g.barbadense_cottongen_reftransV1_0097169, g.barbadense_cottongen_reftransV1_0097169 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BEH4_ARATH (BES1/BZR1 homolog protein 4 OS=Arabidopsis thaliana GN=BEH4 PE=1 SV=1) HSP 1 Score: 259.61 bits (662), Expect = 2.019e-78 Identity = 179/264 (67.80%), Postives = 201/264 (76.14%), Query Frame = -1 Query: 3 FLQGC-KPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXS--KRP-YSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEE----VLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVIS-DEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GC +PVERM+I GGSAT SPCSSY PSP ASYNPSP SS+F SPASSS+ +GD SL PWLK+LS+ SSS++SS + P Y YI GGSISAPVTPPLSSPTARTPRM DW+ + +SF SSTPPSP RQI+PD EWFSG+Q S P SPTFSLVS NPFGFKEE GGGSRMWTPGQSGTCSPAI G+D TADVPMSE ++ EFAFGSN GLVK WEGERIHE+ GSDDLELTLG+S T Sbjct: 70 YRKGCSRPVERMEIGGGSATASPCSSYQPSPCASYNPSPGSSNFMSPASSSFANLTSGDGQSLIPWLKHLSTTSSSSASSSSRLPNYLYIPGGSISAPVTPPLSSPTARTPRMNTDWQQLN---------NSFFVSSTPPSPTRQIIPDSEWFSGIQLAQSVPASPTFSLVSQNPFGFKEEAASAAGGGGGSRMWTPGQSGTCSPAIPPGADQTADVPMSEAVAPPEFAFGSNTNGLVKAWEGERIHEESGSDDLELTLGNSST 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BZR2_ORYSJ (Protein BZR1 homolog 2 OS=Oryza sativa subsp. japonica GN=BZR2 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 1.807e-62 Identity = 159/268 (59.33%), Postives = 193/268 (72.01%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNG-----DVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFG-FKEEVLAGGG-SRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSN------ATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +G KP ERM+++G S + SPCSSY PSPRASYN SP SSSFPS ASS ++ +PN D N + PWLK LS++ SS + P IHGGSISAPVTPPLSSPTARTPRMK DW++ +V P W+ + +STPPSPGR ++PDP W +G+Q + P+SPTFSLVSSNPF FK+ +L G SRM TPGQSGTCSPAI + H D+ M + +SDEFAFGS+ A GLV+ WEGERIHED GSDDLELTLGSS+T Sbjct: 95 YRKGYKPPERMEVIGCSVSPSPCSSYQPSPRASYNASPTSSSFPSGASSPFLPHPNNMANGVDGNPILPWLKTLSNSPSSKKHPQLPPLLIHGGSISAPVTPPLSSPTARTPRMKTDWDESNVQPTWTGSNSPCVVNSTPPSPGRTMLPDPAWLAGIQISSTSPSSPTFSLVSSNPFSVFKDAILVGNNSSRMCTPGQSGTCSPAIPGMAPH-PDIHMMDAVSDEFAFGSSTNGGHQAAGLVRAWEGERIHEDSGSDDLELTLGSSRT 361
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BZR3_ORYSJ (Protein BZR1 homolog 3 OS=Oryza sativa subsp. japonica GN=BZR3 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.099e-61 Identity = 156/272 (57.35%), Postives = 190/272 (69.85%), Query Frame = -1 Query: 3 FLQGCKP--VERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDV------NSLFPWLKNLXXXXXXXXXSKRP---YSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNAT------GLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP ER D +G SA+ SPCSSY PSPRASYNPSPASSSFPS SSS++ + +SL PWLK L +SS ASSSK P + Y +GGSISAPVTPP SSPT RTPR++ DWE+ SV P W++ ++ LP+STPPSPG +I PDP W SG Q + P+SPT++LVS NPFG +E +A SR+ TPGQSGTCSP + H DV M + D+FAFGS++ GLVK WEGERIHE+C SD+LELTLGSSKT Sbjct: 82 YRKGCKPPQAERPDPIGRSASPSPCSSYQPSPRASYNPSPASSSFPSSGSSSHITIGGNSLIGGVEGSSLIPWLKTLPLSSSYASSSKFPQLHHLYFNGGSISAPVTPPSSSPT-RTPRLRTDWENASVQPPWASANYTSLPNSTPPSPGHKIAPDPAWLSGFQISSAGPSSPTYNLVSPNPFGIFKEAIA-STSRVCTPGQSGTCSPVMGGMPAH-HDVQMVDGAPDDFAFGSSSNGNNESPGLVKAWEGERIHEECASDELELTLGSSKT 350
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BEH3_ARATH (BES1/BZR1 homolog protein 3 OS=Arabidopsis thaliana GN=BEH3 PE=1 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 2.413e-55 Identity = 130/259 (50.19%), Postives = 156/259 (60.23%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGG-GSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSN---ATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP++RMD++ GS + SPCSSY ++P + + PS +S NP GD NSL PWLKNL SS S SK P + HG SISAPVTPPL AR+P DQ +PD W SG+QTP S P+SPTFSLVS NPF KE G S MWTPGQSG CSPAI AG D +DVPM++ ++ EFAFG N A G+VKPWEGERIH +C SDDLELTLG+S+T Sbjct: 70 YRKGCKPMDRMDLMNGSTSASPCSSYQ------HSPRASYNPSPSSSSFPSPTNPFGDANSLIPWLKNL----SSNSPSKLP--FFHGNSISAPVTPPL----ARSPT-----RDQVT------------------------IPDSGWLSGMQTPQSGPSSPTFSLVSRNPFFDKEAFKMGDCNSPMWTPGQSGNCSPAIPAGVDQNSDVPMADGMTAEFAFGCNAMAANGMVKPWEGERIHGECVSDDLELTLGNSRT 283
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Match: BZR4_ORYSJ (Protein BZR1 homolog 4 OS=Oryza sativa subsp. japonica GN=BZR4 PE=3 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.715e-33 Identity = 128/289 (44.29%), Postives = 152/289 (52.60%), Query Frame = -1 Query: 3 FLQGCKP--VERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXS---KRP--YSYIHGGSISAPVTPPLSSPTARTPRMKND-WEDQ------SVLPGWSA-------QQHSFLPSSTPPSPGRQIVPDPE----------WFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNA---TGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP E D +G S + SPCSSY PSPR + + + SS G+ +SL PWLK LSSA K P YSY GGSISAPVTPP SP RTPR+K WE+ SVLP W+ S LP+STPPSP R++ W +G Q + P+SPT+SLV+ P F A G S SG CSP +A G DV M++ EFAFG TGLVK WEGERIHE+CGSDDLELTLGSS T Sbjct: 73 YRKGCKPPASELADQLGRSPSASPCSSYQPSPRGTSSFPSSGSSSQIT----LGGGGGGEGSSLIPWLKTLSSAGVGIGGGSSSKFPAHYSYFGGGSISAPVTPPSGSP-PRTPRLKTAAWEEYHHHHAGSVLPPWATVGASYAYAASSSLPNSTPPSPRRKVAAAAAAAGGGNDAAAWLAGFQISSAGPSSPTYSLVAPPPNPFGAAAAAAGSSSRV---MSGACSP-VAGG-----DVQMADAARREFAFGGEGGKMTGLVKAWEGERIHEECGSDDLELTLGSSMT 347
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A0B0NRF7_GOSAR (BES1/BZR1 4-like protein OS=Gossypium arboreum GN=F383_19508 PE=4 SV=1) HSP 1 Score: 429.483 bits (1103), Expect = 6.679e-142 Identity = 249/255 (97.65%), Postives = 252/255 (98.82%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKPVERMDIVGGSATVSPCSSYHPSPRASYNPSPASSSFPSPASSSYVVNPNGDVNSLFPWLKNLSSASSSASSSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAG D TADVPMSEVISDEFAFGSNATGLVKPWEGERIHE+CGSDDLELTLGSSKT Sbjct: 70 YRKGCKPVERMDIVGGSATVSPCSSYHPSPRASYNPSPASSSFPSPASSSYVVNPNGDVNSLFPWLKNLSSASSSASSSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGLDQTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEECGSDDLELTLGSSKT 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A0D2NIJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G052400 PE=4 SV=1) HSP 1 Score: 428.713 bits (1101), Expect = 1.333e-141 Identity = 247/255 (96.86%), Postives = 250/255 (98.04%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + GCKPVERMDIVGGSATVSPCSSYHPS RASYNPSPASSSFPSPASSSY+VNPNGDVNSLFPWLKNLSSASSSASSSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAG D TADVPMSEVISDEFAFGSNATGLVKPWEGERIHE+CGSDDLELTLGSSKT Sbjct: 70 YRNGCKPVERMDIVGGSATVSPCSSYHPSSRASYNPSPASSSFPSPASSSYMVNPNGDVNSLFPWLKNLSSASSSASSSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGLDQTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEECGSDDLELTLGSSKT 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A061F8K9_THECC (BES1/BZR1 OS=Theobroma cacao GN=TCM_031955 PE=4 SV=1) HSP 1 Score: 399.823 bits (1026), Expect = 2.558e-130 Identity = 231/255 (90.59%), Postives = 242/255 (94.90%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKPVERMDIVGGSAT+SPCSSYHPSP ASYNPSP SSSFPSPASSSYVVNPNGD NSL PWLKNLSSASSSASSSK P+ YIHGGSISAPVTPPLSSPTARTPR+K DWE+QS PGWSAQQHS LPSSTPPSPGRQIVPDPEWF+GL+ PHS PTSPTFSLVS+NPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHE+CGSDDLELTLGSS+T Sbjct: 70 YRKGCKPVERMDIVGGSATMSPCSSYHPSPCASYNPSPVSSSFPSPASSSYVVNPNGDGNSLIPWLKNLSSASSSASSSKLPHLYIHGGSISAPVTPPLSSPTARTPRIKTDWEEQSARPGWSAQQHSLLPSSTPPSPGRQIVPDPEWFAGLRIPHSGPTSPTFSLVSTNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEECGSDDLELTLGSSRT 324
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: V4VRE3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021151mg PE=4 SV=1) HSP 1 Score: 376.711 bits (966), Expect = 5.072e-122 Identity = 220/255 (86.27%), Postives = 232/255 (90.98%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 FLQGCKPVERMDIVGGSA SPCSSYHPSP ASYNPSP SSSFPSPASSSY NPN D NSL PWLKNLSSASSSASSSK P+ YIH GSISAPVTPPLSSPTARTPRMK+DWEDQS PG Q +SFLPSSTPPSPGRQIVPDPEWF+G++ PH PTSPTFSLV+SNPFGFK+E LAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEV++DEFAFGSNATGLVK WEGERIHE+CGSDDLELTLGSS+T Sbjct: 24 FLQGCKPVERMDIVGGSAVASPCSSYHPSPCASYNPSPTSSSFPSPASSSYAANPNSD-NSLIPWLKNLSSASSSASSSKLPHLYIHTGSISAPVTPPLSSPTARTPRMKSDWEDQSSRPGLGGQHYSFLPSSTPPSPGRQIVPDPEWFAGIRLPHGAPTSPTFSLVASNPFGFKDETLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVVTDEFAFGSNATGLVKAWEGERIHEECGSDDLELTLGSSRT 277
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A067DLE1_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g020567mg PE=4 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 2.958e-119 Identity = 218/255 (85.49%), Postives = 232/255 (90.98%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKPVERMDIVGGSA SPCSSYHPSP ASYNPSPASSSFPSPASSSY NPN D NSL PWLKNLSSASSSASSSK P+ YIH GSISAPVTPPLSSPTARTPRMK+DWEDQS PG Q +SFLPSSTPPSPGRQIVPDPEWF+G++ PH PTSPTFSLV+SNPFGFK+E LAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEV++DEFAFGSNATGLVK WEGERIHE+CGSDDLELTLGSS+T Sbjct: 70 YRKGCKPVERMDIVGGSAVASPCSSYHPSPCASYNPSPASSSFPSPASSSYAANPNAD-NSLIPWLKNLSSASSSASSSKLPHLYIHTGSISAPVTPPLSSPTARTPRMKSDWEDQSSRPGLGGQHYSFLPSSTPPSPGRQIVPDPEWFAGIRLPHGAPTSPTFSLVASNPFGFKDETLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVVTDEFAFGSNATGLVKAWEGERIHEECGSDDLELTLGSSRT 323
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: V4TV52_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021151mg PE=4 SV=1) HSP 1 Score: 370.933 bits (951), Expect = 3.994e-119 Identity = 217/255 (85.10%), Postives = 231/255 (90.59%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKPVERMDIVGGSA SPCSSYHPSP ASYNPSP SSSFPSPASSSY NPN D NSL PWLKNLSSASSSASSSK P+ YIH GSISAPVTPPLSSPTARTPRMK+DWEDQS PG Q +SFLPSSTPPSPGRQIVPDPEWF+G++ PH PTSPTFSLV+SNPFGFK+E LAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEV++DEFAFGSNATGLVK WEGERIHE+CGSDDLELTLGSS+T Sbjct: 70 YRKGCKPVERMDIVGGSAVASPCSSYHPSPCASYNPSPTSSSFPSPASSSYAANPNSD-NSLIPWLKNLSSASSSASSSKLPHLYIHTGSISAPVTPPLSSPTARTPRMKSDWEDQSSRPGLGGQHYSFLPSSTPPSPGRQIVPDPEWFAGIRLPHGAPTSPTFSLVASNPFGFKDETLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVVTDEFAFGSNATGLVKAWEGERIHEECGSDDLELTLGSSRT 323
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: M5WG65_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008637mg PE=4 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 2.980e-117 Identity = 211/255 (82.75%), Postives = 223/255 (87.45%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP ERMD+VGGS SPCSSYHPS ASYNPSP SSSFPSPASSSY N N D SL PWLKNLSS SSSASSSK P YIHGGSISAPVTPPLSSPTARTPRMK DW+DQS PGW QQ+SFLPSSTPPSPGRQIVPDPEWF+GL+ PH PTSPTFSLV+ NPFGFK+E LAGGGSRMWTPGQSGTCSPAIAAGSDHTAD+PMSEVISDEFAFG N GLVKPWEGERIHE+CGSDDLELTLGSS+T Sbjct: 70 YRKGCKPAERMDVVGGSTLASPCSSYHPSTCASYNPSPGSSSFPSPASSSYAANQNADGRSLIPWLKNLSSGSSSASSSKLPNLYIHGGSISAPVTPPLSSPTARTPRMKTDWDDQSARPGWGGQQYSFLPSSTPPSPGRQIVPDPEWFAGLRIPHG-PTSPTFSLVALNPFGFKDEALAGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMSEVISDEFAFGCNTAGLVKPWEGERIHEECGSDDLELTLGSSRT 323
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A0D2SUL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G327000 PE=4 SV=1) HSP 1 Score: 365.925 bits (938), Expect = 3.113e-117 Identity = 214/255 (83.92%), Postives = 225/255 (88.24%), Query Frame = -1 Query: 3 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 767 + +GCKP+ERMDIVGGSAT S P +SY+PSP SSSFPS ASSSYVVN NGD +SL PWLKNLSSASSS SSK P+ YIH GSISAPVTPPLSSPTARTPR DWED + PGWSAQQHSFLPSSTPPSPGRQIVPDPEWF+GL+ P S PTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSS+T Sbjct: 70 YRKGCKPLERMDIVGGSATAS--------PSSSYHPSPMSSSFPSSASSSYVVNSNGDGSSLIPWLKNLSSASSSPMSSKLPHIYIHSGSISAPVTPPLSSPTARTPRTNTDWEDLTARPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFAGLRIPLSGPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSRT 316
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: A0A0B0P483_GOSAR (BES1/BZR1 4-like protein OS=Gossypium arboreum GN=F383_06807 PE=4 SV=1) HSP 1 Score: 360.147 bits (923), Expect = 5.405e-115 Identity = 212/254 (83.46%), Postives = 224/254 (88.19%), Query Frame = -1 Query: 6 FLQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSK 767 + + CKP+ERMDIVGGSAT S P +SY+PSP SSSFPSPASSSYVVN NGD +SL PWLKNLSSASSS SSK P+ YIH GSISAPVTPPLSSPTARTPR DWED + PGWSAQQHSFLPSSTPPSPGRQIVPDPEWF+GL+ P S PTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGL+KPWEGERIHEDCGSDDLELTLGSS+ Sbjct: 70 YRKDCKPLERMDIVGGSATAS--------PSSSYHPSPMSSSFPSPASSSYVVNSNGDGSSLIPWLKNLSSASSSPMSSKLPHIYIHSGSISAPVTPPLSSPTARTPRTNTDWEDLTARPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFAGLRIPLSGPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLMKPWEGERIHEDCGSDDLELTLGSSR 315
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Match: W9QTN8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017551 PE=4 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 8.337e-112 Identity = 207/254 (81.50%), Postives = 228/254 (89.76%), Query Frame = -1 Query: 3 LQGCKPVERMDIVGGSATVSPCSSYHXXXXXXXXXXXXXXXXXXXXXXSYVVNPNGDVNSLFPWLKNLXXXXXXXXXSKRPYSYIHGGSISAPVTPPLSSPTARTPRMKNDWEDQSVLPGWSAQQHSFLPSSTPPSPGRQIVPDPEWFSGLQTPHSRPTSPTFSLVSSNPFGFKEEVLAGGGSRMWTPGQSGTCSPAIAAGSDHTADVPMSEVISDEFAFGSNATGLVKPWEGERIHEDCGSDDLELTLGSSKT 764 +QGCKP E M++ GGSA SPCSSYHPSP ASYNPSP SSSFPSPASSSYV NPNGD +SL PWLKNLSSASSSASSSK P+ YIH GSISAPVTPPLSSPTARTPR+K DW++ S P W Q SFLPSSTPPSPGRQ+V DPEWF+G++ P + PTSPTFSLVS+NPFGFK+EV+AGGGSRMWTPGQSGTCSPAIAAGSDHTAD+PM+EVISDEFAFGS+ATGLVKPWEGERIHE+CGSDDLELTLGSS+T Sbjct: 138 IQGCKPAECMEVAGGSAAASPCSSYHPSPCASYNPSPGSSSFPSPASSSYVANPNGDGSSLIPWLKNLSSASSSASSSKLPHLYIHSGSISAPVTPPLSSPTARTPRIKTDWDENSTRPLWGGQHCSFLPSSTPPSPGRQVV-DPEWFAGIRLPQTGPTSPTFSLVSANPFGFKDEVMAGGGSRMWTPGQSGTCSPAIAAGSDHTADIPMAEVISDEFAFGSHATGLVKPWEGERIHEECGSDDLELTLGSSRT 390 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 5
BLAST of g.barbadense_cottongen_reftransV1_0097169 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0097169 ID=g.barbadense_cottongen_reftransV1_0097169; Name=g.barbadense_cottongen_reftransV1_0097169; organism=Gossypium barbadense; type=contig; length=2033bpback to top |