Frame = 0 
Query:   87 FQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKP-TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVK----KHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRL 321
             +EK+L LE +G+D    +  +P +  A L  ++S + FL S      +L RIL MCP ILT    T L P+F FL  + HV  +  ++VI + PRLL  +VE QL+P L++LQ +G+ +++    +   LL  SVE+ LIP++ + + IGFS  + I M  R P LF +SI+ N++ KL+YFM E+   L  ++EFPQYF+FSLE RIKPRH   +E+G+  PL  +LK+++ EF   L
Sbjct:   55 MKEKILCLELMGIDSGKALSLNPCLCSAPLDSIQSVLHFLQSKGIYPNDLPRILGMCPKILTSDVRTELYPVFMFLSNDLHVPENAFRRVIKKCPRLLISSVEDQLKPALFYLQRLGLKDLEALAYQDPILLVSSVEHTLIPKLRFLESIGFSRPEAIGMILRCPALFTFSIENNFKPKLDYFMSEIKGKLENLKEFPQYFAFSLEKRIKPRHLESMERGLELPLSLMLKSTDEEFEQLL 294
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT2G03050.1 (| Mitochondrial transcription termination factor family protein | Chr2:900094-900945 REVERSE LENGTH=283 | 201606)

HSP 1 Score: 163.696 bits (413), Expect = 6.362e-48
Identity = 90/237 (37.97%), Postives = 143/237 (60.34%), Query Frame = 0 
Query:   87 FQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTS-LLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGI----SEVKKHTSLLTCSVENKLIPRIDYFQK-IGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF 317
            F+EK++YL+ + +D    ++ +P +  A +  + S    L+S   +   + RIL M P +LT  P S +LP+  FL  E  ++  D+ K I+R PRLL  +V+ QLRP L FL+++G     +   ++T LL  +VE  LIP+I+Y ++ +GF+  +   M  R P L  YS+  N   K+ +F+ EM  D++E++ FPQYFSFSLE +IKPRH++  E G+  PL  +LK S+ +F
Sbjct:   32 FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 268
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT2G03050.2 (| Mitochondrial transcription termination factor family protein | Chr2:900094-900948 REVERSE LENGTH=284 | 201606)

HSP 1 Score: 163.31 bits (412), Expect = 7.116e-48
Identity = 90/237 (37.97%), Postives = 143/237 (60.34%), Query Frame = 0 
Query:   87 FQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTS-LLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGI----SEVKKHTSLLTCSVENKLIPRIDYFQK-IGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF 317
            F+EK++YL+ + +D    ++ +P +  A +  + S    L+S   +   + RIL M P +LT  P S +LP+  FL  E  ++  D+ K I+R PRLL  +V+ QLRP L FL+++G     +   ++T LL  +VE  LIP+I+Y ++ +GF+  +   M  R P L  YS+  N   K+ +F+ EM  D++E++ FPQYFSFSLE +IKPRH++  E G+  PL  +LK S+ +F
Sbjct:   33 FREKLIYLQDLNVDPHKALRVNPSLRSAPISSVVSVETLLSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLISSVDYQLRPALTFLKTLGFVGRDTITSRNTVLLVSNVERTLIPKIEYLEEGLGFTREEVAKMVVRSPALLTYSVDNNLVPKVEFFIEEMRGDVKELKRFPQYFSFSLERKIKPRHRLLKEHGILMPLSEMLKVSDGQF 269
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT3G18870.1 (| Mitochondrial transcription termination factor family protein | Chr3:6508515-6509339 REVERSE LENGTH=274 | 201606)

HSP 1 Score: 115.931 bits (289), Expect = 5.445e-30
Identity = 66/208 (31.73%), Postives = 113/208 (54.33%), Query Frame = 0 
Query:  121 STVDFLASLSFTTLELRRILSMCPHIL--TVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEV----KKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 322
            S V+ L S   +  +  R++ +CP +   T   + L P+F FL  E   +  + + +I   P +L  +VE  LRPTL +L+ +G+  +    K +  +L   VE KL  ++ + + IGF H +   +  R P +F YS+++N   K  + + +M R+L E+++FPQYF+FSL  RI+PRH    +K V   L  +L   + +F S+ +
Sbjct:   67 SAVNLLKSKGISDEDFPRLVFLCPQLFSPTFDISKLDPVFDFLTGELGASAEESRGLIVNCPNILFSDVEYCLRPTLVYLKELGVRNLNRASKTNAHVLNTRVE-KLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDNLRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQKFYSKWK 273
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT1G78930.1 (| Mitochondrial transcription termination factor family protein | Chr1:29678285-29680648 REVERSE LENGTH=591 | 201606)

HSP 1 Score: 103.219 bits (256), Expect = 5.316e-24
Identity = 70/262 (26.72%), Postives = 123/262 (46.95%), Query Frame = 0 
Query:   65 KFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESI-GLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISE------VKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRS 319
            K+P I S    P +    SH        Y ES+  +D    I+  P ++  S  +++  V     L      + +++   P +L  KP   L +  FL  +       + +++ R P +  C++E  L+  L FL   G+S       +KK+   L    +  ++PR+ Y  +IG S R+   M  +F P+  YSI +    K  + +  M + +RE+ E+P+YFS+SLE RIKPR ++   + +   L  +L  ++ EF +
Sbjct:  323 KYPWILS----PSIQENYSHIG---SFFYSESVLKMDIDHAIRRWPLLLGCSASNMEMMVKEFDKLGVRDKRMGKVIPKMPQLLLCKPQEFLKVVCFL-EDLGFQKEIVGQILCRCPEIFGCSIEKTLQKKLIFLTRFGVSTTHFPRIIKKYPEFLIYDADKTVLPRLKYLMEIGISEREIAFMIRKFSPILGYSIDKVLRPKFEFLVNSMEKPVREVIEYPRYFSYSLEKRIKPRFRVLKGRNIECTLQEMLGKNDEEFAA 576
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT4G14605.2 (| Mitochondrial transcription termination factor family protein | Chr4:8378815-8380564 FORWARD LENGTH=493 | 201606)

HSP 1 Score: 100.908 bits (250), Expect = 2.718e-23
Identity = 69/222 (31.08%), Postives = 114/222 (51.35%), Query Frame = 0 
Query:  100 DFFSLIQHHPPIIFASLHD-LKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGIS-EVKKHT--SLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF 317
            D  +++   P I   SL D LK T+ FL +L     +  +I+S  P ILT     L     FL  +  +    + +++ R P +++ +VE +LRPT+ + +S+ +   V  H        S+E+ L P  ++F + GF   +   M  R+  L+ +S+KEN   K +YF   M     E+ +FPQ+F +SL+ RIKPR+++    GV   L  +L  S +EF
Sbjct:  248 DIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFL-SQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT4G14605.1 (| Mitochondrial transcription termination factor family protein | Chr4:8378815-8380564 FORWARD LENGTH=493 | 201606)

HSP 1 Score: 100.908 bits (250), Expect = 2.718e-23
Identity = 69/222 (31.08%), Postives = 114/222 (51.35%), Query Frame = 0 
Query:  100 DFFSLIQHHPPIIFASLHD-LKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGIS-EVKKHT--SLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF 317
            D  +++   P I   SL D LK T+ FL +L     +  +I+S  P ILT     L     FL  +  +    + +++ R P +++ +VE +LRPT+ + +S+ +   V  H        S+E+ L P  ++F + GF   +   M  R+  L+ +S+KEN   K +YF   M     E+ +FPQ+F +SL+ RIKPR+++    GV   L  +L  S +EF
Sbjct:  248 DIPTILCKRPQICGISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILTYSRQKLTSTVEFL-SQTGLTEEQIGRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDVAVLLHRCPQTFGLSIESNLKPVTEFFLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQT-MDYPKSELVKFPQFFGYSLQERIKPRYELVQRSGVRLLLNQVLSLSGIEF 467
[Close]
BLAST of GhM_D13G1663.1 vs. Araport11
Match: AT5G55580.1 (| Mitochondrial transcription termination factor family protein | Chr5:22515601-22517408 FORWARD LENGTH=496 | 201606)

HSP 1 Score: 96.6709 bits (239), Expect = 6.645e-22
Identity = 65/244 (26.64%), Postives = 125/244 (51.23%), Query Frame = 0 
Query:   88 QEKMLYLESIGL---DFFSLIQHHPPII-FASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVK-PTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFL-QSIG------ISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVE-----KGVCFPLPALLKTSE 314
            QE++ YL S+G+   D   ++   P I+ +   ++LK+ + FL  L     ++ +I++  P + +     SL P   +L+ E  +  +D+ KV+   P++L   ++        FL + +G      +  VKKH  LL  S+++  +PRI++ + IG  +   + +      + + S+++N + K  Y + E+  ++  + ++P Y S SL+ RI+PRH+  VE     KG  FPL +L+   E
Sbjct:  220 QERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQIVAATPSLFSYSVENSLRPTIRYLIEEVGIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGAPRDSVVKMVKKHPQLLHYSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHILTKYPMYLSLSLDQRIRPRHRFLVELKKVRKG-PFPLSSLVPNDE 462
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A5D2S2P9_GOSMU (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_D13G157400v1 PE=3 SV=1)

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A1U8KSW6_GOSHI (uncharacterized protein LOC107920375 OS=Gossypium hirsutum OX=3635 GN=LOC107920375 PE=3 SV=1)

HSP 1 Score: 690.649 bits (1781), Expect = 0.000e+0
Identity = 344/344 (100.00%), Postives = 344/344 (100.00%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A0D2U1T2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_013G151800 PE=3 SV=1)

HSP 1 Score: 688.337 bits (1775), Expect = 0.000e+0
Identity = 343/344 (99.71%), Postives = 344/344 (100.00%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLE+RIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLESRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A5J5NLY9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_D13G154400v1 PE=3 SV=1)

HSP 1 Score: 687.182 bits (1772), Expect = 0.000e+0
Identity = 342/344 (99.42%), Postives = 343/344 (99.71%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAH+NGSDLKKVINRRPRLLACNVETQLR TLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHINGSDLKKVINRRPRLLACNVETQLRSTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A5D2HXT1_GOSTO (Uncharacterized protein OS=Gossypium tomentosum OX=34277 GN=ES332_D13G164200v1 PE=3 SV=1)

HSP 1 Score: 686.797 bits (1771), Expect = 0.000e+0
Identity = 342/344 (99.42%), Postives = 343/344 (99.71%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDF LLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALL+TSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFSLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLRTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A5D1ZYQ4_GOSDA (Uncharacterized protein OS=Gossypium darwinii OX=34276 GN=ES288_D13G165000v1 PE=3 SV=1)

HSP 1 Score: 684.485 bits (1765), Expect = 0.000e+0
Identity = 341/344 (99.13%), Postives = 342/344 (99.42%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAH+NGSDLKKVINR PRLLACNVETQLR TLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI
Sbjct:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHINGSDLKKVINRWPRLLACNVETQLRSTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A6P4N2W6_GOSAR (transcription termination factor MTEF1, chloroplastic OS=Gossypium arboreum OX=29729 GN=LOC108461358 PE=3 SV=1)

HSP 1 Score: 673.7 bits (1737), Expect = 0.000e+0
Identity = 335/344 (97.38%), Postives = 337/344 (97.97%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLP LPKNNPFPPLL PHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKP+PK PQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS+SFTTLELRRILSMCPHILTVK TSLLPIFTFLLRE HVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWC K CDI
Sbjct:    1 MSLISLSHAMQDTLPFLPKNNPFPPLLPPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPHPKIPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKSTSLLPIFTFLLREVHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCAKACDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A1U8K4D2_GOSHI (uncharacterized protein LOC107913339 OS=Gossypium hirsutum OX=3635 GN=LOC107913339 PE=3 SV=1)

HSP 1 Score: 671.774 bits (1732), Expect = 0.000e+0
Identity = 335/344 (97.38%), Postives = 337/344 (97.97%), Query Frame = 0 
Query:    1 MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            MSLISLSHAMQDTLP LPKNNPFPPLL PHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKP+PK PQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS+SFTTLELRRILSMCPHILTVK TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEF SRLEVCCNSTLPLKGSPLWC K CDI
Sbjct:    1 MSLISLSHAMQDTLPFLPKNNPFPPLLPPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPHPKIPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKSTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFCSRLEVCCNSTLPLKGSPLWCAKACDI 344
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A2P5YN31_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA03589 PE=3 SV=1)

HSP 1 Score: 612.068 bits (1577), Expect = 0.000e+0
Identity = 306/313 (97.76%), Postives = 308/313 (98.40%), Query Frame = 0 
Query:   10 MQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 322
            MQDTLP LPKNNPFPPLL PHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKP+PK PQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLAS+SFTTLELRRILSMCPHILTVK TSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLR TLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE
Sbjct:    1 MQDTLPFLPKNNPFPPLLPPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPHPKIPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASMSFTTLELRRILSMCPHILTVKSTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRSTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLE 313
[Close]
BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Match: A0A6A2ZFQ6_HIBSY (2-cysteine peroxiredoxin B OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110930pilonHSYRG00034 PE=3 SV=1)

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 275/335 (82.09%), Postives = 300/335 (89.55%), Query Frame = 0 
Query:   10 MQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSSRTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLDFFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVKPTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQSIGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFNYSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI 344
            M+DTLP LP+ NP        HH FP LSR +NLHFPT SS+TITP SLPPK +P+ P I S  PPPP+PPP S SDFQEKMLYL+SIGLD FSL+Q HPPII ASLHDLKSTV+FL SL+FTTLEL RILSMCPHILT+KP+SLLPIFTFLLREA VNGSDLK+VINRRPRLLACNVETQLRPTLYFLQSIGISE+++HTSLL+CSVENK IPR+DYFQKIGFSHR++ISMF RFP LFNYSIKENYE KLNYF+VEMGRDLREI+EFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSE+EFRSRLEVCCNSTLPLKGSPL C+K CDI
Sbjct:    1 MRDTLPFLPQTNPLLSSHHHKHHHFPSLSRHRNLHFPTISSKTITPASLPPKTHPQLPSI-SHPPPPPLPPPTSRSDFQEKMLYLDSIGLDLFSLVQRHPPIISASLHDLKSTVEFLFSLNFTTLELTRILSMCPHILTIKPSSLLPIFTFLLREARVNGSDLKRVINRRPRLLACNVETQLRPTLYFLQSIGISEIRRHTSLLSCSVENKFIPRVDYFQKIGFSHRKSISMFRRFPQLFNYSIKENYEHKLNYFVVEMGRDLREIKEFPQYFSFSLENRIKPRHQICVEKGVCFPLPALLKTSEIEFRSRLEVCCNSTLPLKGSPLSCSKHCDI 334
The following BLAST results are available for this feature:
BLAST of GhM_D13G1663.1 vs. NCBI nr
Analysis Date: 2022-02-08 (BLASTP of HEAU v1.0 Gossypium hirsutum (AD1) proteins vs NCBI nr )
Total hits: 10
Match NameE-valueIdentityDescription
ref|XP_016705554.1|0.000e+0100.00transcription termination factor MTEF1, chloroplas... [more]
ref|XP_012463927.1|0.000e+099.71PREDICTED: uncharacterized protein LOC105783181 [G... [more]
gb|KAB1995339.1|0.000e+099.42hypothetical protein ES319_D13G154400v1 [Gossypium... [more]
gb|TYH35016.1|0.000e+099.42hypothetical protein ES332_D13G164200v1 [Gossypium... [more]
gb|TYG37736.1|0.000e+099.13hypothetical protein ES288_D13G165000v1 [Gossypium... [more]
ref|XP_017616678.1|0.000e+097.38PREDICTED: transcription termination factor MTEF1,... [more]
ref|XP_016697381.1|0.000e+097.38transcription termination factor MTEF1, chloroplas... [more]
gb|PPS16992.1|0.000e+097.76hypothetical protein GOBAR_AA03589 [Gossypium barb... [more]
ref|XP_039016026.1|0.000e+082.09transcription termination factor MTEF1, chloroplas... [more]
ref|XP_022766064.1|2.055e-17679.23transcription termination factor MTEF1, chloroplas... [more]
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BLAST of GhM_D13G1663.1 vs. ExPASy Swiss-Prot
Analysis Date: 2022-02-09 (BLASTP of HEAU v1.0 Gossypium hirsutum (AD1) proteins vs UniProt Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
MTEF1_ARATH6.955e-4737.97Transcription termination factor MTEF1, chloroplas... [more]
MTEF5_ARATH2.657e-2231.08Transcription termination factor MTERF5, chloropla... [more]
MTEF9_ARATH6.495e-2126.64Transcription termination factor MTERF9, chloropla... [more]
MTEF2_ARATH1.058e-1928.03Transcription termination factor MTERF2, chloropla... [more]
MTEF6_ARATH8.003e-1525.11Transcription termination factor MTERF6, chloropla... [more]
MTEF4_MAIZE4.110e-1320.23Transcription termination factor MTERF4, chloropla... [more]
MTEF4_ORYSJ4.446e-1326.38Transcription termination factor MTERF4, chloropla... [more]
MTEF4_ARATH1.624e-1124.90Transcription termination factor MTERF4, chloropla... [more]
MTEF8_ARATH2.250e-1025.32Transcription termination factor MTERF8, chloropla... [more]
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BLAST of GhM_D13G1663.1 vs. Araport11
Analysis Date: 2022-02-09 (BLASTP of HEAU v1.0 Gossypium hirsutum (AD1) proteins vs arabidopsis Araport11)
Total hits: 10
Match NameE-valueIdentityDescription
AT2G36000.16.862e-10654.11| Mitochondrial transcription termination factor f... [more]
AT2G36000.24.915e-10054.28| Mitochondrial transcription termination factor f... [more]
AT2G34620.14.948e-5441.67| Mitochondrial transcription termination factor f... [more]
AT2G03050.16.362e-4837.97| Mitochondrial transcription termination factor f... [more]
AT2G03050.27.116e-4837.97| Mitochondrial transcription termination factor f... [more]
AT3G18870.15.445e-3031.73| Mitochondrial transcription termination factor f... [more]
AT1G78930.15.316e-2426.72| Mitochondrial transcription termination factor f... [more]
AT4G14605.22.718e-2331.08| Mitochondrial transcription termination factor f... [more]
AT4G14605.12.718e-2331.08| Mitochondrial transcription termination factor f... [more]
AT5G55580.16.645e-2226.64| Mitochondrial transcription termination factor f... [more]
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BLAST of GhM_D13G1663.1 vs. ExPASy TrEMBL
Analysis Date: 2022-02-09 (BLASTP of HEAU v1.0 Gossypium hirsutum (AD1) proteins vs UniProt TrEMBL )
Total hits: 10
Match NameE-valueIdentityDescription
A0A5D2S2P9_GOSMU0.000e+0100.00Uncharacterized protein OS=Gossypium mustelinum OX... [more]
A0A1U8KSW6_GOSHI0.000e+0100.00uncharacterized protein LOC107920375 OS=Gossypium ... [more]
A0A0D2U1T2_GOSRA0.000e+099.71Uncharacterized protein OS=Gossypium raimondii OX=... [more]
A0A5J5NLY9_GOSBA0.000e+099.42Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A5D2HXT1_GOSTO0.000e+099.42Uncharacterized protein OS=Gossypium tomentosum OX... [more]
A0A5D1ZYQ4_GOSDA0.000e+099.13Uncharacterized protein OS=Gossypium darwinii OX=3... [more]
A0A6P4N2W6_GOSAR0.000e+097.38transcription termination factor MTEF1, chloroplas... [more]
A0A1U8K4D2_GOSHI0.000e+097.38uncharacterized protein LOC107913339 OS=Gossypium ... [more]
A0A2P5YN31_GOSBA0.000e+097.76Uncharacterized protein OS=Gossypium barbadense OX... [more]
A0A6A2ZFQ6_HIBSY0.000e+082.092-cysteine peroxiredoxin B OS=Hibiscus syriacus OX... [more]
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InterPro
Analysis Name: InterProScan Analysis for HEAU v1.0 Gossypium hirsutum (AD1) proteins
Date Performed: 2022-02-08
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 150..325
e-value: 3.2E-37
score: 130.1
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 93..204
e-value: 9.9E-12
score: 44.4
coord: 162..317
e-value: 1.3E-31
score: 109.7
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 71..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..85
NoneNo IPR availablePANTHERPTHR13068:SF46OS03G0360600 PROTEINcoord: 71..331

Sequences
The following sequences are available for this feature:

mRNA sequence

>GhM_D13G1663.1_HEAU-NDM8_v1 ID=GhM_D13G1663.1_HEAU-NDM8_v1; Name=GhM_D13G1663.1; organism=Gossypium hirsutum; type=mRNA; length=1035bp
ATGTCACTTATCTCTCTCTCACACGCCATGCAAGACACACTCCCTGTCCT
CCCCAAAAACAACCCTTTCCCTCCCTTACTTTCCCCCCACCACCATGATT
TCCCCCTACTTTCTCGCCCCAAAAACCTCCATTTCCCTACTTTTTCTTCT
AGAACAATCACCCCCACTTCTCTACCTCCCAAACCCAATCCCAAATTCCC
CCAAATCCCTTCAACTTCTCCGCCACCACCAATGCCACCACCAAACTCCC
ACTCTGACTTCCAAGAGAAAATGCTTTACCTCGAGTCCATAGGCCTTGAT
TTTTTCTCTCTGATCCAACACCACCCTCCCATCATATTTGCTTCTCTCCA
TGATCTGAAATCAACCGTTGATTTTCTAGCCTCCTTGAGCTTCACTACGC
TCGAGCTACGTCGAATCCTCTCCATGTGCCCCCATATCCTAACCGTGAAA
CCAACTTCTCTCCTCCCTATCTTCACTTTCCTTCTCCGCGAAGCGCACGT
CAACGGCTCCGACTTGAAGAAAGTTATCAACAGACGGCCCAGATTACTCG
CATGCAACGTGGAGACTCAGCTCCGTCCCACCCTATATTTCCTACAAAGC
ATCGGAATCTCTGAGGTAAAAAAGCACACTTCCTTACTGACTTGCAGTGT
GGAAAATAAACTGATCCCTCGAATCGATTACTTCCAAAAAATCGGATTTT
CTCACAGACAAACAATATCGATGTTCTGTAGATTTCCTCCACTGTTTAAT
TACAGTATTAAGGAAAACTACGAGCTGAAATTAAATTATTTCATGGTGGA
AATGGGGAGGGATTTGAGAGAAATTAGAGAGTTCCCTCAGTATTTTTCTT
TTAGCTTGGAAAATAGGATAAAGCCAAGGCACCAAATTTGTGTTGAAAAA
GGGGTTTGTTTTCCTTTGCCTGCTTTGTTAAAGACAAGTGAAGTTGAGTT
CCGCAGTAGATTAGAGGTTTGTTGTAATTCCACCTTACCATTGAAGGGGT
CTCCTTTATGGTGTACAAAAGTTTGTGATATTTAA
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protein sequence of GhM_D13G1663.1_HEAU-NDM8_v1

>GhM_D13G1663.1_HEAU-NDM8_v1 ID=GhM_D13G1663.1_HEAU-NDM8_v1; Name=GhM_D13G1663.1_HEAU-NDM8_v1; organism=Gossypium hirsutum; type=polypeptide; length=345bp
MSLISLSHAMQDTLPVLPKNNPFPPLLSPHHHDFPLLSRPKNLHFPTFSS
RTITPTSLPPKPNPKFPQIPSTSPPPPMPPPNSHSDFQEKMLYLESIGLD
FFSLIQHHPPIIFASLHDLKSTVDFLASLSFTTLELRRILSMCPHILTVK
PTSLLPIFTFLLREAHVNGSDLKKVINRRPRLLACNVETQLRPTLYFLQS
IGISEVKKHTSLLTCSVENKLIPRIDYFQKIGFSHRQTISMFCRFPPLFN
YSIKENYELKLNYFMVEMGRDLREIREFPQYFSFSLENRIKPRHQICVEK
GVCFPLPALLKTSEVEFRSRLEVCCNSTLPLKGSPLWCTKVCDI*
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mRNA from alignment at D13:47846444..47850176+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>GhM_D13G1663.1_HEAU-NDM8_v1 ID=GhM_D13G1663.1_HEAU-NDM8_v1; Name=GhM_D13G1663.1; organism=Gossypium hirsutum; type=mRNA; length=3733bp; location=Sequence derived from: D13:47846444..47850176+ (Gossypium hirsutum
GAACCAAGGAAGTTGGGGTGAAGTCAGATTGGCTTTGATGGCCCAATCAG
GTAGGCTAAATTTGTCGGAACCTGAAGAACTGTCTTTAGAAATCCAGAAT
TTGAGATAGGCAATCTGGGAGACGATCTTCAAGTCATAAAATTTTTGAAG
CCTTATCCTCTTTCTCTCTCATCTCTGTGTGTGTTTCTTCCCGAACCAGA
AAAAGGAAGCGCCACTCACAAATAGCCGGCAATGTACACGCCCACACTCC
ATGCAACACACATTCCTTTCGCCGCCTAAAAACAATCCTTTCCCGCCACC
CCCACCCTAAACACCATCATTTTCCCTTACTTTCCCTCCATTTTCTCTCT
TTCTGTCTCTAAGAAGCTATGATTTTTATCTCTCTCTATCATCACAACAA
TAAGTTTTCTCTCAACAATTCATCTTGGTATGTAATCATTTTTGTTTTTA
ATTTCTGTTTAAATTTGTTCAAAAAAGGTTTAGTTTTGTTTTCCTTTTGT
TTTTAATGGTTTTGAGCTTTTGGGATTGTTTTGATTAATGTGTTTGAGTT
TTTGTGATTCTTGGTTTTATTGTATTTTCCCTTCCCTTCGAAAAAGAATC
AAGCTTGATGTTTTTTCTAACTAAAGGTTTATTTTTCTGTGATGAGTTTT
TCTGGAAACTGGTTTTGAGCTTTTTCTTTTGTTTAAACTGATGAATTGTA
TACCATTTGAGCGAATTCCTTGTGTAATAACTTGATTTCCATTAGAACTT
CAGAAATTGGAATTTAGATTCATATTGAATGAAAATGGGATCCGTTACAC
GATTTCAGAATCTTGGTCTTATTAGGAACCCGAAAACTTTAATTAATTGT
TGAAAATGTAGCTTACGCTATTTGTTGAATCCGGTCAGTAAGGAGTGAGC
TTGAAGTTCTTTGAGAAGAGTTAGACTACGGGTTAGCTTTTGTTGGGATT
GTTTGATATTCTAATCCGTATTTGATAGGTTGATCATTGATGTCATAAGC
CTATAAATTTGTTCATATTCTGAAGTAGATGAAATTTTTATCCACCAAGT
AATTAGAGTTCTTTCTGATATCTATGGCAATGTTTGTTTCCAAAGATGTG
ACCTAATTTATACTTGGATTTCCTTTACTTGACATTATTTTGATTGTTAA
TTATGTCATCAAGTTCGAATTTTTGGCCGAATTTCTGGCATTTAGAGGTT
GGATTGTCTTAGTGATGTTATTTTTTATTGAATGTGTTGCATTCTATTCG
TAGTTGCTAGTTTAGAACAAGATAGATCGATCTGAACATTTAAGCTGAAG
TTTTATATGGTATTAGAGTCTTATTTGTACTTTTACCTCTCCAATTTCCT
TATTAGTGCAGAGATTACTGCTTTCAGTGACTGTAATGAAGAATTTGTGA
AGTTAAACACGGAAATATTAGTGTTCCTATTGACAATGTGGTAAGTTCCT
TGTCACTGAAAAGCGTTGCATCAATGAGTTATTAGTGATCCACAATCAAT
TAAAGATTTGTTTACTTTATCAACTCGAAAGTTGCATGATCTCCAGTAAA
CACTGCATTCTAGTAAGGGCTACGTTGGTGCTCAGCATTTTAGTTTTCTC
TTAAAGTCTTTGTAATTGTGTTTATAATAGCTTAGATTATAGTTATTTTG
TAGCAGCATCCGCTTTTGTAATTTTCTAATGATGTTTGTGCATTATAGTT
TAGCATGTGTTATTGCATCCGAGTTATATAAAACTTAACTGCAGGTTATT
CTTTATGCAGTTCTCTCTCCTTGCCTGGGTTCAAACAGATAGAAATTCGG
GTGCCTTTGGTGATTTGAAGTGTGCACTTATATCTGATGTCACTTATCTC
TCTCTCACACGCCATGCAAGACACACTCCCTGTCCTCCCCAAAAACAACC
CTTTCCCTCCCTTACTTTCCCCCCACCACCATGATTTCCCCCTACTTTCT
CGCCCCAAAAACCTCCATTTCCCTACTTTTTCTTCTAGAACAATCACCCC
CACTTCTCTACCTCCCAAACCCAATCCCAAATTCCCCCAAATCCCTTCAA
CTTCTCCGCCACCACCAATGCCACCACCAAACTCCCACTCTGACTTCCAA
GAGAAAATGCTTTACCTCGAGTCCATAGGCCTTGATTTTTTCTCTCTGAT
CCAACACCACCCTCCCATCATATTTGCTTCTCTCCATGATCTGAAATCAA
CCGTTGATTTTCTAGCCTCCTTGAGCTTCACTACGCTCGAGCTACGTCGA
ATCCTCTCCATGTGCCCCCATATCCTAACCGTGAAACCAACTTCTCTCCT
CCCTATCTTCACTTTCCTTCTCCGCGAAGCGCACGTCAACGGCTCCGACT
TGAAGAAAGTTATCAACAGACGGCCCAGATTACTCGCATGCAACGTGGAG
ACTCAGCTCCGTCCCACCCTATATTTCCTACAAAGCATCGGAATCTCTGA
GGTAAAAAAGCACACTTCCTTACTGACTTGCAGTGTGGAAAATAAACTGA
TCCCTCGAATCGATTACTTCCAAAAAATCGGATTTTCTCACAGACAAACA
ATATCGATGTTCTGTAGATTTCCTCCACTGTTTAATTACAGTATTAAGGA
AAACTACGAGCTGAAATTAAATTATTTCATGGTGGAAATGGGGAGGGATT
TGAGAGAAATTAGAGAGTTCCCTCAGTATTTTTCTTTTAGCTTGGAAAAT
AGGATAAAGCCAAGGCACCAAATTTGTGTTGAAAAAGGGGTTTGTTTTCC
TTTGCCTGCTTTGTTAAAGACAAGTGAAGTTGAGTTCCGCAGTAGATTAG
AGGTTTGTTGTAATTCCACCTTACCATTGAAGGGGTCTCCTTTATGGTGT
ACAAAAGTTTGTGATATTTAATACTATGATTCAACGTACAGTGAAAAAAA
AATTGATTTTTTTATGTGATTGGCTCCATTCTTGTGTGTTTCAATTTAAA
GCTGCAATGGATGGCACGGTAGGAATCCCTTCCCCTGAGAATCTAAATGC
AGTTTTAAAGTCACAAATCATGAAATGCAGGGATAGCATGGTGGAACCAT
CTCCCAGCCATCCGAAAGCACCCAAAGTAGATAAAAATAAAGATGAGTGG
CATGAGTAAAATTTAGATTGAGTGACAGTATTTGAAATAGTTTTTAGGGT
GATGCTAAAGCTAGTTTTGCTTGGGTATTTGTTGCTGGAAAGTTTTCATT
TGAGGGATAATTTGATATTTTCTCACTTTTCTCCTACAGGTTAATATAGT
ATAACTTGCTGCTGCAAATATAAGTCTTTGATTGCCTTAGGCCTTACATT
CATTCTCATATTCAAATGGTTTAGCTGTGTGTTAAAAGGAAGTCAAGCCT
AGGTTTTGGCATGATACATAATAACCAAAGGCACTTTTTACATATGTTCG
GAGAATAAGTGAGTTGAAACCCTGCCTCTCATCTGCAGAAAACTTGAGTT
TTCATCCAGTCATGGAGCATATCTATGAAATTAAGATGGTTCATGCTGTT
TTGTGGAGGTGTTAAGTAGTTGATATTGCGTTGTGAGGGCATAGACCAGC
TTGTAGTCTATAAATTTCTAGTAGAATGAAAATCTGAAAGAGAACTGTCG
AAACAAGCATTTGTTCATGCCCTTAATCAAAGGGATAAAAAGCAACTTTT
GGTTCCCTCAACTTCGGCCTTGCTATTTTTAGGTTATTCATTTTAATTCT
ACTTTGTAATCAGCTTAAGAGGTATCATCACTT
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Coding sequence (CDS) from alignment at D13:47846444..47850176+

>GhM_D13G1663.1_HEAU-NDM8_v1 ID=GhM_D13G1663.1_HEAU-NDM8_v1; Name=GhM_D13G1663.1; organism=Gossypium hirsutum; type=CDS; length=1035bp; location=Sequence derived from: D13:47846444..47850176+ (Gossypium hirsutum
ATGTCACTTATCTCTCTCTCACACGCCATGCAAGACACACTCCCTGTCCT
CCCCAAAAACAACCCTTTCCCTCCCTTACTTTCCCCCCACCACCATGATT
TCCCCCTACTTTCTCGCCCCAAAAACCTCCATTTCCCTACTTTTTCTTCT
AGAACAATCACCCCCACTTCTCTACCTCCCAAACCCAATCCCAAATTCCC
CCAAATCCCTTCAACTTCTCCGCCACCACCAATGCCACCACCAAACTCCC
ACTCTGACTTCCAAGAGAAAATGCTTTACCTCGAGTCCATAGGCCTTGAT
TTTTTCTCTCTGATCCAACACCACCCTCCCATCATATTTGCTTCTCTCCA
TGATCTGAAATCAACCGTTGATTTTCTAGCCTCCTTGAGCTTCACTACGC
TCGAGCTACGTCGAATCCTCTCCATGTGCCCCCATATCCTAACCGTGAAA
CCAACTTCTCTCCTCCCTATCTTCACTTTCCTTCTCCGCGAAGCGCACGT
CAACGGCTCCGACTTGAAGAAAGTTATCAACAGACGGCCCAGATTACTCG
CATGCAACGTGGAGACTCAGCTCCGTCCCACCCTATATTTCCTACAAAGC
ATCGGAATCTCTGAGGTAAAAAAGCACACTTCCTTACTGACTTGCAGTGT
GGAAAATAAACTGATCCCTCGAATCGATTACTTCCAAAAAATCGGATTTT
CTCACAGACAAACAATATCGATGTTCTGTAGATTTCCTCCACTGTTTAAT
TACAGTATTAAGGAAAACTACGAGCTGAAATTAAATTATTTCATGGTGGA
AATGGGGAGGGATTTGAGAGAAATTAGAGAGTTCCCTCAGTATTTTTCTT
TTAGCTTGGAAAATAGGATAAAGCCAAGGCACCAAATTTGTGTTGAAAAA
GGGGTTTGTTTTCCTTTGCCTGCTTTGTTAAAGACAAGTGAAGTTGAGTT
CCGCAGTAGATTAGAGGTTTGTTGTAATTCCACCTTACCATTGAAGGGGT
CTCCTTTATGGTGTACAAAAGTTTGTGATATTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription