g.barbadense_cottongen_reftransV1_0096985, g.barbadense_cottongen_reftransV1_0096985 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_BOVIN (tRNA-specific adenosine deaminase 2 OS=Bos taurus GN=DEADC1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.467e-28 Identity = 70/146 (47.95%), Postives = 95/146 (65.07%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 C+++ + E++ GRN +T+NATR+AEM AID L+ +R G S +EV F +LYVT EPCIMCAAAL + I V YGC NE+FGGCGS+L + S+ +P G F+CT G A EA+ + ++FY+Q NPNAPK Sbjct: 46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQALDWCRRRGRSPSEV---FEHTVLYVTVEPCIMCAAALRLMRIPLVVYGCQNERFGGCGSVLDIASA--------DLPSTGKPFQCTPGYRAEEAVEMLKTFYKQENPNAPK 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_DANRE (tRNA-specific adenosine deaminase 2 OS=Danio rerio GN=adat2 PE=2 SV=2) HSP 1 Score: 115.161 bits (287), Expect = 2.797e-27 Identity = 72/151 (47.68%), Postives = 96/151 (63.58%), Query Frame = 3 Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559 + C+++ + E+I GRN ET+NATR+AEM A+D +L+ W R L + + + Q +LYVT EPCIMCAAAL L I V YGC NE+FGGCGS+L + SD +P G FKC G A EA+ + ++FY+Q NPNAPKP Sbjct: 41 VPVGCLMVYNNEIIGKGRNEVNETKNATRHAEMVALDQVLD-WCR--LREKDCKEVCEQTVLYVTVEPCIMCAAALRLLRIPFVVYGCKNERFGGCGSVLDVS--------SDHLPHTGTSFKCIAGYRAEEAVEMLKTFYKQENPNAPKP 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_HUMAN (tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 3.049e-27 Identity = 68/146 (46.58%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 C+++ + E++ GRN +T+NATR+AEM AID +L+ ++ G S +EV F +LYVT EPCIMCAAAL + I V YGC NE+FGGCGS+L++ S+ +P R F+C G A EA+ + ++FY+Q NPNAPK Sbjct: 46 CLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKSPSEV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVEMLKTFYKQENPNAPK 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_MOUSE (tRNA-specific adenosine deaminase 2 OS=Mus musculus GN=Adat2 PE=2 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 8.353e-27 Identity = 68/150 (45.33%), Postives = 95/150 (63.33%), Query Frame = 3 Query: 1113 LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ--RGFKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 + C+++ + E++ GRN +T+NATR+AEM AID +L+ + G S + V F +LYVT EPCIMCAAAL + I V YGC NE+FGGCGS+L++ S+ +P R F+C G A EA+ L ++FY+Q NPNAPK Sbjct: 42 VPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCHQHGQSPSTV---FEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFGGCGSVLNIASA--------DLPNTGRPFQCIPGYRAEEAVELLKTFYKQENPNAPK 180
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENTR (tRNA-specific adenosine deaminase 2 OS=Xenopus tropicalis GN=adat2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.409e-25 Identity = 70/155 (45.16%), Postives = 96/155 (61.94%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583 C+++ D +++ GRN ET+NATR+AEM AID +L+ +++ +V F +LYVT EPCIMCA AL L I V YGC NE+FGGCGS+L++ D +P G FK GG A +A+ L ++FY+Q NPNAP R V+KK Sbjct: 29 CLMVYDNQVVGKGRNEVNETKNATRHAEMVAIDQVLDWCEKNSKKSRDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNV--------AGDNIPDTGTEFKYIGGYQAEKAVELLKTFYKQENPNAP---RSKVRKK 169
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: ADAT2_XENLA (tRNA-specific adenosine deaminase 2 OS=Xenopus laevis GN=adat2 PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 2.485e-25 Identity = 67/146 (45.89%), Postives = 91/146 (62.33%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRG--FKCTGGLMASEAISLFRSFYEQGNPNAPK 1556 C+++ +++ GRN ET+NAT++AEM AID +L+ + + +V F +LYVT EPCIMCA AL L I V YGC NE+FGGCGS+L++ D +P G FKC GG A +AI L ++FY+Q NPNAPK Sbjct: 34 CLMVYGNQVVGKGRNEVNETKNATQHAEMVAIDQVLDWCEMNSKKSTDV---FENIVLYVTVEPCIMCAGALRLLKIPLVVYGCRNERFGGCGSVLNVS--------GDDIPDTGTKFKCIGGYQAEKAIELLKTFYKQENPNAPK 168
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_SCHPO (tRNA-specific adenosine deaminase subunit tad2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tad2 PE=3 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 3.473e-20 Identity = 61/147 (41.50%), Postives = 81/147 (55.10%), Query Frame = 3 Query: 1122 SCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPH 1562 SCV + GE+I G N T + + R+AE+ AI+ +LE + A F + LYVT EPC+MCAAAL L IK VY+GC N++FGGCGS+ S++ D+ + GL SEA+ L R FY Q N AP P Sbjct: 240 SCVFVYKGEVIGRGFNETNCSLSGIRHAELIAIEKILEHYP---------ASVFKETTLYVTVEPCLMCAAALKQLHIKAVYFGCGNDRFGGCGSVFSIN--------KDQSIDPSYPVYPGLFYSEAVMLMREFYVQENVKAPVPQ 369
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TAD2_YEAST (tRNA-specific adenosine deaminase subunit TAD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TAD2 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 6.845e-18 Identity = 55/140 (39.29%), Postives = 76/140 (54.29%), Query Frame = 3 Query: 1143 GELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSL-HSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKP 1559 G+++A G N T ++ +AE ID + M G V F LYVT EPCIMCA+AL L I V +GC NE+FGG G++LS+ H +C+ + G++ G++ EAI L R FY + N APKP Sbjct: 35 GQVMAYGMNDTNKSLTGVAHAEFMGIDQIKAMLGSRG-----VVDVFKDITLYVTVEPCIMCASALKQLDIGKVVFGCGNERFGGNGTVLSVNHDTCT--LVPKNNSAAGYESIPGILRKEAIMLLRYFYVRQNERAPKP 167
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRP1 (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M1 GN=tadA PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.689e-10 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538 CVI+KDGE+I G N E+ A +AEM AI+ + E L+VT EPC+MC+ A+ I V YG +N+KFGG S+ + ++D+ + GL+A++ ++ ++F+ QG Sbjct: 32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGVDSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Match: TADA_STRPQ (tRNA-specific adenosine deaminase OS=Streptococcus pyogenes serotype M3 (strain SSI-1) GN=tadA PE=3 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 1.735e-10 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQG 1538 CVI+KDGE+I G N E+ A +AEM AI+ + E L+VT EPC+MC+ A+ I V YG +N+KFGG S+ + ++D+ + GL+A++ ++ ++F+ QG Sbjct: 32 CVIVKDGEIIGRGHNAREESNQAIMHAEMMAINEA---------NAHEGNWRLLDTTLFVTIEPCVMCSGAIGLARIPHVIYGASNQKFGGADSLYQI--------LTDERLNHRVQVERGLLAADCANIMQTFFRQG 152
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0D2V4B3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G114300 PE=4 SV=1) HSP 1 Score: 285.419 bits (729), Expect = 5.577e-88 Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589 CVIIKDGE+IA GRNRTTETRNATR+AEMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIK+VYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE Sbjct: 29 CVIIKDGEVIASGRNRTTETRNATRHAEMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKEVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 183
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0D2V5A2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G114300 PE=4 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 9.300e-81 Identity = 126/127 (99.21%), Postives = 127/127 (100.00%), Query Frame = 3 Query: 1209 MEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589 MEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIK+VYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE Sbjct: 1 MEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKEVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 127
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A061GQA4_THECC (Cytidine/deoxycytidylate deaminase family protein isoform 4 (Fragment) OS=Theobroma cacao GN=TCM_039450 PE=4 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 5.068e-68 Identity = 132/180 (73.33%), Postives = 146/180 (81.11%), Query Frame = 3 Query: 1071 EQNFNAIFFFSPYL------LSTSCVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQR-GFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589 +Q N F L + CV IKDG++IA GRNRT ETRNATR+AEMEAID LLE WQRDGLSK++VA+ FS+CILYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLHSS +VPQR GFKCTGGL+ASEA+SLFRSFYEQGNPNAPKPHRPLVQK+VE Sbjct: 34 QQTHNIFLIFQAKLALESLEVPVGCVFIKDGKVIASGRNRTNETRNATRHAEMEAIDILLEKWQRDGLSKSDVAETFSKCILYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHSSALSHL--SEVPQRKGFKCTGGLLASEAVSLFRSFYEQGNPNAPKPHRPLVQKEVE 211
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A061GS83_THECC (Cytidine/deoxycytidylate deaminase family protein isoform 1 OS=Theobroma cacao GN=TCM_039450 PE=4 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.703e-67 Identity = 128/156 (82.05%), Postives = 140/156 (89.74%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQR-GFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589 CV IKDG++IA GRNRT ETRNATR+AEMEAID LLE WQRDGLSK++VA+ FS+CILYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLHSS +VPQR GFKCTGGL+ASEA+SLFRSFYEQGNPNAPKPHRPLVQK+VE Sbjct: 49 CVFIKDGKVIASGRNRTNETRNATRHAEMEAIDILLEKWQRDGLSKSDVAETFSKCILYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHSSALSHL--SEVPQRKGFKCTGGLLASEAVSLFRSFYEQGNPNAPKPHRPLVQKEVE 202
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A067FEM3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029549mg PE=4 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.744e-61 Identity = 117/155 (75.48%), Postives = 139/155 (89.68%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFIS-DKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKV 1586 CVI++DG++IA GRNRTTETRNATR+AEMEAID LL+ WQ++GLS++E+A+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLH S S+ S D + ++GFKCTGG+MASEA+SLFRSFYEQGNPNAPKPHRPLV + + Sbjct: 36 CVILEDGKVIAAGRNRTTETRNATRHAEMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKMLNSGDVLGRKGFKCTGGVMASEAVSLFRSFYEQGNPNAPKPHRPLVHQAM 190
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: V4UJZ5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009594mg PE=4 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 1.744e-61 Identity = 117/155 (75.48%), Postives = 139/155 (89.68%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFIS-DKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKV 1586 CVI++DG++IA GRNRTTETRNATR+AEMEAID LL+ WQ++GLS++E+A+ FS+C LYVTCEPCIMCAAALS LGIK+VYYGCANEKFGGCGSILSLH S S+ S D + ++GFKCTGG+MASEA+SLFRSFYEQGNPNAPKPHRPLV + + Sbjct: 36 CVILEDGKVIAAGRNRTTETRNATRHAEMEAIDVLLDQWQKNGLSQSEIAEKFSKCCLYVTCEPCIMCAAALSILGIKEVYYGCANEKFGGCGSILSLHLSDSKMLNSGDVLGRKGFKCTGGVMASEAVSLFRSFYEQGNPNAPKPHRPLVHQAM 190
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: W9S8D4_9ROSA (tRNA-specific adenosine deaminase 2 OS=Morus notabilis GN=L484_005638 PE=4 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 9.751e-61 Identity = 115/156 (73.72%), Postives = 134/156 (85.90%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQ-RGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKKVE 1589 CVIIKDG++I+ GRNRTTE RNATR+AEMEAID LL+ WQ GLSK E+A++FS+CILYVTCEPCIMCA ALS LGI +V+YGCANEKFGGCGSILSLH SE S +PQ +GFKC GG+MASEAISLFR FYEQGNPNAPKPHRP+V+++ + Sbjct: 36 CVIIKDGKVISSGRNRTTEARNATRHAEMEAIDMLLDKWQERGLSKYEIAEHFSKCILYVTCEPCIMCATALSILGISEVFYGCANEKFGGCGSILSLHLGNSESHNSGGIPQGKGFKCRGGIMASEAISLFRGFYEQGNPNAPKPHRPVVRQETQ 191
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: A0A0A0LZX4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G425900 PE=4 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 9.890e-60 Identity = 114/153 (74.51%), Postives = 128/153 (83.66%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSEPFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQKK 1583 CVI++DG +IA GRNRTTETRNATR+AEMEAID L+E WQRDGLS +EVA FS+C LYVTCEPCIMCA+ALS +GIK+VYYGCAN+KFGGCGSILSLH E S RGFKCT G+MASEA+ LFRSFYEQGNPNAPKPHRPLV + Sbjct: 36 CVIVEDGMVIATGRNRTTETRNATRHAEMEAIDILIEAWQRDGLSTSEVADKFSKCKLYVTCEPCIMCASALSIIGIKEVYYGCANDKFGGCGSILSLHLGSGEAPTSGNGLGRGFKCTAGIMASEAVGLFRSFYEQGNPNAPKPHRPLVNHQ 188
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: M1C3V5_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022976 PE=4 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 4.236e-59 Identity = 111/153 (72.55%), Postives = 133/153 (86.93%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSE-PFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580 CV ++DGE+IA GRNRTTETRNATR+AEMEAID L++ WQ++GLS EV++ FS+CIL+VTCEPCIMCAAALS+LGIK+ YYGCAN+KFGGCGS+LSLH+S S P ++GFKCTGG+MASEA+SL RSFYEQGNPNAPKPHRPL Q+ Sbjct: 32 CVFVEDGEVIASGRNRTTETRNATRHAEMEAIDFLVQQWQKNGLSPLEVSERFSKCILFVTCEPCIMCAAALSYLGIKEAYYGCANDKFGGCGSVLSLHTSSSNLPTSELASSKKGFKCTGGIMASEAVSLLRSFYEQGNPNAPKPHRPLKQQ 184
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Match: K4CBY4_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g008650.2 PE=4 SV=1) HSP 1 Score: 208.764 bits (530), Expect = 7.995e-59 Identity = 111/153 (72.55%), Postives = 132/153 (86.27%), Query Frame = 3 Query: 1125 CVIIKDGELIALGXXXXXXXXXXXXXXXMEAIDNLLEMWQRDGLSKAEVAKNFSQCILYVTCEPCIMCAAALSFLGIKDVYYGCANEKFGGCGSILSLHSSCSE-PFISDKVPQRGFKCTGGLMASEAISLFRSFYEQGNPNAPKPHRPLVQK 1580 CV ++DGE+IA GRNRTTETRNATR+AEMEAID L++ WQ++GLS EV++ FS+C LYVTCEPCIMCAAALS+LGIK+ YYGCAN+KFGGCGS+LSLH+S S P ++GFKCTGG+MASEA+SL RSFYEQGNPNAPKPHRPL Q+ Sbjct: 59 CVFVEDGEVIASGRNRTTETRNATRHAEMEAIDFLVQQWQKNGLSPLEVSERFSKCTLYVTCEPCIMCAAALSYLGIKEAYYGCANDKFGGCGSVLSLHTSNSNLPTSELASSKKGFKCTGGIMASEAVSLLRSFYEQGNPNAPKPHRPLKQQ 211 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 13
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BLAST of g.barbadense_cottongen_reftransV1_0096985 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0096985 ID=g.barbadense_cottongen_reftransV1_0096985; Name=g.barbadense_cottongen_reftransV1_0096985; organism=Gossypium barbadense; type=contig; length=2125bpback to top |