g.barbadense_cottongen_reftransV1_0097352, g.barbadense_cottongen_reftransV1_0097352 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0D2NT15_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G258400 PE=4 SV=1) HSP 1 Score: 1005.36 bits (2598), Expect = 0.000e+0 Identity = 484/493 (98.17%), Postives = 488/493 (98.99%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSAHDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELERPQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKDDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MGASLLTTFSMENHHPSTLLSMDSSAHDEFDLDKNRQSILS PPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPAL EKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNL+ALSEEDRKKWIELTGRDLNFTIP EASDFSSWRNLPNTDFELERPQIIKNIPHSHSRKLLNGSGLNLSTQS+SHTYGDGTDLSLVSNKRRKDDDCFLPVIPP DRIPDMEIHPSEPHWLNDF+GVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMP IKRHNRTFKLTDP+PEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT Sbjct: 1 MGASLLTTFSMENHHPSTLLSMDSSAHDEFDLDKNRQSILSRPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALKEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLMALSEEDRKKWIELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPQIIKNIPHSHSRKLLNGSGLNLSTQSSSHTYGDGTDLSLVSNKRRKDDDCFLPVIPPPDRIPDMEIHPSEPHWLNDFSGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPLIKRHNRTFKLTDPSPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 493
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0D2MG39_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G258300 PE=4 SV=1) HSP 1 Score: 943.725 bits (2438), Expect = 0.000e+0 Identity = 457/493 (92.70%), Postives = 469/493 (95.13%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSAHDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELERPQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKDDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MGASLLTTFSMENHHPSTLLSMDSSAHDEFDLDK+RQSILS PPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKC KRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDK DLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGER FPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNL+ALSEEDRKKW+ELTGR LNFTIP EASDFSSWRNLPNTDFELERP IIK++ LNLSTQS+SH DGTDLSLVSNKRRKDDDC+LPVIPPSDRIPDMEIHPSEPHWLNDF+GVMK+ YGPVTAAKAIYED+AGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSC+ST+GMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT Sbjct: 1 MGASLLTTFSMENHHPSTLLSMDSSAHDEFDLDKSRQSILSRPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCAKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKLDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERLFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLMALSEEDRKKWVELTGRGLNFTIPPEASDFSSWRNLPNTDFELERPPIIKSV-------------LNLSTQSSSHMDSDGTDLSLVSNKRRKDDDCYLPVIPPSDRIPDMEIHPSEPHWLNDFSGVMKNAYGPVTAAKAIYEDKAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCVSTTGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 480
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A061ES98_THECC (HSP20-like chaperones superfamily protein OS=Theobroma cacao GN=TCM_021960 PE=4 SV=1) HSP 1 Score: 868.996 bits (2244), Expect = 0.000e+0 Identity = 422/501 (84.23%), Postives = 455/501 (90.82%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELERPQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-------DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLML 2326 MG SLLT SMENHHPSTLLSMDSSA HDE DL+ NRQ +LS PPDINLPLSAERSPPPQQ WNSDQCDILDVGL SQ YETESYL V K GRKC KRVDSIWGAW FFSFYFKPALN+KSKAKI+RDSNGV+GFDKSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFS DKGF+RSHRMQRKHYRGLSNPQCVHGIE++PSPNL+AL EE++K+W++LTGRDLNFTIP EASDFSSWRNLPNTDFELERP IK++ +SHS+KLLNGSGLNLSTQ +SH+ GDG DLSLVSNKRRK D+D L VIPPSDRIPDMEIHPSEP WLNDF+GVMK+ YGPVTAAK IYEDEAGYLIIISLPFVDLQRVKVSWRNTLT GIIK+SC+STS MPFIKRH+RTFKLTDPA EHCPPGEFVREIPLSTRIPEDA+IEAY+D PGSVLEIMVPKLR++PEEHE+RVCLRP G+DLML Sbjct: 1 MGDSLLTALSMENHHPSTLLSMDSSASSHDELDLEMNRQIVLSRPPDINLPLSAERSPPPQQ-WNSDQCDILDVGLHSQVYETESYLTVPKPGRKCAKRVDSIWGAWFFFSFYFKPALNDKSKAKIIRDSNGVTGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSADKGFVRSHRMQRKHYRGLSNPQCVHGIEVIPSPNLMALDEEEQKRWMDLTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPTIKSVSNSHSKKLLNGSGLNLSTQPSSHSNGDGMDLSLVSNKRRKDFFPHGSDEDFILSVIPPSDRIPDMEIHPSEPLWLNDFSGVMKNVYGPVTAAKTIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTRGIIKVSCVSTSRMPFIKRHDRTFKLTDPASEHCPPGEFVREIPLSTRIPEDANIEAYYDRPGSVLEIMVPKLRVMPEEHEVRVCLRPNLGGSDLML 500
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0D2TM45_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G103100 PE=4 SV=1) HSP 1 Score: 867.84 bits (2241), Expect = 0.000e+0 Identity = 418/505 (82.77%), Postives = 456/505 (90.30%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER---PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG SLLT MENHHPSTLLSMDSSA HDE DL+ NRQ++LS PPDINLPLSAERSPPPQ PWNSDQCDILDVGL SQA+E ES+L K RK KRVDSIWGAWLFFSFYFKPALN+KSK KI+RDSNGVSGFDKSDLKLD+FMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRK YRGLSNPQC+HGIE+VP+PNL+ALSEEDRK+W+ELTGRDLNFT+P EASDFSSWRNLPNTDFELER P IK++ +SHS+KLLNGSGLNL +Q +SH+ GDG DL+LVSNKRRK+ DDC+LP +PPSDRI DMEIHPSEPHWL DF+G+MK+ YGPVTAAK IYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIK+SC+STSGMPFIKRH RTFKLTDPA EHC PGEFVREIPLSTRIPEDA+IEAYHDGPGSVLEIMVPKLR+VPEEHE+ VCLRPK +G+DLMLT Sbjct: 1 MGDSLLTALLMENHHPSTLLSMDSSASSHDELDLEMNRQTVLSRPPDINLPLSAERSPPPQ-PWNSDQCDILDVGLSSQAFEVESFLAAPKVERKFAKRVDSIWGAWLFFSFYFKPALNDKSKGKIIRDSNGVSGFDKSDLKLDIFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKQYRGLSNPQCLHGIEVVPAPNLMALSEEDRKRWMELTGRDLNFTVPPEASDFSSWRNLPNTDFELERPVPPPSIKSVSNSHSKKLLNGSGLNLCSQPSSHSNGDGMDLTLVSNKRRKELFRHRNNDDCYLPAVPPSDRILDMEIHPSEPHWLKDFSGIMKNVYGPVTAAKTIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKISCVSTSGMPFIKRHERTFKLTDPASEHCSPGEFVREIPLSTRIPEDANIEAYHDGPGSVLEIMVPKLRVVPEEHEVLVCLRPKLIGSDLMLT 504
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0B0PU46_GOSAR (Lipid A export ATP-binding/permease MsbA OS=Gossypium arboreum GN=F383_03680 PE=4 SV=1) HSP 1 Score: 865.529 bits (2235), Expect = 0.000e+0 Identity = 417/505 (82.57%), Postives = 457/505 (90.50%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER---PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRKD-------DDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG SLLT MENHHPSTLLSMDSSA HDE DL+ NRQ++LS PPDINLPLSAERSPPPQ PWNSDQCDILDVGL SQA+E ESYL KA RK KRVDSIWGAWLFFSFYFKPALN+KSK KI+RDSNGVSGFDKSDLKLD+FMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRK YRGLSNPQC+HGIE+VP+PNL+A+SEEDRK+W+ELTGRDLNFT+P EASDFSSWRNLPNTDFELER P IK++ +SHS+KLLNGSGLNL +Q +SH+ GDG DL+LVSNKRRK+ DDC+LP IPP DR PDMEIHPSEPHWL DF+G+MK+ +GPVTAAK IYEDEAGYLIII+LPFVDLQRVKVSWRNTLTHGIIK+SC+STSGMPFIKRH+RTFKLTDPA EHC PGEFVREIPLSTRIPEDA+IEAYHDGPGSVLEIMVPKLR+VPEEHE+ VCLRPK +G+DLMLT Sbjct: 1 MGDSLLTALLMENHHPSTLLSMDSSASSHDELDLEMNRQTVLSRPPDINLPLSAERSPPPQ-PWNSDQCDILDVGLSSQAFEIESYLAAPKAERKFAKRVDSIWGAWLFFSFYFKPALNDKSKGKIIRDSNGVSGFDKSDLKLDIFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKQYRGLSNPQCLHGIEVVPAPNLMAVSEEDRKRWMELTGRDLNFTVPPEASDFSSWRNLPNTDFELERPVPPPSIKSVSNSHSKKLLNGSGLNLCSQPSSHSNGDGMDLTLVSNKRRKELFRHRNNDDCYLPAIPPYDRNPDMEIHPSEPHWLKDFSGIMKNVHGPVTAAKTIYEDEAGYLIIITLPFVDLQRVKVSWRNTLTHGIIKISCVSTSGMPFIKRHDRTFKLTDPASEHCSPGEFVREIPLSTRIPEDANIEAYHDGPGSVLEIMVPKLRVVPEEHEVLVCLRPKLIGSDLMLT 504
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: F6HLD7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g00140 PE=4 SV=1) HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0 Identity = 403/503 (80.12%), Postives = 447/503 (88.87%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-------DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG SLLT SMENHHPSTLLSMDSSA H++ DL+ NRQ IL+ PPDINLPLSAERSPPP PWNSDQCDIL+VGL Q YETES+L + KAGRKC KRVD IWGAW FFSFYFKPALNEKSKAKI+RDSNGVSGFDKSDLKL+VFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGER FPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIE+VPSPNLI + EE+RK+W+ELTGRD+NF+IP EASDFSSWRNLPNTDFELER P +K+ +SHS+KLLNGSGLNLSTQ ++H+ GDG DLS VS+KRRK DDDC+L V PPSDR+ DMEIHP+EP WLNDF+GVM++ YGPVTAAK IYED GYLIIISLPFVDLQRVKVSWRNTLTHGIIK+SC+STS PFIKRH+RTFKLTDP+ EHCPPGEF+REIPLSTRIPEDA+IEAY+DGPG+ LEI+VPKLR+ PEEHE+RVCLRP N+LMLT Sbjct: 1 MGDSLLTALSMENHHPSTLLSMDSSASSHEDLDLEMNRQIILTRPPDINLPLSAERSPPPP-PWNSDQCDILEVGLAPQIYETESFLTIPKAGRKCAKRVDCIWGAWFFFSFYFKPALNEKSKAKIIRDSNGVSGFDKSDLKLEVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERLFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLIGVDEEERKRWMELTGRDMNFSIPPEASDFSSWRNLPNTDFELERPPPPVKSNSNSHSKKLLNGSGLNLSTQPSNHSNGDGMDLSPVSSKRRKDFFPHGNDDDCYLAVNPPSDRVQDMEIHPNEPPWLNDFSGVMRNVYGPVTAAKTIYEDVEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSCVSTSRRPFIKRHDRTFKLTDPSSEHCPPGEFIREIPLSTRIPEDANIEAYYDGPGTTLEILVPKLRVGPEEHEVRVCLRPHLAANELMLT 502
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: B9SP16_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1248090 PE=4 SV=1) HSP 1 Score: 830.476 bits (2144), Expect = 0.000e+0 Identity = 408/503 (81.11%), Postives = 445/503 (88.47%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-------DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG SLLT SMENHHPSTLLSMDSSA H+E DL+ NRQ ILS PPDINLPLS ERSPPPQ WNSD CDILDVGL Q YETES+L V K GRKC KR+DSIWGAW FF+FYFKPALNEKSKAKIVRDSNGVS FDKSDLKL+VFMVQHDMENMYMWVFK++PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIE+VPSPNL+ L E++RK+W+ELTGRDLNFTIP +ASDFSSWRNLPNTDFELER P IKN +SHS+KLLNGSGLNLSTQ +SH+ GDG DLS VS+KRRK DDDC+L V PPSDR+ DME+HP+EP WL++ +GVMKS GPVTAAK +YEDE GYLIIISLPFVDLQRVKVSWRNTLTHGIIK+S +STS MPFIKRH+RTFKLTDP+ EHCPPGEFVREIPLSTRIPEDA+IEAY+DGPGSVLEI+VPKLR PEEHE+RVCLRP GNDLMLT Sbjct: 1 MGDSLLTALSMENHHPSTLLSMDSSASSHEELDLEMNRQIILSRPPDINLPLSVERSPPPQS-WNSDPCDILDVGLGQQVYETESFLNVPKVGRKCAKRIDSIWGAWFFFNFYFKPALNEKSKAKIVRDSNGVSRFDKSDLKLEVFMVQHDMENMYMWVFKDRPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLLGLDEDERKRWMELTGRDLNFTIPPDASDFSSWRNLPNTDFELERPPPPIKNASNSHSKKLLNGSGLNLSTQPSSHSNGDGMDLSPVSSKRRKDFFRHGGDDDCYLAVNPPSDRVADMELHPNEPQWLHEVSGVMKSVCGPVTAAKTVYEDEEGYLIIISLPFVDLQRVKVSWRNTLTHGIIKVSGVSTSCMPFIKRHDRTFKLTDPSSEHCPPGEFVREIPLSTRIPEDANIEAYYDGPGSVLEILVPKLREGPEEHEVRVCLRPHLGGNDLMLT 502
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: V4SNM4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011539mg PE=4 SV=1) HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0 Identity = 412/504 (81.75%), Postives = 442/504 (87.70%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-------DDDCFLPVIPPSDRIPDMEIHPSE-PHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG S LT SMENHHPSTLLSMDSSA HDE DL+ NRQ IL PPDINLPLSAERSPPPQ WN D CDILDVGL SQ YE ESYL + KAGRKC KRVDSIWGAW FFSFYFKPALNEKSKAKI+RDSNGVSGFDKSDLKLDVFMVQHDMEN+YMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIE+V SPNL+ L EE+RK+W+ELTGRDLNFTIP EASDFSSWRNLPNTDFELER P IK+ +S S+KLLNGSGLNLSTQ +SH+ G DLS S+KR+K DD+C+L V PSDRI DMEIHP E PHWLNDF+GVMK+ YGP TAAKAIYEDE GYLIIISLPFVDLQRVKVSWRNTLT GIIK+SC+STSGMPFIKRH+RTFKLTDPA EHCPPGEF+REIPLSTRIPEDA+IEAY+DG GSVLEIMVPKLR+ PEEHE+RVCLRP GNDLMLT Sbjct: 1 MGDSFLTALSMENHHPSTLLSMDSSASSHDELDLEMNRQVILPRPPDINLPLSAERSPPPQS-WNLDTCDILDVGLSSQGYEPESYLNIPKAGRKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIIRDSNGVSGFDKSDLKLDVFMVQHDMENIYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVSSPNLMVLDEEERKRWMELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPPPIKSASNSQSKKLLNGSGLNLSTQPSSHSNGVAMDLS-PSSKRKKDFFPHGNDDECYLAVNQPSDRIADMEIHPYEPPHWLNDFSGVMKNVYGPSTAAKAIYEDEEGYLIIISLPFVDLQRVKVSWRNTLTQGIIKVSCVSTSGMPFIKRHDRTFKLTDPASEHCPPGEFIREIPLSTRIPEDANIEAYYDGSGSVLEIMVPKLRVGPEEHEVRVCLRPHLSGNDLMLT 502
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A067KUU0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09052 PE=4 SV=1) HSP 1 Score: 825.854 bits (2132), Expect = 0.000e+0 Identity = 401/503 (79.72%), Postives = 441/503 (87.67%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELER-PQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-------DDDCFLPVIPPSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG SL T SMENHHPSTLLSMDSSA H+E DL+ NRQ LS PPDINLPLSAERSPPPQQPWNSD CDILDVGL Q YETES+L + K GRKC KRVDSIWGAW FFSFYFKPALNEKSKAKI+ +SN VSGFDKSDLKLDVFMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHGIE+VPSPNL+ L E+++K+W+ELTGRDLNFTIP EASDF SWRNLPNTDFELER P IK++ +SHS+KLLN SGLNLSTQ ++H+ G G DLS VS+KRRK DDDC+L + PPSD++ D E+H SEP WL+DF+GVMK+ YGPVTAAK IYEDE YLIIISLPFVDLQRVKV+WRNTLTHGIIK+S +STSGMPFIKRH+RTFKLTDP EHCPPGEF+REI LSTRIPEDA+IEAY+DGPGSVLEI+VPKLR PEEHE+RVCLRP GNDLMLT Sbjct: 1 MGDSLFTALSMENHHPSTLLSMDSSASSHEELDLEMNRQIALSRPPDINLPLSAERSPPPQQPWNSDPCDILDVGLGQQVYETESFLNIPKVGRKCAKRVDSIWGAWFFFSFYFKPALNEKSKAKIIHESNVVSGFDKSDLKLDVFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGIEVVPSPNLMGLDEDEKKRWMELTGRDLNFTIPPEASDFGSWRNLPNTDFELERPPPPIKSVSNSHSKKLLNVSGLNLSTQPSNHSNGAGMDLSPVSSKRRKDFFPHGSDDDCYLAINPPSDQMADRELHQSEPQWLHDFSGVMKNVYGPVTAAKTIYEDEESYLIIISLPFVDLQRVKVAWRNTLTHGIIKVSGVSTSGMPFIKRHDRTFKLTDPTSEHCPPGEFIREIQLSTRIPEDANIEAYYDGPGSVLEILVPKLREGPEEHEVRVCLRPHLGGNDLMLT 503
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Match: A0A0A0KZI9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G295450 PE=4 SV=1) HSP 1 Score: 824.313 bits (2128), Expect = 0.000e+0 Identity = 400/503 (79.52%), Postives = 443/503 (88.07%), Query Frame = 2 Query: 851 MGASLLTTFSMENHHPSTLLSMDSSA--HDEFDLDKNRQSILSLPPDINLPLSAERSPPPQQPWNSDQCDILDVGLCSQAYETESYLPVSKAGRKCTKRVDSIWGAWLFFSFYFKPALNEKSKAKIVRDSNGVSGFDKSDLKLDVFMVQHDMENMYMWVFKEKPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFIRSHRMQRKHYRGLSNPQCVHGIELVPSPNLIALSEEDRKKWIELTGRDLNFTIPLEASDFSSWRNLPNTDFELERPQIIKNIPHSHSRKLLNGSGLNLSTQSASHTYGDGTDLSLVSNKRRK-------DDDCFLPVIP-PSDRIPDMEIHPSEPHWLNDFNGVMKSTYGPVTAAKAIYEDEAGYLIIISLPFVDLQRVKVSWRNTLTHGIIKLSCLSTSGMPFIKRHNRTFKLTDPAPEHCPPGEFVREIPLSTRIPEDADIEAYHDGPGSVLEIMVPKLRMVPEEHEIRVCLRPKHVGNDLMLT 2329 MG S LT +ME+HHPSTLLSMDSSA HDE DL+ NRQ +L PPDINLPLSAERSPP QQPW+SD CDILDVGL SQ YETES+L K GRK KRVDSIWGAW FFSFYFKPA+N+KSKAKI+RDSNGVSGF+KSDL LD FMVQHDMENMYMWVFKE+PENALGKMQLRSYMNGHSRQGERPFPFSVDKGF+RSHRMQRKHYRGLSNPQCVHG+E+VPSP+L++L EEDRK+W ELTGRDLNFTIP EASDFSSWRNLPNTDFELERP +K+ +SHS+KLLNGS LNLSTQ ++H+ DG DLS VS+KR+K DDDC+L V SDRI DME+HP+EPHWLNDF+GVMK+ YGPVTAAK+IYEDE GYLIIISLPFVDL VKVSWRNTLTHGIIK+SC+STSG+PFIKRH+RTFKLTDP PEHCPPGEFVREIPL+TRIPEDA+IEAY+DGPGSVLEIMVP+LR+ PEEHE+RVC RP GNDLMLT Sbjct: 1 MGGSRLTALTMESHHPSTLLSMDSSASSHDELDLEMNRQVVLLRPPDINLPLSAERSPP-QQPWSSDPCDILDVGLGSQVYETESFLTAPKVGRKLVKRVDSIWGAWFFFSFYFKPAMNDKSKAKIIRDSNGVSGFEKSDLNLDTFMVQHDMENMYMWVFKERPENALGKMQLRSYMNGHSRQGERPFPFSVDKGFVRSHRMQRKHYRGLSNPQCVHGVEVVPSPSLMSLDEEDRKRWAELTGRDLNFTIPPEASDFSSWRNLPNTDFELERPPTLKSASNSHSKKLLNGSVLNLSTQPSNHSNCDGMDLSPVSSKRKKDFFSNGNDDDCYLAVNNHTSDRISDMEVHPTEPHWLNDFSGVMKNAYGPVTAAKSIYEDEEGYLIIISLPFVDLPSVKVSWRNTLTHGIIKVSCVSTSGLPFIKRHDRTFKLTDPFPEHCPPGEFVREIPLATRIPEDANIEAYYDGPGSVLEIMVPRLRVGPEEHEVRVCRRPHLGGNDLMLT 502 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0097352 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097352 ID=g.barbadense_cottongen_reftransV1_0097352; Name=g.barbadense_cottongen_reftransV1_0097352; organism=Gossypium barbadense; type=contig; length=2593bpback to top |