g.barbadense_cottongen_reftransV1_0094928, g.barbadense_cottongen_reftransV1_0094928 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A0B0N994_GOSAR (Septin spn6 OS=Gossypium arboreum GN=F383_12164 PE=4 SV=1) HSP 1 Score: 373.629 bits (958), Expect = 2.116e-112 Identity = 190/231 (82.25%), Postives = 198/231 (85.71%), Query Frame = 1 Query: 1039 IFFLVSHKRIN-----DLVFICMYVFSSLVMKF---HEKCKLLSSILFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 +F+LVS+ I+ + FI L M+ + L L N GVSTYLGAAPIVACLERY+PNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK Sbjct: 1 MFYLVSNTLISTVCNSEFSFIVFSNILGLQMRNIFKYSGSGSLPEKLVNMEGGVSTYLGAAPIVACLERYEPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 231 HSP 2 Score: 371.703 bits (953), Expect = 1.312e-111 Identity = 182/188 (96.81%), Postives = 184/188 (97.87%), Query Frame = 3 Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQH-VLPKF 3305 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNS LEYGLSSEISLSAAQS QKIPLY+IAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKED VQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQH VLP+F Sbjct: 352 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSYLEYGLSSEISLSAAQSSQKIPLYSIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDNVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVVLPQF 539 HSP 3 Score: 223.402 bits (568), Expect = 7.048e-59 Identity = 104/107 (97.20%), Postives = 107/107 (100.00%), Query Frame = 2 Query: 2009 QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329 +HRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIG+HLS+WRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI Sbjct: 231 KHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGNHLSSWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 337 HSP 4 Score: 83.5741 bits (205), Expect = 3.681e-13 Identity = 40/41 (97.56%), Postives = 40/41 (97.56%), Query Frame = 2 Query: 869 VVCNSEFSFIVFSNILGLQMRNIFKYSGSGSLPEKLVNMEG 991 VCNSEFSFIVFSNILGLQMRNIFKYSGSGSLPEKLVNMEG Sbjct: 12 TVCNSEFSFIVFSNILGLQMRNIFKYSGSGSLPEKLVNMEG 52
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A0D2PSL8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G170100 PE=4 SV=1) HSP 1 Score: 369.392 bits (947), Expect = 7.368e-112 Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 1 Query: 1153 LFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 L N GVSTYLGAAPIVACLERY+PNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFP+LLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDF+GVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK Sbjct: 151 LVNMEGGVSTYLGAAPIVACLERYRPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPSLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFQGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 335 HSP 2 Score: 227.639 bits (579), Expect = 3.902e-61 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 3 Query: 189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 MEKQ YEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA Sbjct: 1 MEKQAYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 108 HSP 3 Score: 221.861 bits (564), Expect = 4.134e-59 Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 2 Query: 2009 QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329 +HRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSC+LSYIIGLDSLKAT I HHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI Sbjct: 335 KHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCILSYIIGLDSLKATCIDHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 441 HSP 4 Score: 68.1662 bits (165), Expect = 2.331e-8 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 1 Query: 646 VDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 750 +DPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG Sbjct: 109 MDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 143
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A0D2PZY3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G170100 PE=4 SV=1) HSP 1 Score: 368.237 bits (944), Expect = 1.103e-111 Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 1 Query: 1153 LFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 L N GVSTYLGAAPIVACLERY+PNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFP+LLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDF+GVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK Sbjct: 151 LVNMEGGVSTYLGAAPIVACLERYRPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPSLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFQGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 335 HSP 2 Score: 231.106 bits (588), Expect = 1.753e-62 Identity = 108/112 (96.43%), Postives = 110/112 (98.21%), Query Frame = 2 Query: 2009 QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGIRYISS 2344 +HRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSC+LSYIIGLDSLKAT I HHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGIRYISS Sbjct: 335 KHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCILSYIIGLDSLKATCIDHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGIRYISS 446 HSP 3 Score: 227.254 bits (578), Expect = 3.813e-61 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 3 Query: 189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 MEKQ YEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA Sbjct: 1 MEKQAYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 108 HSP 4 Score: 67.781 bits (164), Expect = 2.341e-8 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 1 Query: 646 VDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 750 +DPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG Sbjct: 109 MDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 143
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A0D2QRI4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G170100 PE=4 SV=1) HSP 1 Score: 372.089 bits (954), Expect = 1.241e-110 Identity = 178/187 (95.19%), Postives = 182/187 (97.33%), Query Frame = 3 Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVLPKF 3305 I REHVFWRIG+KQTEVSEHVFADVTKACISAELALPPFQ EDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSV+SVL DASPKAID+TKQLV ED V+VEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVLPKF Sbjct: 444 IGREHVFWRIGSKQTEVSEHVFADVTKACISAELALPPFQQEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVVSVLLDASPKAIDETKQLVNEDNVKVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVLPKF 630 HSP 2 Score: 335.88 bits (860), Expect = 1.667e-97 Identity = 166/185 (89.73%), Postives = 169/185 (91.35%), Query Frame = 1 Query: 1153 LFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 L N GVSTYLGAAPIVACLERY+PNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFP+LLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYE VVDF+GVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK Sbjct: 151 LVNMEGGVSTYLGAAPIVACLERYRPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPSLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYE------------VVDFQGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 323 HSP 3 Score: 228.409 bits (581), Expect = 8.077e-60 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 3 Query: 189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 MEKQ YEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA Sbjct: 1 MEKQAYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 108 HSP 4 Score: 222.246 bits (565), Expect = 8.087e-58 Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 2 Query: 2009 QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329 +HRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSC+LSYIIGLDSLKAT I HHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI Sbjct: 323 KHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCILSYIIGLDSLKATCIDHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 429 HSP 5 Score: 67.781 bits (164), Expect = 3.410e-8 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 1 Query: 646 VDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 750 +DPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG Sbjct: 109 MDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 143
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A0D2NAF2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G170100 PE=4 SV=1) HSP 1 Score: 371.318 bits (952), Expect = 3.343e-110 Identity = 178/187 (95.19%), Postives = 182/187 (97.33%), Query Frame = 3 Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVLPKF 3305 I REHVFWRIG+KQTEVSEHVFADVTKACISAELALPPFQ EDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSV+SVL DASPKAID+TKQLV ED V+VEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVLPKF Sbjct: 456 IGREHVFWRIGSKQTEVSEHVFADVTKACISAELALPPFQQEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVVSVLLDASPKAIDETKQLVNEDNVKVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVLPKF 642 HSP 2 Score: 369.777 bits (948), Expect = 1.207e-109 Identity = 178/185 (96.22%), Postives = 181/185 (97.84%), Query Frame = 1 Query: 1153 LFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 L N GVSTYLGAAPIVACLERY+PNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFP+LLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDF+GVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK Sbjct: 151 LVNMEGGVSTYLGAAPIVACLERYRPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPSLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFQGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 335 HSP 3 Score: 228.024 bits (580), Expect = 1.016e-59 Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 3 Query: 189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 MEKQ YEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA Sbjct: 1 MEKQAYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 108 HSP 4 Score: 222.246 bits (565), Expect = 9.524e-58 Identity = 103/107 (96.26%), Postives = 105/107 (98.13%), Query Frame = 2 Query: 2009 QHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329 +HRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSC+LSYIIGLDSLKAT I HHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI Sbjct: 335 KHRGWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCILSYIIGLDSLKATCIDHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 441 HSP 5 Score: 67.781 bits (164), Expect = 3.738e-8 Identity = 34/35 (97.14%), Postives = 35/35 (100.00%), Query Frame = 1 Query: 646 VDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 750 +DPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG Sbjct: 109 MDPVSAREKVLEVASSLGIRLSVAVAHEVFVNESG 143
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A061DT93_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao GN=TCM_005376 PE=4 SV=1) HSP 1 Score: 350.903 bits (899), Expect = 1.573e-104 Identity = 165/185 (89.19%), Postives = 176/185 (95.14%), Query Frame = 1 Query: 1153 LFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 L S KG+STYLGAAPIV CLERYQPNV+I SRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADK+RNLSF +LLDLSLPYAEIS SGE+CVMKAEGSGG+LNF TCAEQLLYEVGDPSAYITPDVV+DF+GV+FQPL+ SKVLCIGAKPSAHPVPDKLLQL+PK Sbjct: 4 LLMSQKGISTYLGAAPIVECLERYQPNVIIASRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKHRNLSFSHLLDLSLPYAEISFSGEVCVMKAEGSGGVLNFSTCAEQLLYEVGDPSAYITPDVVIDFQGVSFQPLTSSKVLCIGAKPSAHPVPDKLLQLVPK 188 HSP 2 Score: 255.758 bits (652), Expect = 9.681e-71 Identity = 132/189 (69.84%), Postives = 149/189 (78.84%), Query Frame = 3 Query: 2745 ISREHVFWRIGAKQTEVSE-----HVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296 I REH+FWRI AKQTEVSE HVF DV K C+ E LPPF ED+ NS S EI LSA QS QKIPLY++AHSRAGDKGNDLNFS+IP+ Q+ E LK+IITPQWVK V+SVL D+SPKAID+T++ + E V+VEIYEV GI SLNVVVRNILDGGVNCSRRIDRHGK ISDLILCQHV+ Sbjct: 309 IGREHIFWRIAAKQTEVSESKCQKHVFRDVMKDCVLHEPTLPPFPEEDIHNSS-----SPEIGLSATQSRQKIPLYSVAHSRAGDKGNDLNFSIIPYVVQDVERLKIIITPQWVKGVVSVLLDSSPKAIDETEKWMDE-HVKVEIYEVKGIHSLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQHVV 491 HSP 3 Score: 199.134 bits (505), Expect = 5.610e-51 Identity = 93/104 (89.42%), Postives = 97/104 (93.27%), Query Frame = 2 Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329 GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPGVS CVLSYIIGLDSLKATSI ++ STW+ASEDIRLRMDGLFQEKKHA+QL KEFTALYTNGPA GGGI Sbjct: 191 GWKGWGEISYGGYECVKRAKAAEFLVRSWMEEVFPGVSCCVLSYIIGLDSLKATSIDNYSSTWKASEDIRLRMDGLFQEKKHAEQLVKEFTALYTNGPASGGGI 294
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: A0A061DUE4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_005376 PE=4 SV=1) HSP 1 Score: 348.977 bits (894), Expect = 4.590e-102 Identity = 163/180 (90.56%), Postives = 174/180 (96.67%), Query Frame = 1 Query: 1168 KGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 KG+STYLGAAPIV CLERYQPNV+I SRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADK+RNLSF +LLDLSLPYAEIS SGE+CVMKAEGSGG+LNF TCAEQLLYEVGDPSAYITPDVV+DF+GV+FQPL+ SKVLCIGAKPSAHPVPDKLLQL+PK Sbjct: 157 KGISTYLGAAPIVECLERYQPNVIIASRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKHRNLSFSHLLDLSLPYAEISFSGEVCVMKAEGSGGVLNFSTCAEQLLYEVGDPSAYITPDVVIDFQGVSFQPLTSSKVLCIGAKPSAHPVPDKLLQLVPK 336 HSP 2 Score: 256.144 bits (653), Expect = 2.193e-69 Identity = 132/189 (69.84%), Postives = 149/189 (78.84%), Query Frame = 3 Query: 2745 ISREHVFWRIGAKQTEVSE-----HVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASPKAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296 I REH+FWRI AKQTEVSE HVF DV K C+ E LPPF ED+ NS S EI LSA QS QKIPLY++AHSRAGDKGNDLNFS+IP+ Q+ E LK+IITPQWVK V+SVL D+SPKAID+T++ + E V+VEIYEV GI SLNVVVRNILDGGVNCSRRIDRHGK ISDLILCQHV+ Sbjct: 457 IGREHIFWRIAAKQTEVSESKCQKHVFRDVMKDCVLHEPTLPPFPEEDIHNSS-----SPEIGLSATQSRQKIPLYSVAHSRAGDKGNDLNFSIIPYVVQDVERLKIIITPQWVKGVVSVLLDSSPKAIDETEKWMDE-HVKVEIYEVKGIHSLNVVVRNILDGGVNCSRRIDRHGKTISDLILCQHVV 639 HSP 3 Score: 199.519 bits (506), Expect = 4.076e-50 Identity = 101/141 (71.63%), Postives = 110/141 (78.01%), Query Frame = 2 Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI-----RYISS*FYIYGMYHIY---------VRKTKCQ 2398 GWKGWGEISYGGYECVKRAKAAE LVRSWMEE FPGVS CVLSYIIGLDSLKATSI ++ STW+ASEDIRLRMDGLFQEKKHA+QL KEFTALYTNGPA GGGI + I + G HI+ V ++KCQ Sbjct: 339 GWKGWGEISYGGYECVKRAKAAEFLVRSWMEEVFPGVSCCVLSYIIGLDSLKATSIDNYSSTWKASEDIRLRMDGLFQEKKHAEQLVKEFTALYTNGPASGGGISTGLKKEIVLEKQLIGREHIFWRIAAKQTEVSESKCQ 479 HSP 4 Score: 197.208 bits (500), Expect = 2.476e-49 Identity = 94/108 (87.04%), Postives = 101/108 (93.52%), Query Frame = 3 Query: 189 MEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 MEKQ+ EI++C+IK R N QRRKDKVYIGCGAGFGGDRPMAA KLLNRVKEL+YIVLECLAERTLAERY+AM SGGDGYDSNISEWMSLLLPLAV+RGTCIITNMGA Sbjct: 1 MEKQSCGEIYNCMIKQRTNRQRRKDKVYIGCGAGFGGDRPMAALKLLNRVKELDYIVLECLAERTLAERYRAMVSGGDGYDSNISEWMSLLLPLAVERGTCIITNMGA 108
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: M5X703_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002638mg PE=4 SV=1) HSP 1 Score: 311.612 bits (797), Expect = 1.461e-88 Identity = 147/195 (75.38%), Postives = 165/195 (84.62%), Query Frame = 1 Query: 1123 HEKCKLLSSILFNSLKGVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIPK 1707 HEK ++ G+STYLGAAPIV CLE+YQPNV+ITSRVADAALFLAPM+YELGWNWD LE LAQGSLAGHLLECGCQLTGGYFMHP DK+RN+SF LLDLSLPYAEISS G++ V KAEG+GG+LNF TCAEQLLYEVGDP AYITPDV++D R V+F P+S KVLC GAKPSA VPDKLL+L+PK Sbjct: 150 HEKSYIMEG-------GISTYLGAAPIVECLEKYQPNVIITSRVADAALFLAPMIYELGWNWDSLEQLAQGSLAGHLLECGCQLTGGYFMHPGDKSRNMSFSQLLDLSLPYAEISSDGKVFVAKAEGTGGVLNFSTCAEQLLYEVGDPGAYITPDVIIDIRDVSFYPISSCKVLCAGAKPSAVSVPDKLLRLVPK 337 HSP 2 Score: 188.734 bits (478), Expect = 1.656e-46 Identity = 103/188 (54.79%), Postives = 125/188 (66.49%), Query Frame = 3 Query: 2745 ISREHVFWRIGAKQTEVSEHVFADVTKACISAELALPPFQLEDMQNSCLEYGLSSEISLSAAQSGQKIPLYNIAHSRAGDKGNDLNFSVIPHCPQNFEMLKLIITPQWVKSVISVLPDASP----KAIDKTKQLVKEDKVQVEIYEVHGIQSLNVVVRNILDGGVNCSRRIDRHGKCISDLILCQHVL 3296 + REHV WR K H A + C+ E L Q ++++S + S A SG KIPLY++AH RAGDKGNDLNFS+IPH P + LK IITPQWVK V+S L ++SP AI++ + V E+ V+VEIYEV GI+SLNVVVR+ILDGGVNCSRRIDRHGK ISDLILCQ VL Sbjct: 457 VKREHVLWRTAVK------HTTALTSNICLPHESGLSMTQANEVKSSTNSDSPFIGSAFSPAPSGHKIPLYDVAHVRAGDKGNDLNFSMIPHFPPDIVRLKSIITPQWVKKVVSALLNSSPFPDMDAINERDKWVNEN-VKVEIYEVKGIRSLNVVVRDILDGGVNCSRRIDRHGKTISDLILCQQVL 637 HSP 3 Score: 181.8 bits (460), Expect = 2.822e-44 Identity = 99/165 (60.00%), Postives = 116/165 (70.30%), Query Frame = 3 Query: 183 ISMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGASMRI*KHRFKF*VVCQISPNALC*CSKLCLIFSFHTEHIDSFLDSGSGQCSRKGF 677 ++ME Q + I +C+IK R N Q+R+DKVYIGCGAGFGGDRP AA KLL RVKELNYIVLECLAERTLAERYQ M SGGDGYDS IS+WM LLLPLAV+RGTCIITNMGA + H + V+ +I+ S L L S H S ++GSG K + Sbjct: 1 MTMEIQEVDGIRNCVIKLRENSQKRRDKVYIGCGAGFGGDRPFAALKLLQRVKELNYIVLECLAERTLAERYQVMVSGGDGYDSRISDWMRLLLPLAVERGTCIITNMGA---MDPHGAQEKVI-EIA-------SSLGLSVSVAVAHEISVANTGSGSSHEKSY 154 HSP 4 Score: 166.777 bits (421), Expect = 2.007e-39 Identity = 81/104 (77.88%), Postives = 88/104 (84.62%), Query Frame = 2 Query: 2018 GWKGWGEISYGGYECVKRAKAAELLVRSWMEEAFPGVSSCVLSYIIGLDSLKATSIGHHLSTWRASEDIRLRMDGLFQEKKHAQQLAKEFTALYTNGPAGGGGI 2329 GWKGWGEISYGGYECVKRAKAAE LVRSWMEE PGVSS V+SYIIGLDSLKATS+ + S+ R DIRLRMDGLF+ K+HA +EFTALYTNGPAGGGGI Sbjct: 340 GWKGWGEISYGGYECVKRAKAAEFLVRSWMEEVIPGVSSHVVSYIIGLDSLKATSLSDNASS-RMVSDIRLRMDGLFKLKEHAVHFVREFTALYTNGPAGGGGI 442
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: V7ANY4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G096000g PE=4 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 3.932e-88 Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 1 Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIP 1704 G+STYLGAAPIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP D+ R++SF LLDLSLP+AEI G++CV KAEGSGG+LN TCAEQLLYEVGDP+AY+TPDVV++F+ V+F PLS S+VLC+GAKPS VPD+LLQL+P Sbjct: 164 GISTYLGAAPIVRCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDQYRDMSFLQLLDLSLPFAEICFDGQVCVAKAEGSGGVLNLSTCAEQLLYEVGDPAAYVTPDVVINFQDVSFSPLSSSRVLCLGAKPSTVSVPDQLLQLVP 341 HSP 2 Score: 185.267 bits (469), Expect = 2.479e-47 Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 3 Query: 174 ESKISMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 E + ME Q EEIH+ LIK R NPQRR+DKVY+GCGAGFGGDRP+AA KLL RV+ELNY+VLECLAERTL +RYQ M SGGDGYDS IS WMS+LLPLA++RGTCIITNMGA Sbjct: 3 EEVVVMEPQDEEEIHNSLIKLRSNPQRRRDKVYVGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLVDRYQIMMSGGDGYDSQISSWMSMLLPLALERGTCIITNMGA 115
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Match: V7AN86_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G096000g PE=4 SV=1) HSP 1 Score: 300.827 bits (769), Expect = 4.236e-88 Identity = 138/178 (77.53%), Postives = 160/178 (89.89%), Query Frame = 1 Query: 1171 GVSTYLGAAPIVACLERYQPNVLITSRVADAALFLAPMVYELGWNWDDLELLAQGSLAGHLLECGCQLTGGYFMHPADKNRNLSFPNLLDLSLPYAEISSSGEICVMKAEGSGGILNFGTCAEQLLYEVGDPSAYITPDVVVDFRGVTFQPLSRSKVLCIGAKPSAHPVPDKLLQLIP 1704 G+STYLGAAPIV CLE+YQPNV+ITSR+ADAALFLAPMVYELGWNWD+LE LAQGSLAGHLLECGCQLTGGYFMHP D+ R++SF LLDLSLP+AEI G++CV KAEGSGG+LN TCAEQLLYEVGDP+AY+TPDVV++F+ V+F PLS S+VLC+GAKPS VPD+LLQL+P Sbjct: 164 GISTYLGAAPIVRCLEKYQPNVIITSRIADAALFLAPMVYELGWNWDELEHLAQGSLAGHLLECGCQLTGGYFMHPGDQYRDMSFLQLLDLSLPFAEICFDGQVCVAKAEGSGGVLNLSTCAEQLLYEVGDPAAYVTPDVVINFQDVSFSPLSSSRVLCLGAKPSTVSVPDQLLQLVP 341 HSP 2 Score: 185.267 bits (469), Expect = 2.782e-47 Identity = 86/113 (76.11%), Postives = 97/113 (85.84%), Query Frame = 3 Query: 174 ESKISMEKQTYEEIHDCLIKPRINPQRRKDKVYIGCGAGFGGDRPMAAKKLLNRVKELNYIVLECLAERTLAERYQAMASGGDGYDSNISEWMSLLLPLAVDRGTCIITNMGA 512 E + ME Q EEIH+ LIK R NPQRR+DKVY+GCGAGFGGDRP+AA KLL RV+ELNY+VLECLAERTL +RYQ M SGGDGYDS IS WMS+LLPLA++RGTCIITNMGA Sbjct: 3 EEVVVMEPQDEEEIHNSLIKLRSNPQRRRDKVYVGCGAGFGGDRPLAALKLLQRVQELNYLVLECLAERTLVDRYQIMMSGGDGYDSQISSWMSMLLPLALERGTCIITNMGA 115 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0094928 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094928 ID=g.barbadense_cottongen_reftransV1_0094928; Name=g.barbadense_cottongen_reftransV1_0094928; organism=Gossypium barbadense; type=contig; length=3578bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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