g.barbadense_cottongen_reftransV1_0097313, g.barbadense_cottongen_reftransV1_0097313 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: ATA1_ARATH (Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana GN=TA1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.219e-67 Identity = 72/115 (62.61%), Postives = 89/115 (77.39%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKET-TPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDD-TGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK I G++RT ACELG HGIRVN ISPHGVPTD+L++ YR F + EV ++ ++GSLL G+A TVEDVAQAA+FLAS + +GFIT HNLV+DGGYTSA S++ FIY Sbjct: 157 TLSKGAINGVVRTTACELGSHGIRVNSISPHGVPTDILVNAYRKFLNHDKLNVAEVTDIIAEKGSLLTGRAGTVEDVAQAALFLASQESSGFITGHNLVVDGGYTSATSTMRFIY 271 HSP 2 Score: 134.42 bits (337), Expect = 1.219e-67 Identity = 71/131 (54.20%), Postives = 101/131 (77.10%), Query Frame = -2 Query: 894 KLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1286 +LF ENGAYV++ADIL+ G ++A SIG Y+HCDV+KE+DVE+A++LA+ KG+LD++F+NAG+ SI +D++ V LVS+N+ G +H IKHAA AM++ GSIICTSSS+G+MGGL H Y++ Sbjct: 28 RLFTENGAYVIVADILENEGILVAESIGGCYVHCDVSKEADVEAAVELAMRRKGRLDVMFNNAGMSLNEGSIMGMDVDMVNKLVSVNVNGVLHGIKHAAKAMIKGGRGGSIICTSSSSGLMGGLGGHAYTL 158
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SDR2A_ARATH (Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.838e-43 Identity = 57/139 (41.01%), Postives = 86/139 (61.87%), Query Frame = -2 Query: 897 LFAENGAYVVIADILDEAGTMLANSIGAR-------YIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTAS---SITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1283 LFA +GA VVIAD+ + AG+ LA S+ + +I CDV+ E+DVE+ + + + G+LDILF+NAG+ G SI D ++ H++ +N+ G +KH A AM++ KG II T+S AG+MGG+ H Y+ Sbjct: 53 LFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYT 191 HSP 2 Score: 95.9005 bits (237), Expect = 3.838e-43 Identity = 51/107 (47.66%), Postives = 74/107 (69.16%), Query Frame = -3 Query: 587 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSL--LRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSA 901 T SK IVGL + AACELG +GIRVNCISP GV T ML++ +R G + ++V+++ SL L+G+ D+A+AA++LASD++ ++ HNLV+DGG T+A Sbjct: 191 TASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIAEAALYLASDESKYVNGHNLVVDGGVTTA 297
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SDR3B_ARATH (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 7.411e-41 Identity = 61/133 (45.86%), Postives = 85/133 (63.91%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIG---ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LF E+GA VVI D+ DE G +A SIG A Y HCDV E++VE+A++ + GKLD+LFSNAG+ SI L++ ++ ++INL G IKHAA AM+ +GSI+CT+S A + G A H Y+ Sbjct: 26 RLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTAAFIKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYT 158 HSP 2 Score: 75.485 bits (184), Expect = 7.411e-41 Identity = 39/103 (37.86%), Postives = 66/103 (64.08%), Query Frame = -3 Query: 593 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 901 T SK G++GL+++A+ LG +GIRVN ++P GV T ++ +G++M P V++ + L+G VA+AA+FLASD++ +++ NL +DGGY+ Sbjct: 158 TTSKHGLLGLIKSASGGLGKYGIRVNGVAPFGVATPLVCNGFKM------EPNVVEQNTSASAN-LKGIVLKARHVAEAALFLASDESAYVSGQNLAVDGGYS 253
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SDR4_ARATH (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 7.517e-39 Identity = 58/133 (43.61%), Postives = 84/133 (63.16%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIG---ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LF ++GA VVI DI +E G LA SIG A + C+V E+DVE+A++ + GKLD+LFSNAG+ S+ LD+E +++N+ G IKHAA +M+ T+GSI+CT+S A +GG H Y+ Sbjct: 64 RLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFGSVLDLDLEAFDRTMAVNVRGAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYT 196 HSP 2 Score: 74.3294 bits (181), Expect = 7.517e-39 Identity = 43/108 (39.81%), Postives = 65/108 (60.19%), Query Frame = -3 Query: 593 TLTLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLL---RGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 907 + T SK ++GL+R+A LG +GIRVN ++P+GV T M S Y EE K++ + G L +G +A+AA+FLASDD+ +I+ NLV+DGG++ Sbjct: 194 SYTASKHALLGLIRSACAGLGQYGIRVNGVAPYGVATGM-TSAYN---------EEAVKMLEEYGEALGNLKGVVLKARHIAEAALFLASDDSVYISGQNLVVDGGFS 291
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SDR3C_ARATH (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 2.056e-37 Identity = 54/133 (40.60%), Postives = 82/133 (61.65%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIG---ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LF ++GA VVI D+ +E G +A IG A + CDV E++VE A++ + GKLD+LFSNAG+ S D+E+ ++++N+ G IKHAA AM+ T+GSI+CT+S + +GG H Y+ Sbjct: 26 RLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDVTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIKHAARAMVEKGTRGSIVCTTSVSAEIGG-GHHGYT 157 HSP 2 Score: 77.411 bits (189), Expect = 2.056e-37 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = -3 Query: 593 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 901 T SK G+VGL+R+A +LG +GIRVN ++P+ V T M E T ++++ +G +L+G VAQ A+FLASDD+ +I+ NL +DGGYT Sbjct: 157 TASKHGLVGLIRSACGDLGKYGIRVNGVAPYAVATPMT-------SHDEVTGKQLEDYFDAKG-ILKGMVLKASHVAQVALFLASDDSAYISGQNLAVDGGYT 251
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SDR5_ARATH (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=3 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 4.506e-37 Identity = 55/133 (41.35%), Postives = 83/133 (62.41%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIG---ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LF ++GA VVI D+ +E G +A SIG A + CD+ E++VE+A++ + GKLD+LFSNAG+ SI LD+E +++N+ G IKHAA +M+ T+GSI+CT+S +GG H Y+ Sbjct: 26 RLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHGSILDLDLEAFDRTMAVNVRGAAAFIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYT 158 HSP 2 Score: 71.2478 bits (173), Expect = 4.506e-37 Identity = 44/108 (40.74%), Postives = 63/108 (58.33%), Query Frame = -3 Query: 593 TLTLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGS---LLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 907 + T SK ++GL+R+A LG +GIRVN ++P+GV T G + EE K+V D S +L+G VA AA+FLASDD+ +I+ NL +DGGY+ Sbjct: 156 SYTASKHALLGLVRSACGGLGKYGIRVNGVAPYGVAT-----------GLTSYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYISGQNLGVDGGYS 252
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SDR3A_ARATH (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.119e-36 Identity = 56/133 (42.11%), Postives = 82/133 (61.65%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIG---ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LF ++GA VVI D +E G +A S+G A + CDV E +VE+A++ + GKLD+LFSNAG+ S L++EQ +++N+ G IKHAA AM+ T+GSI+CT+S A +GG H Y+ Sbjct: 26 RLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPGSFLDLNLEQFDRTMAVNVRGAAAFIKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYT 158 HSP 2 Score: 67.3958 bits (163), Expect = 1.119e-36 Identity = 37/106 (34.91%), Postives = 62/106 (58.49%), Query Frame = -3 Query: 593 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGS---LLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 901 T SK ++GL+++A LG +GIRVN ++P+ V T + + EE ++V + + +L+G VA+AA+FLASDD+ +++ NL +DGGY+ Sbjct: 158 TASKHALLGLVKSACGGLGKYGIRVNGVAPYAVATAI-----------NSRDEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVSGQNLAVDGGYS 252
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: TS2_MAIZE (Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 5.050e-36 Identity = 52/123 (42.28%), Postives = 71/123 (57.72%), Query Frame = -3 Query: 587 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKE--------------TTP--EEVKKL--VGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSA 901 T SK IVGL + AACEL HG+RVNC+SP GV T MLI+ +R T P +EV+K+ V + L+G D+A+A +FLASD+ +I+ HNLV+DGG T++ Sbjct: 208 TASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVRGLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGGVTTS 330 HSP 2 Score: 85.8853 bits (211), Expect = 5.050e-36 Identity = 54/137 (39.42%), Postives = 82/137 (59.85%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIGAR--YIHCDVAKESDVESAIQLAITWK-GKLDILFSNAGIGG----TASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LFA++GA VVIADI D AG LA+++G + ++ CDV+ E DV A+ A++ G+LD+ +NAG+ G A SI S D + ++ +N LG +KHAA + GSI+ +S A ++GGL H Y+ Sbjct: 73 RLFAKHGARVVIADIDDAAGEALASALGPQVSFVRCDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAA-RAMAPRRAGSIVSVASVAAVLGGLGPHAYT 208
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: SILD_FORIN (Secoisolariciresinol dehydrogenase (Fragment) OS=Forsythia intermedia PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 7.657e-36 Identity = 54/133 (40.60%), Postives = 79/133 (59.40%), Query Frame = -2 Query: 900 KLFAENGAYVVIADILDEAGTMLANSIG---ARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIG-GTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPY 1286 KLF+++GA V IAD+ DE G + +IG + YIHCDV E V++A+ ++ GKLDI+FSNAGI I + + + S+N+ G +KHAA M+ + G+II T+S + MGG +SH Y Sbjct: 35 KLFSQHGAKVAIADVQDELGHSVVEAIGTSNSTYIHCDVTNEDGVKNAVDNTVSTYGKLDIMFSNAGISDPNRPRIIDNEKADFERVFSVNVTGVFLCMKHAARVMIPARS-GNIISTASLSSTMGGGSSHAY 166 HSP 2 Score: 84.7297 bits (208), Expect = 7.657e-36 Identity = 45/101 (44.55%), Postives = 65/101 (64.36%), Query Frame = -3 Query: 593 SKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 895 SK ++GL R A ELG GIRVNC+SP G+PT + + F G + EE + ++ G+L +G VEDVA AA++LASD+ +++ HNL IDGG++ Sbjct: 169 SKHAVLGLTRNLAVELGQFGIRVNCLSPFGLPTAL----GKKFSGIKN-EEEFENVINFAGNL-KGPKFNVEDVANAALYLASDEAKYVSGHNLFIDGGFS 263
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Match: TPRL2_ERYCB (Tropinone reductase-like 2 OS=Erythroxylum coca PE=2 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 4.799e-34 Identity = 56/135 (41.48%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIGAR--YIHCDVAKESDVESAIQLAITWKGKLDILFSNAGI---GGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 +LF ENGA VVIADI D+ G LA +G + YIHCDV+KE +V + + + G+LDI+F+NAGI G S+ + + L+S+NL G KHA M++ KG I+ TSS + GL+ H Y+ Sbjct: 31 ELFHENGAKVVIADIQDDLGQALATKLGGKACYIHCDVSKEDEVINLVDTTVAKYGRLDIMFNNAGIIEGQGLPVSVVESEKSDLDRLLSVNLGGAFLGAKHATRVMVQ-QRKGCILFTSSVCTSIAGLSGHAYA 164 HSP 2 Score: 75.0998 bits (183), Expect = 4.799e-34 Identity = 41/102 (40.20%), Postives = 66/102 (64.71%), Query Frame = -3 Query: 593 SKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYT 895 SK+G+ GL + ELG +GIRVNCISP+G L++G G+ E E V+ ++ + G+ L G+ + +A+AA+FLASD+ +++ N+V+DGGY+ Sbjct: 166 SKSGVCGLAKNLTPELGKYGIRVNCISPYG-----LVTGVSNVSGEGEANREFVEAMLSELGT-LSGQTLRADGIAKAALFLASDEAYYVSGINMVVDGGYS 261
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A0D2QED8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G169700 PE=3 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 4.394e-139 Identity = 173/217 (79.72%), Postives = 175/217 (80.65%), Query Frame = -2 Query: 894 MFDFLVYAMEQGVDKHVDLQNSSAKRLVPMATSIASLTNDLFTASCSMNLIYLNSK*IPLFFFFCRMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1544 MF FLVYAMEQGVDKHVDLQNSSAKR MIGKVAVVTGGARGIGAATAKLFAENGAYVVIADILDEAGTMLA+SIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA AMLRCNTKGSIICTSSSAGIMGGLASHPYS+ Sbjct: 1 MFAFLVYAMEQGVDKHVDLQNSSAKR----------------------------------------MIGKVAVVTGGARGIGAATAKLFAENGAYVVIADILDEAGTMLADSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAARAMLRCNTKGSIICTSSSAGIMGGLASHPYSL 177 HSP 2 Score: 229.95 bits (585), Expect = 4.394e-139 Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRG ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNL+IDGGYTSAISSLSFIY Sbjct: 176 SLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGNETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLIIDGGYTSAISSLSFIY 288
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A061E8G3_THECC (Alcohol dehydrogenase OS=Theobroma cacao GN=TCM_011172 PE=3 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 1.182e-109 Identity = 144/209 (68.90%), Postives = 153/209 (73.21%), Query Frame = -2 Query: 894 MEQGVDKHVDLQNSSAKRLVPMATSIASLTNDLFTASCSMNLIYLNSK*IPLFFFFCRMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1520 ME GVDKH +QN SAKRL IGKVAV+TGGARGIGAA AKLFAENGAYVVIADILDE G MLA SIGARYIHCDVAKE DVESAIQLA+TWKG+LDILFSNAGIGG A SITS+DMEQVKHL+SINLLGNVH IKHAA AML+ TKGSIICTSSSAG+MGGLASH YS+ Sbjct: 1 MELGVDKHDHVQNLSAKRL----------------------------------------IGKVAVITGGARGIGAAAAKLFAENGAYVVIADILDELGAMLAESIGARYIHCDVAKEDDVESAIQLALTWKGQLDILFSNAGIGGPAGSITSIDMEQVKHLISINLLGNVHGIKHAARAMLKHRTKGSIICTSSSAGVMGGLASHIYSL 169 HSP 2 Score: 191.43 bits (485), Expect = 1.182e-109 Identity = 87/113 (76.99%), Postives = 103/113 (91.15%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSKA I+GLMRTAACELGVHGIRVNCISPH VP+D+L+S YR+F G ET PE+V KLVG+ GSLLRG+AATVEDVAQAA+FLAS+D GFITAHNLV+DGG+TS+ ++LSFIY Sbjct: 168 SLSKAAIIGLMRTAACELGVHGIRVNCISPHAVPSDLLVSAYRIFLGNETRPEQVSKLVGETGSLLRGRAATVEDVAQAALFLASEDAGFITAHNLVLDGGFTSSCNTLSFIY 280
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: V4U5U0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016207mg PE=3 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 3.914e-91 Identity = 109/152 (71.71%), Postives = 131/152 (86.18%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R++GKVA++TGGARGIGAATAKLFAENGA++VIADILDE G LA++IG RYIHCDV KE DVESA++LA++WKG+LDI+F+NAGI G+ SITSL+ME VK L+S+NL G +H IKHAA AM+ KGSIICTSSSA IMGGLASH YS+ Sbjct: 14 RLMGKVALITGGARGIGAATAKLFAENGAHIVIADILDELGAALADTIGGRYIHCDVTKEEDVESAVRLAVSWKGRLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL 165 HSP 2 Score: 172.17 bits (435), Expect = 3.914e-91 Identity = 78/114 (68.42%), Postives = 98/114 (85.96%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSK I+GL R+ ACELG HGIRVNCISPHGVP++ML++ YR + GK + PEEV K+VG+ GSLLRG++A++EDVAQAA+FLAS++ GFITAHNLVIDGGYT+ SS+SFIY Sbjct: 164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVSKMVGESGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIY 277
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A5BAM4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_025196 PE=3 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 2.601e-90 Identity = 102/152 (67.11%), Postives = 130/152 (85.53%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R++GKVA++TGGARGIGAATAKLFA +GA+V+IAD+LD G LA+SIG RYIHCDVAKE D+ESA+QLA+TWKG+LDI+F+NAGIGG S+T++DM ++K L+++N+ GN+H IKHAA AM+R G IICTSSSA IMGGLASH Y++ Sbjct: 18 RLLGKVAIITGGARGIGAATAKLFARHGAHVIIADVLDHLGFTLADSIGGRYIHCDVAKEDDMESAVQLALTWKGQLDIMFNNAGIGGLDGSVTNIDMTKMKALLAVNVNGNIHGIKHAARAMIRGRKGGCIICTSSSAAIMGGLASHGYTL 169 HSP 2 Score: 179.104 bits (453), Expect = 2.601e-90 Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK IVGLMR+ ACELGVHGIRVNCISPHGVPT+ML+SGYR GK + TPEEV ++VG +GSLLRG+ +VED+AQAA+FLAS+D GFITAHNLV+DGG+TSA S +SFIY Sbjct: 168 TLSKEAIVGLMRSTACELGVHGIRVNCISPHGVPTEMLVSGYRKILGKADVTPEEVSRIVGKRGSLLRGRGGSVEDIAQAALFLASEDAGFITAHNLVLDGGFTSACSDMSFIY 281
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: F6GVL2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00030 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 3.201e-90 Identity = 102/152 (67.11%), Postives = 130/152 (85.53%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R++GKVA++TGGARGIGAATAKLFA +GA+V+IAD+LD G LA+SIG RYIHCDVAKE D+ESA+QLA+TWKG+LDI+F+NAGIGG S+T++DM ++K L+++N+ GN+H IKHAA AM+R G IICTSSSA IMGGLASH Y++ Sbjct: 21 RLLGKVAIITGGARGIGAATAKLFARHGAHVIIADVLDHLGFTLADSIGGRYIHCDVAKEDDMESAVQLALTWKGQLDIMFNNAGIGGLDGSVTNIDMTKMKALLAVNVNGNIHGIKHAARAMIRGRKGGCIICTSSSAAIMGGLASHGYTL 172 HSP 2 Score: 179.104 bits (453), Expect = 3.201e-90 Identity = 84/114 (73.68%), Postives = 99/114 (86.84%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK IVGLMR+ ACELGVHGIRVNCISPHGVPT+ML+SGYR GK + TPEEV ++VG +GSLLRG+ +VED+AQAA+FLAS+D GFITAHNLV+DGG+TSA S +SFIY Sbjct: 171 TLSKEAIVGLMRSTACELGVHGIRVNCISPHGVPTEMLVSGYRKILGKADVTPEEVSRIVGKRGSLLRGRGGSVEDIAQAALFLASEDAGFITAHNLVLDGGFTSACSDMSFIY 284
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A067F604_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023708mg PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 6.877e-90 Identity = 110/152 (72.37%), Postives = 130/152 (85.53%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R+ GKVAV+TGGARGIGAATAKLFAENGA++VIADILDE G LA++IG RYIHCDV KE DVESA++LA++WKG+LDI+F+NAGI G+ SITSL+ME VK L+S+NL G +H IKHAA AM+ KGSIICTSSSA IMGGLASH YS+ Sbjct: 14 RLTGKVAVITGGARGIGAATAKLFAENGAHIVIADILDELGAALASTIGGRYIHCDVTKEEDVESAVRLAVSWKGQLDIMFNNAGISGSGGSITSLNMEDVKFLLSVNLNGILHGIKHAAKAMIEGQRKGSIICTSSSAAIMGGLASHAYSL 165 HSP 2 Score: 169.859 bits (429), Expect = 6.877e-90 Identity = 78/114 (68.42%), Postives = 97/114 (85.09%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSK I+GL R+ ACELG HGIRVNCISPHGVP++ML++ YR + GK + PEEV K+V D GSLLRG++A++EDVAQAA+FLAS++ GFITAHNLVIDGGYT+ SS+SFIY Sbjct: 164 SLSKEAIIGLARSTACELGKHGIRVNCISPHGVPSEMLVNAYRKYLGKADMKPEEVCKMVRDSGSLLRGRSASIEDVAQAALFLASEEAGFITAHNLVIDGGYTTGTSSMSFIY 277
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: A0A067KQ21_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04845 PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 4.305e-88 Identity = 87/130 (66.92%), Postives = 105/130 (80.77%), Query Frame = -2 Query: 897 KLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1286 K FAENGA VVIADILDE G LA+SIG +YIHC+V E+DVE+AI LA+ WKGK+DI+F+NAGI G SIT+LDM+QVK+L S+N+ G H IKHAA AM++ T+G IICTSSSA IMGGL SHPY+ Sbjct: 39 KTFAENGASVVIADILDELGGSLADSIGGKYIHCNVVNEADVEAAINLALAWKGKIDIMFNNAGIAGPGGSITNLDMQQVKNLFSVNVGGIFHGIKHAAAAMIKARTEGCIICTSSSAAIMGGLGSHPYT 168 HSP 2 Score: 172.555 bits (436), Expect = 4.305e-88 Identity = 82/114 (71.93%), Postives = 99/114 (86.84%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGKE-TTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 T SK I+GLM+++ACELGV+GIRVNCISPHGVP+DML++ YR GKE PEEV K+VG+ GSLLRGK A+VEDVAQAA+FLAS+++ FITAHNLVIDGGYTSA S++SFIY Sbjct: 168 TSSKEAILGLMKSSACELGVYGIRVNCISPHGVPSDMLVNAYRRILGKEDMQPEEVSKIVGESGSLLRGKCASVEDVAQAALFLASEESRFITAHNLVIDGGYTSANSNMSFIY 281
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: B9S7B8_RICCO (Short chain alcohol dehydrogenase, putative OS=Ricinus communis GN=RCOM_0775930 PE=3 SV=1) HSP 1 Score: 184.882 bits (468), Expect = 4.488e-88 Identity = 108/151 (71.52%), Postives = 125/151 (82.78%), Query Frame = -2 Query: 897 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYS 1349 R+ GKVAVVTGGARGIGAATAK FAENGA VV+ADILD+ G LA+SIG RYIHCDVA E+DVESAI LA+ WKGKLDI+F+NAGI G SIT+LDMEQVK+L S+N+ G +H IKHAA AM++ G IIC+SSSA IMGGL SHPY+ Sbjct: 18 RLRGKVAVVTGGARGIGAATAKRFAENGANVVVADILDDLGHPLADSIGGRYIHCDVANEADVESAINLALAWKGKLDIMFNNAGIAGPDGSITNLDMEQVKYLFSVNVNGTLHGIKHAAKAMIKGQNGGCIICSSSSAAIMGGLGSHPYT 168 HSP 2 Score: 169.859 bits (429), Expect = 4.488e-88 Identity = 80/114 (70.18%), Postives = 98/114 (85.96%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 T SK IVGLM++ ACELGVHGIRVNCISPHGVP++ML+ YR GK + EEV K+VG++GSLLRG+ ATVEDVAQAA+FLAS+++GFITAHNLVIDGGYTSA ++++FIY Sbjct: 168 TSSKEAIVGLMKSTACELGVHGIRVNCISPHGVPSEMLVGAYRRILGKADMNSEEVSKIVGERGSLLRGRCATVEDVAQAALFLASEESGFITAHNLVIDGGYTSANNNMNFIY 281
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: B9HJM3_POPTR (Alcohol dehydrogenase family protein OS=Populus trichocarpa GN=POPTR_0008s14120g PE=3 SV=2) HSP 1 Score: 184.882 bits (468), Expect = 9.628e-87 Identity = 89/131 (67.94%), Postives = 106/131 (80.92%), Query Frame = -2 Query: 894 KLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGGTASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1286 K+FAENGA V+IADILD+ GT LA+SIG RYIHCDV E+DVESAI LA+ WKGKLDI+F+NAGI GT SIT+LDMEQV +L+S+N+ G +H IKHAA M++ G IIC SSSA IMGGL SHPYS+ Sbjct: 20 KVFAENGASVIIADILDDLGTSLADSIGGRYIHCDVVNEADVESAINLALAWKGKLDIMFNNAGISGTEGSITNLDMEQVNYLLSVNVNGILHGIKHAARVMIKGQKGGCIICMSSSAAIMGGLGSHPYSL 150 HSP 2 Score: 165.622 bits (418), Expect = 9.628e-87 Identity = 76/114 (66.67%), Postives = 98/114 (85.96%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 +LSK I+GLMR+ ACELGVHGIRVNCISPHGV ++ML+ YR GK + TPEEV K+VG++GSLL+G++ ++EDVAQA +FLAS++ G+ITAHNLVIDGG+TSA S++SFIY Sbjct: 149 SLSKEAIIGLMRSTACELGVHGIRVNCISPHGVASEMLVGAYRKVLGKKDMTPEEVSKIVGERGSLLKGRSPSLEDVAQAVMFLASEEAGYITAHNLVIDGGFTSASSNMSFIY 262
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Match: W9SHG0_9ROSA (Momilactone A synthase OS=Morus notabilis GN=L484_015124 PE=3 SV=1) HSP 1 Score: 185.652 bits (470), Expect = 7.802e-86 Identity = 105/153 (68.63%), Postives = 133/153 (86.93%), Query Frame = -2 Query: 894 RMIGKXXXXXXXXXXXXXXXAKLFAENGAYVVIADILDEAGTMLANSIGARYIHCDVAKESDVESAIQLAITWKGKLDILFSNAGIGG-TASSITSLDMEQVKHLVSINLLGNVHAIKHAA*AMLRCNTKGSIICTSSSAGIMGGLASHPYSV 1349 R+ GK+AV+TGGARGIGAATAK+FA+NGA+V+IADILD+ G LA+SIG RYIHCDV KESDVESA++LA+ WKG+LDI+F+NAGI G T SITSLDM++VK+L+S+N+LG +H K+A+ AM++ KGSIICTSSSAGIMGGL SH Y++ Sbjct: 20 RLAGKIAVITGGARGIGAATAKVFAQNGAHVIIADILDDLGATLADSIGGRYIHCDVTKESDVESAVELALKWKGQLDIMFNNAGISGPTGGSITSLDMDKVKNLLSVNVLGILHGTKYASRAMIKGKNKGSIICTSSSAGIMGGLGSHGYTL 172 HSP 2 Score: 161.77 bits (408), Expect = 7.802e-86 Identity = 77/114 (67.54%), Postives = 94/114 (82.46%), Query Frame = -3 Query: 563 TLSKAGIVGLMRTAACELGVHGIRVNCISPHGVPTDMLISGYRMFRGK-ETTPEEVKKLVGDQGSLLRGKAATVEDVAQAAVFLASDDTGFITAHNLVIDGGYTSAISSLSFIY 901 TLSK I GL+R+ ACELGVHGIRVN ISPHGVPT+ML+ +R F GK + EEV K+VG++GSLLRG+ T +DVA AA+FLASDD+ F+TAHNLV+DGGYTSA S++SFIY Sbjct: 171 TLSKEAINGLVRSVACELGVHGIRVNSISPHGVPTEMLVGAFRKFVGKVDIKAEEVGKIVGERGSLLRGRGGTADDVAMAALFLASDDSAFVTAHNLVVDGGYTSADSNMSFIY 284 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0097313 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097313 ID=g.barbadense_cottongen_reftransV1_0097313; Name=g.barbadense_cottongen_reftransV1_0097313; organism=Gossypium barbadense; type=contig; length=1977bpback to top |