g.barbadense_cottongen_reftransV1_0091728, g.barbadense_cottongen_reftransV1_0091728 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: TOCC_ARATH (Tocopherol cyclase, chloroplastic OS=Arabidopsis thaliana GN=VTE1 PE=2 SV=1) HSP 1 Score: 409.453 bits (1051), Expect = 1.015e-128 Identity = 189/254 (74.41%), Postives = 215/254 (84.65%), Query Frame = -3 Query: 685 RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTT-TPEVLKTALQ 1443 RT Y TVK+ARWEYSTRP YGWGDVG+KQKSTAGW AAFP+FEPHWQICMA GLSTGWIEW GERFEF+DAPSYSEKNWGGGFPRKWFW QCNVFEGA+G+++LT GGLRQLPGLTET+EN AL+ VHYDG YEFVPWNGVV WE++ WGYW I AEN+ H+VELEA T ++GT L APT E GL AC D+C G+L L+IWE+ GSKGK+IL+ KS MAA+E+GGGPWF TWKG T+ TPE+LK ALQ Sbjct: 215 RTDYAETVKSARWEYSTRPVYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWKGDTSNTPELLKQALQ 468 HSP 2 Score: 176.792 bits (447), Expect = 1.975e-45 Identity = 78/119 (65.55%), Postives = 97/119 (81.51%), Query Frame = -2 Query: 2825 TSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3181 T ++ +D+ +SV PVYVPT NR+ RTPHSGYHFDGT R+FFEGWYF+VSIPE+++SFCFMYSVENP FR+ L+ LE +GPRFTGVGAQILGA D+Y+CQY +S NFWG + +L Sbjct: 52 TPNSETDK-ISVKPVYVPTSPNRELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVL 169 HSP 3 Score: 83.5741 bits (205), Expect = 3.120e-15 Identity = 36/52 (69.23%), Postives = 42/52 (80.77%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL+LGNTF A ++ P+KEVPPEEFNR+V EGFQ +P WHQG I DDGR Sbjct: 164 RHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGR 215
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: TOCC_ORYSJ (Probable tocopherol cyclase, chloroplastic OS=Oryza sativa subsp. japonica GN=VTE1 PE=2 SV=1) HSP 1 Score: 388.652 bits (997), Expect = 4.373e-121 Identity = 177/254 (69.69%), Postives = 209/254 (82.28%), Query Frame = -3 Query: 688 NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTAL 1449 + R+ Y V+ ARWEYSTRP YGWGDV SKQKSTAGWLAAFP FEPHWQICMA GLSTGWIEWDGERFEF++APSYSEKNWG GFPRKW+W QCNVF GASG+++LT AGGLR++ GL ET+E+ +LIG+HY+G FYEFVPW G V+W+IA WG+W ++ ENK HLVE+EATT + GT L APT+EAGL PAC DTC GDL L++WEK G KGK+ILD S+MAALEVGGGPWFN WKG T + E++ + Sbjct: 198 DGRSKYVPNVQTARWEYSTRPVYGWGDVTSKQKSTAGWLAAFPFFEPHWQICMAGGLSTGWIEWDGERFEFENAPSYSEKNWGAGFPRKWYWVQCNVFSGASGEVALTAAGGLRKI-GLGETYESPSLIGIHYEGKFYEFVPWTGTVSWDIAPWGHWKLSGENKNHLVEIEATTKEPGTALRAPTMEAGLVPACKDTCYGDLRLQMWEKRNDGGKGKMILDATSNMAALEVGGGPWFNGWKGTTVSNEIVNNVV 450 HSP 2 Score: 167.933 bits (424), Expect = 1.469e-42 Identity = 73/106 (68.87%), Postives = 88/106 (83.02%), Query Frame = -2 Query: 2825 PVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3142 PVY PTP +R RTPHSGYH+DGT R FFEGWYFKVSIPE +QSFCFMYSVENP+FR ++ L+ + HG RFTGVGAQILGA D+YICQ++++S NFWGS+ +L Sbjct: 49 PVYAPTPRDRALRTPHSGYHYDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDRVIHGSRFTGVGAQILGADDKYICQFTEKSNNFWGSRHELML 154 HSP 3 Score: 92.4337 bits (228), Expect = 4.786e-18 Identity = 39/58 (67.24%), Postives = 47/58 (81.03%), Query Frame = -2 Query: 1919 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGRCLLLLN 2092 RHEL+LGNTF+ N S PP EVPP+EF+ +VLEGFQV+P+WHQGFIRDDGR + N Sbjct: 149 RHELMLGNTFIPNNGSTPPEGEVPPQEFSSRVLEGFQVTPIWHQGFIRDDGRSKYVPN 206
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: TOCC_MAIZE (Probable tocopherol cyclase, chloroplastic OS=Zea mays GN=SDX1 PE=2 SV=1) HSP 1 Score: 384.415 bits (986), Expect = 1.719e-119 Identity = 176/244 (72.13%), Postives = 206/244 (84.43%), Query Frame = -3 Query: 718 NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKT 1449 + R++Y V+ ARWEYSTRP YGWGDV SKQ STAGWLAAFP FEPHWQICMA GLSTGWIEWDGERFEF++APSYSEKNWGGGFPRKW+W QCNVF GASG++SLT AGGLR++ GL +T+E+ +LIG+HY+G F+EFVPW G V+W+I WG W ++ ENKTHLVE+EATT +SGT L APT+EAGL PAC DTC GDL L++WEK GSKG++ILD S+MAALEVGGGPWFN WKG T Sbjct: 202 DGRSNYVPNVQTARWEYSTRPVYGWGDVKSKQLSTAGWLAAFPFFEPHWQICMARGLSTGWIEWDGERFEFENAPSYSEKNWGGGFPRKWYWIQCNVFPGASGEVSLTAAGGLRKI-GLGDTYESPSLIGIHYEGQFFEFVPWTGTVSWDIGLWGLWKMSGENKTHLVEIEATTAESGTALRAPTIEAGLVPACKDTCYGDLRLQLWEKKYDGSKGEMILDATSNMAALEVGGGPWFNGWKGTT 444 HSP 2 Score: 169.088 bits (427), Expect = 6.004e-43 Identity = 74/110 (67.27%), Postives = 89/110 (80.91%), Query Frame = -2 Query: 2825 VSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3154 + P+Y PTP +R RTPHSGYHFDGT R FFEGWYFKVSIPE +QSFCFMYSVENP+FR ++ L+ L + PRFTGVGAQILGA D+YICQ+S++S NFWGS+ +L Sbjct: 49 AAAAPIYTPTPQDRSLRTPHSGYHFDGTARPFFEGWYFKVSIPECRQSFCFMYSVENPLFRDGMSDLDKLLYRPRFTGVGAQILGADDKYICQFSEKSNNFWGSRHELML 158 HSP 3 Score: 93.5893 bits (231), Expect = 1.926e-18 Identity = 38/52 (73.08%), Postives = 47/52 (90.38%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL+LGNTF++NK S PP EVPP++F+R+VLEG QV+P+WHQGFIRDDGR Sbjct: 153 RHELMLGNTFISNKESTPPQGEVPPQDFSRRVLEGLQVTPIWHQGFIRDDGR 204
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR6_ARATH (Protein NRT1/ PTR FAMILY 1.2 OS=Arabidopsis thaliana GN=NPF1.2 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.917e-39 Identity = 69/152 (45.39%), Postives = 101/152 (66.45%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLDSFAVIQTSTMDRHIT---PKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 CT D+VEELKALI+VIP+WSTGI++++ S SF ++Q ++MDR ++ F +PAGSFG II + + LYDR ++PLA K++G P LS K RM GL S AM +V+ RR+ AI +G ++ A+V ISA+W++P ++ G Sbjct: 320 CTTDKVEELKALIKVIPIWSTGIMMSINTSQSSFQLLQATSMDRRLSRHGSSFQVPAGSFGMFTIIALALWVILYDRAVIPLASKIRGRPFRLSVKLRMGLGLFMSFLAMAISAMVESFRRKKAISQGYANNSNAVVDISAMWLVPQYVLHG 471 HSP 2 Score: 43.8986 bits (102), Expect = 2.917e-39 Identity = 18/29 (62.07%), Postives = 23/29 (79.31%), Query Frame = 1 Query: 34 LRFLNKACVIKNPQQDLTSDGNASNPWSL 120 LRFLNKAC+I N ++++ SDG A NPW L Sbjct: 291 LRFLNKACLISNREEEIGSDGFALNPWRL 319
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR32_ARATH (Protein NRT1/ PTR FAMILY 1.1 OS=Arabidopsis thaliana GN=NPF1.1 PE=1 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 5.748e-39 Identity = 70/151 (46.36%), Postives = 102/151 (67.55%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLDSFAVIQTSTMDRHITPK--FDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 CT D+VE+LKAL++VIPVWSTGI++++ S +SF ++Q +MDR ++ F IPAGSFG II + + LYDR ILPLA K++G PV ++ K RM GL S AM V++ RR+ AI +GL++ + V ISA+W++P ++ G Sbjct: 321 CTTDQVEKLKALVKVIPVWSTGIMMSINVSQNSFQLLQAKSMDRRLSSNSTFQIPAGSFGMFTIIALISWVVLYDRAILPLASKIRGRPVRVNVKIRMGLGLFISFLAMAVSATVEHYRRKTAISQGLANDANSTVSISAMWLVPQYVLHG 471 HSP 2 Score: 40.4318 bits (93), Expect = 5.748e-39 Identity = 19/29 (65.52%), Postives = 20/29 (68.97%), Query Frame = 1 Query: 34 LRFLNKACVIKNPQQDLTSDGNASNPWSL 120 LRFLNKAC I N +DL SDG A N W L Sbjct: 292 LRFLNKACAISNRDEDLGSDGLALNQWRL 320
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR48_ARATH (Protein NRT1/ PTR FAMILY 1.3 OS=Arabidopsis thaliana GN=NPF1.3 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.139e-24 Identity = 65/165 (39.39%), Postives = 97/165 (58.79%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIA-VTYSLDSFAVIQTSTMDRH-ITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSGWVRISLELDRQNSF 610 C + +VE+LK+LI VIP+WSTGII++ VT SF V+Q TMDRH F+IP GS+G ++I+F++ + LYD +I+PL EP L RM G + S + +L +Y RR+ A + ++ +SA+W+LPY I+ G + +L QN F Sbjct: 242 CRVQQVEDLKSLINVIPIWSTGIILSLVTACQVSFIVLQAKTMDRHTFIQGFEIPPGSYGIFLVISFLLFLGLYDLVIVPLLSWALREPFRLGVMVRMWAGYVISVLCISALAATEYARRKTA-------RDESGTKLSAMWLLPYMILGG-IAEALNTIAQNEF 398
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR18_ARATH (Protein NRT1/ PTR FAMILY 3.1 OS=Arabidopsis thaliana GN=NPF3.1 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.448e-22 Identity = 56/159 (35.22%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 95 AMLQTHGVFCTIDRVEELKALIRVIPVWSTGIIIAVTYSLD-SFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 + H T+ RVEELK++IR+ P+ ++GI++ Y+ +F++ Q TM+RH+T F IPAGS + + I YDR+ + +A K G ++F RM G + S A + V+ R+ +AI+ GL DKP +V IS LW++P + G Sbjct: 311 GQIPNHWRLSTVHRVEELKSVIRMGPIGASGILLITAYAQQGTFSLQQAKTMNRHLTNSFQIPAGSMSVFTTVAMLTTIIFYDRVFVKVARKFTGLERGITFLHRMGIGFVISIIATLVAGFVEVKRKSVAIEHGLLDKPHTIVPISFLWLIPQYGLHG 469
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR21_ARATH (Protein NRT1/ PTR FAMILY 2.13 OS=Arabidopsis thaliana GN=NPF2.13 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 2.707e-21 Identity = 52/150 (34.67%), Postives = 87/150 (58.00%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGII-IAVTYSLDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 C++ VEE+K LIR++P+WS GII +A + +F V Q MDR++ PKF+IPAGS ++T + + YDR+ +P ++ G ++ QR+ TG++ + +M+ +V+ +RR +I G P M +S W+ P I+ G Sbjct: 350 CSVQEVEEVKCLIRIVPIWSAGIISLAAMTTQGTFTVSQALKMDRNLGPKFEIPAGSLSVISLLTIGIFLPFYDRVFVPFMRRITGHKSGITLLQRIGTGIVFAIFSMIVAGIVERMRRIRSINAG---DPTGMTPMSVFWLSPQLILMG 496
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR46_ARATH (Protein NRT1/ PTR FAMILY 5.4 OS=Arabidopsis thaliana GN=NPF5.4 PE=2 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.115e-20 Identity = 54/150 (36.00%), Postives = 91/150 (60.67%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYS-LDSFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 CT+++VEE+K ++R+IP+W + I+ T + L++F + Q S MDR I F IP +F + V +T ++ I LYDR+ +P+ K+ ++ QR+ GL + MV +V+ R ++A GL D P+ +V +S+LW+LP I+ G Sbjct: 296 CTVNQVEEVKLILRLIPIWISLIMFCATLTQLNTFFLKQGSMMDRTIGNHFTIPPAAFQSIVGVTILILIPLYDRVFVPMVRKITNHHSGITSLQRIGVGLFVATFNMVICGLVEAKRLKVARDHGLIDSPKEVVPMSSLWLLPQYILVG 445
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Match: PTR9_ARATH (Protein NRT1/ PTR FAMILY 5.10 OS=Arabidopsis thaliana GN=NPF5.10 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 6.407e-20 Identity = 50/150 (33.33%), Postives = 89/150 (59.33%), Query Frame = 2 Query: 122 CTIDRVEELKALIRVIPVWSTGIIIAVTYSLD-SFAVIQTSTMDRHITPKFDIPAGSFGASVIITFVVGIALYDRIILPLALKMKGEPVCLSFKQRMETGLLCSCAAMVSLTVVKYIRREIAIQEGLSDKPQAMVHISALWILPYAIMSG 568 C+ID +EE K+++R+ P+W T ++ AV ++ +F Q +TM+R ITP + I + + + ++ V+ I +YDR+++P+A +P ++ QR+ TG+ S AMV +V+ R + A GL D P A V +S W++P ++ G Sbjct: 305 CSIDELEEAKSVLRLAPIWLTCLVYAVVFAQSPTFFTKQGATMERSITPGYKISPATLQSFISLSIVIFIPIYDRVLIPIARSFTHKPGGITMLQRIGTGIFLSFLAMVVAALVEMKRLKTAADYGLVDSPDATVPMSVWWLVPQYVLFG 454
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2QJU4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1) HSP 1 Score: 501.901 bits (1291), Expect = 4.342e-164 Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TV ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 43 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 316 HSP 2 Score: 100.138 bits (248), Expect = 4.199e-19 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = -2 Query: 1937 IGRHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2098 +G+HEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 11 LGKHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 64
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2PTW5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 1.307e-163 Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TV ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 84 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 357 HSP 2 Score: 98.5969 bits (244), Expect = 1.763e-18 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 54 RHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 105 HSP 3 Score: 97.0561 bits (240), Expect = 5.380e-18 Identity = 43/54 (79.63%), Postives = 48/54 (88.89%), Query Frame = -2 Query: 2840 MYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSK 3001 MYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA +YICQYS+ESQNFWGS+ Sbjct: 1 MYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGANGKYICQYSEESQNFWGSR 54
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2LTZ7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G027200 PE=4 SV=1) HSP 1 Score: 506.523 bits (1303), Expect = 2.003e-163 Identity = 248/277 (89.53%), Postives = 255/277 (92.06%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TV ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGA GKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 214 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVNTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGARGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 487 HSP 2 Score: 266.159 bits (679), Expect = 2.332e-74 Identity = 128/188 (68.09%), Postives = 148/188 (78.72%), Query Frame = -2 Query: 2825 PTLNSINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3388 P + S+N+L FSSC+IGL SLNSK+ +K SQSS FN SNSP++ACSS++ ++ETSS A+ R VSV+PVYVPTP NR+TRTPHSGYHFDGTTRQFFEGWYFKVSIP RKQSFCFMYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA +YICQYS+ESQNFWGS+ L Sbjct: 3 PNIYSLNQLHQFSSCFIGLHSLNSKSTLKFSQSSTFNASPRELGPLRLGFR-SNSPVVACSSVSEIESETSSPAAKRSVSVSPVYVPTPVNRETRTPHSGYHFDGTTRQFFEGWYFKVSIPARKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGANGKYICQYSEESQNFWGSRHELAL 189 HSP 3 Score: 101.679 bits (252), Expect = 6.009e-19 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL LGNTF+ANK SRPP KEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 184 RHELALGNTFVANKASRPPGKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 235
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0B0MHV0_GOSAR (Tocopherol cyclase, chloroplastic-like protein OS=Gossypium arboreum GN=F383_13574 PE=4 SV=1) HSP 1 Score: 493.426 bits (1269), Expect = 2.519e-158 Identity = 244/277 (88.09%), Postives = 251/277 (90.61%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGFNC---RTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF C RT Y +TVK ARWEYSTRP YGWGDVGSKQKSTAGW AA PIFEPHWQICMAS WIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLT AGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTH+VELEATTTDSGTTL APTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEV+K+ALQ Sbjct: 215 KVLEGFQV---SPLWNQGFICDDGRTYYAKTVKTARWEYSTRPIYGWGDVGSKQKSTAGWAAALPIFEPHWQICMAS-----WIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTAAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHMVELEATTTDSGTTLRAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVIKSALQ 483 HSP 2 Score: 268.47 bits (685), Expect = 3.118e-75 Identity = 139/184 (75.54%), Postives = 156/184 (84.78%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 S+N+L FSSC+IGL S NSK+ +K SQSS FN PR LRPLRLGFRSNSP++AC S++ +TETSS A+ R VSV+PVYVPTP NRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENP F+R LT LE LQHGPRFTGVGAQ+LGA +YICQYS+ESQNFWGS+ L Sbjct: 7 SLNQLHQFSSCFIGLHSQNSKSTLKFSQSSTFNAFSPRELRPLRLGFRSNSPVVACRSVSEIETETSSPAAKRSVSVSPVYVPTPVNRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPAFKRTLTPLEMLQHGPRFTGVGAQVLGAKGKYICQYSEESQNFWGSRHELTL 190 HSP 3 Score: 102.834 bits (255), Expect = 2.474e-19 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHEL LGNTF+ANK SRPPSKEVPP+EFNRKVLEGFQVSPLW+QGFI DDGR Sbjct: 185 RHELTLGNTFVANKASRPPSKEVPPQEFNRKVLEGFQVSPLWNQGFICDDGR 236
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2Q9A5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 472.241 bits (1214), Expect = 4.451e-153 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 22 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 295
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2UGJ8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 473.781 bits (1218), Expect = 5.370e-152 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 132 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 405 HSP 2 Score: 181.8 bits (460), Expect = 1.047e-45 Identity = 82/88 (93.18%), Postives = 85/88 (96.59%), Query Frame = -2 Query: 2825 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3088 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+ +L Sbjct: 20 YHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 107 HSP 3 Score: 115.931 bits (289), Expect = 6.855e-24 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 102 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 153
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2TDW0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 5.574e-152 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 488 HSP 2 Score: 299.671 bits (766), Expect = 4.846e-86 Identity = 176/184 (95.65%), Postives = 178/184 (96.74%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 SINELRHFSSCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTASDRPV VNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGSK +L Sbjct: 7 SINELRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSKHELIL 190 HSP 3 Score: 110.923 bits (276), Expect = 6.312e-22 Identity = 51/52 (98.08%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 +HELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 185 KHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0D2RUB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G050600 PE=4 SV=1) HSP 1 Score: 476.863 bits (1226), Expect = 5.939e-152 Identity = 231/277 (83.39%), Postives = 246/277 (88.81%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK ARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GLSTGWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNGV++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+IWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMAGGLSTGWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGVLSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIWEKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 488 HSP 2 Score: 298.516 bits (763), Expect = 1.197e-85 Identity = 175/184 (95.11%), Postives = 178/184 (96.74%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 SINELRHFSSCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTASDRPV VNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+ +L Sbjct: 7 SINELRHFSSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASDRPVPVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 190 HSP 3 Score: 112.079 bits (279), Expect = 2.672e-22 Identity = 52/52 (100.00%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 185 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A061GK03_THECC (Tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) isoform 1 OS=Theobroma cacao GN=TCM_037170 PE=4 SV=1) HSP 1 Score: 454.521 bits (1168), Expect = 2.015e-143 Identity = 219/277 (79.06%), Postives = 237/277 (85.56%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RT+Y VK ARWEYSTRP YGWG+VGSKQKSTAGWLAA PIFEPHWQICMA GLSTGWIEWD ERFEFQ+APSYSEKNWGGGFPRKWFWAQCNVFEGASG++SLT GGLRQLPGLTETFEN ALIGVHYDG+FYEFVPWNGVV+WEIAQWG W + A+N+TH+ ELEATT D GTTL APT AGL PAC DTC GDL LKIWEK GG+KGKLILDVKSDMAALEVGGGPWFNTWKG+TTTPEV+K ALQ Sbjct: 216 KVLEGFQV---SPLWHQGFIRDDGRTTYANIVKTARWEYSTRPIYGWGNVGSKQKSTAGWLAALPIFEPHWQICMAGGLSTGWIEWDSERFEFQNAPSYSEKNWGGGFPRKWFWAQCNVFEGASGEVSLTAGGGLRQLPGLTETFENAALIGVHYDGVFYEFVPWNGVVSWEIAQWGSWYMEAKNETHMAELEATTNDPGTTLRAPTTVAGLAPACKDTCFGDLRLKIWEKKSGGTKGKLILDVKSDMAALEVGGGPWFNTWKGETTTPEVIKNALQ 489 HSP 2 Score: 273.092 bits (697), Expect = 1.014e-76 Identity = 145/189 (76.72%), Postives = 161/189 (85.19%), Query Frame = -2 Query: 2825 PTLNSINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDR-PVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3388 P + S+NEL HFSSC IG R LNSK VK SQSS FNG PR LRPLR+GFRSNS IIACSS+A +T TSS A++ VSVNPVYVPTPANR+ RTPHSGYHFDGTTRQFFEGWYFKV+IPE++QSFCFMYSVENP FRRKLT LE LQHGPRFTGVGAQILGAYD+YICQY++ESQNFWGS+ +L Sbjct: 3 PNIYSVNELHHFSSCCIGFRPLNSKPTVKFSQSSTFNGFSPRGLRPLRVGFRSNSRIIACSSVAEPETGTSSPAAESSAVSVNPVYVPTPANRNARTPHSGYHFDGTTRQFFEGWYFKVAIPEQRQSFCFMYSVENPAFRRKLTPLEMLQHGPRFTGVGAQILGAYDKYICQYTEESQNFWGSRHELIL 191 HSP 3 Score: 113.235 bits (282), Expect = 1.142e-22 Identity = 50/52 (96.15%), Postives = 52/52 (100.00%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFLANK+SRPPSKEVPP+EFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 186 RHELILGNTFLANKDSRPPSKEVPPQEFNRKVLEGFQVSPLWHQGFIRDDGR 237
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Match: A0A0B0N809_GOSAR (Tocopherol cyclase, chloroplastic-like protein OS=Gossypium arboreum GN=F383_11502 PE=4 SV=1) HSP 1 Score: 452.595 bits (1163), Expect = 9.507e-143 Identity = 222/277 (80.14%), Postives = 239/277 (86.28%), Query Frame = -3 Query: 685 KLLSRYQLFR*SCLLGLGF---NCRTSYTRTVKAARWEYSTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMASGLSTGWIEWDGERFEFQDAPSYSEKNWGGGFPRKWFWAQCNVFEGASGKISLTTAGGLRQLPGLTETFENTALIGVHYDGIFYEFVPWNGVVTWEIAQWGYWNIAAENKTHLVELEATTTDSGTTLLAPTVEAGLTPACLDTCLGDLTLKIWEKNVGGSKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 1506 K+L +Q+ S L GF + RTSY RTVK A WEY+TRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA GWIEWDGERFEFQDAPSYSEKNWGG FPRKWFWAQCNVFEGASG+++LT GGLRQLPGLTETFEN ALIGVHYDGIFYEFVPWNG+++WEIA WGYW IAAEN+TH+VELEATT D GTTL APT+EAGL PAC DTC G+L L+I K GG+KGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ Sbjct: 215 KVLEGFQV---SPLWHQGFIRDDGRTSYARTVKTACWEYTTRPTYGWGDVGSKQKSTAGWLAAFPIFEPHWQICMA-----GWIEWDGERFEFQDAPSYSEKNWGGAFPRKWFWAQCNVFEGASGEVALTAGGGLRQLPGLTETFENAALIGVHYDGIFYEFVPWNGILSWEIAPWGYWCIAAENETHMVELEATTNDPGTTLRAPTIEAGLAPACKDTCFGNLRLQIRVKKYGGTKGKLILDVKSDMAALEVGGGPWFNTWKGKTTTPEVLKTALQ 483 HSP 2 Score: 324.709 bits (831), Expect = 5.473e-95 Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = -2 Query: 2825 SINELRHFSSCYIGLRSLNSKTPVKLSQSSNFNXXXXXXXXXXXXXXRSNSPIIACSSIAGTDTETSSTASDRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDEYICQYSDESQNFWGSKFSTLL 3376 SINELRHF SCYIGLRSLNSKT VKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIA TDTETSSTAS+RPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYD+YICQYSDESQNFWGS+ +L Sbjct: 7 SINELRHFPSCYIGLRSLNSKTAVKLSQSSNFNGLFPRRLRPLRLGFRSNSPIIACSSIAETDTETSSTASNRPVSVNPVYVPTPANRDTRTPHSGYHFDGTTRQFFEGWYFKVSIPERKQSFCFMYSVENPVFRRKLTQLETLQHGPRFTGVGAQILGAYDKYICQYSDESQNFWGSRHELIL 190 HSP 3 Score: 114.005 bits (284), Expect = 6.363e-23 Identity = 51/52 (98.08%), Postives = 51/52 (98.08%), Query Frame = -2 Query: 1937 RHELILGNTFLANKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 2092 RHELILGNTFL NKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR Sbjct: 185 RHELILGNTFLTNKNSRPPSKEVPPEEFNRKVLEGFQVSPLWHQGFIRDDGR 236 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0091728 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0091728 ID=g.barbadense_cottongen_reftransV1_0091728; Name=g.barbadense_cottongen_reftransV1_0091728; organism=Gossypium barbadense; type=contig; length=3467bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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