g.barbadense_cottongen_reftransV1_0094670, g.barbadense_cottongen_reftransV1_0094670 (contig) Gossypium barbadense
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2RBI2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G076600 PE=4 SV=1) HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0 Identity = 418/421 (99.29%), Postives = 419/421 (99.52%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIRMSFLSSCFTCHGF 1871 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTV NLMAGSPFSTGVLMADGVSVHYLGCRAAAAAGDVDGDQSCMVQSDSNVARSAIIPGWSSDLVSESSLPSSQDEKLDEIKDAEMMLCRVASRRDMATQMSPDNSSSHSSTR RSSFGHSPPPILPLPAVDNNDHPSKLD+REVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIRMSFLSSCFTCHGF Sbjct: 1 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVTNLMAGSPFSTGVLMADGVSVHYLGCRAAAAAGDVDGDQSCMVQSDSNVARSAIIPGWSSDLVSESSLPSSQDEKLDEIKDAEMMLCRVASRRDMATQMSPDNSSSHSSTRERSSFGHSPPPILPLPAVDNNDHPSKLDIREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIRMSFLSSCFTCHGF 421
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A061DGY7_THECC (Remorin family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_000622 PE=4 SV=1) HSP 1 Score: 664.84 bits (1714), Expect = 0.000e+0 Identity = 355/421 (84.32%), Postives = 378/421 (89.79%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIRMSFLSSCFTCHGF 1871 MKKGSVSLSHL TFPSPG SDYRDNG VV+QKGWSSERV ANS G SRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKN NY LQRRPKSKSGPIVPPGIAFYSN SPSM LLDGGGSG+VRNLMAGSPFSTGVLMADGVSVHY GCR + A GD DG+QSCMVQ+DSNVARSAIIPGW SDLVSESSLPSSQDEKLDEIKDAE M+ RV SRRDMATQMSP+ SSSHSS R RSSF HSPPPILPLPA++N+DHPSKLD+REVQIDKRAT+TN KRHGSRRIKKG PDFE FY+N+ SALSLD++EAATSISKL REEAKI+AWENLQRAKAEAAIRKLEMKLEKKRSASMDKIL KLR AQ+KAQEMRSS+ KE+EQIPKTS K +FF+IRMS SCFTCH + Sbjct: 1 MKKGSVSLSHLATFPSPGASDYRDNGVVVAQKGWSSERVPHPANSTGCSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNANYQLQRRPKSKSGPIVPPGIAFYSNYSPSMQLLDGGGSGSVRNLMAGSPFSTGVLMADGVSVHYGGCRGSVAGGDGDGEQSCMVQNDSNVARSAIIPGW-SDLVSESSLPSSQDEKLDEIKDAETMISRVVSRRDMATQMSPEGSSSHSSPRERSSFCHSPPPILPLPAMENSDHPSKLDIREVQIDKRATMTNWPKRHGSRRIKKGVPDFEDFYQNNTAGSALSLDVSEAATSISKLHREEAKINAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILSKLRMAQMKAQEMRSSMPAKENEQIPKTSQKVSFFNIRMSSFRSCFTCHAY 420
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A0D2SWT0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G076600 PE=4 SV=1) HSP 1 Score: 656.366 bits (1692), Expect = 0.000e+0 Identity = 352/360 (97.78%), Postives = 356/360 (98.89%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEK 1688 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTV NLMAGSPFSTGVLMADGVSVHYLGCRAAAAAGDVDGDQSCMVQSDSNVARSAIIPGWSSDLVSESSLPSSQDEKLDEIKDAEMMLCRVASRRDMATQMSPDNSSSHSSTR RSSFGHSPPPILPLPAVDNNDHPSKLD+REVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLE + ++ Sbjct: 1 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVTNLMAGSPFSTGVLMADGVSVHYLGCRAAAAAGDVDGDQSCMVQSDSNVARSAIIPGWSSDLVSESSLPSSQDEKLDEIKDAEMMLCRVASRRDMATQMSPDNSSSHSSTRERSSFGHSPPPILPLPAVDNNDHPSKLDIREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEKRRDQ 360
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A061DHX3_THECC (Remorin family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_000622 PE=4 SV=1) HSP 1 Score: 634.795 bits (1636), Expect = 0.000e+0 Identity = 343/401 (85.54%), Postives = 363/401 (90.52%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPK 1811 MKKGSVSLSHL TFPSPG SDYRDNG VV+QKGWSSERV ANS G SRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKN NY LQRRPKSKSGPIVPPGIAFYSN SPSM LLDGGGSG+VRNLMAGSPFSTGVLMADGVSVHY GCR + A GD DG+QSCMVQ+DSNVARSAIIPGW SDLVSESSLPSSQDEKLDEIKDAE M+ RV SRRDMATQMSP+ SSSHSS R RSSF HSPPPILPLPA++N+DHPSKLD+REVQIDKRAT+TN KRHGSRRIKKG PDFE FY+N+ SALSLD++EAATSISKL REEAKI+AWENLQRAKAEAAIRKLEMKLEKKRSASMDKIL KLR AQ+KAQEMRSS+ KE+EQIPKTS K Sbjct: 1 MKKGSVSLSHLATFPSPGASDYRDNGVVVAQKGWSSERVPHPANSTGCSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNANYQLQRRPKSKSGPIVPPGIAFYSNYSPSMQLLDGGGSGSVRNLMAGSPFSTGVLMADGVSVHYGGCRGSVAGGDGDGEQSCMVQNDSNVARSAIIPGW-SDLVSESSLPSSQDEKLDEIKDAETMISRVVSRRDMATQMSPEGSSSHSSPRERSSFCHSPPPILPLPAMENSDHPSKLDIREVQIDKRATMTNWPKRHGSRRIKKGVPDFEDFYQNNTAGSALSLDVSEAATSISKLHREEAKINAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILSKLRMAQMKAQEMRSSMPAKENEQIPKTSQK 400
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: B9SC72_RICCO (DNA binding protein, putative OS=Ricinus communis GN=RCOM_1408470 PE=4 SV=1) HSP 1 Score: 408.683 bits (1049), Expect = 1.019e-131 Identity = 239/421 (56.77%), Postives = 289/421 (68.65%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVN-YHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFF--HIRMSFLSSCFTC 1862 M+K S LGTFPSPG ++++ KGW SERV + +G+SRRHISA LTPFYSGRT+PSKWEDAERWICSPVLGYGV+K H QRRPKSKSGPIV PGIA+YSNCSPSM ++D S +VRN +A SPFSTGVLM G+ HY G G + G + VARS PGWS SS S + K+D I DAE + RV SRRDMATQMSP+ S+ S SS P V+ +DHP+KL++REVQ+DKRAT+ +R+ RHGSRR KKG PD + +N++ + +++EA++ SKLQREEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRS SMDKIL KLRTAQ+KAQEMRSSI +D Q PK S K +FF H R++ +SSCFTC Sbjct: 1 MRKNLNSSLSLGTFPSPGAGNFQE-------KGWCSERVP---HPSGSSRRHISA--LTPFYSGRTMPSKWEDAERWICSPVLGYGVTKYSQCLHHQRRPKSKSGPIVSPGIAYYSNCSPSMQVVD---SSSVRNFIANSPFSTGVLMPKGLVPHYNG-------GGIGGQ--------TIVARSVSGPGWSDLPSESSSPSSQDE-KVDGINDAENTVTRVISRRDMATQMSPEGSTCSSPRERSSSPPSIP-------PVEQSDHPAKLEIREVQVDKRATLVSRTTRHGSRRSKKGLPDVQDINQNASDSRISLWNVSEASSEFSKLQREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSLSMDKILNKLRTAQIKAQEMRSSIPTTQDPQTPKISHKASFFHRHTRLTSVSSCFTC 383
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: B9H6G4_POPTR (Remorin family protein OS=Populus trichocarpa GN=POPTR_0005s18170g PE=4 SV=1) HSP 1 Score: 391.734 bits (1005), Expect = 3.343e-125 Identity = 234/424 (55.19%), Postives = 286/424 (67.45%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPI-VPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFH--IRMSFLSSCFTCHGF 1871 MK+ +S LG FPSPGG+ Y++N KGWSSER+ S+G+ RRHISA LTPFYSGR LPSKWEDAERWICSPVLGYGV+K+ H RR KSKSGPI +PPGI +Y NCSPSM ++DGG RN M SPFSTGVLM +GV H G G V+ S + +SD L SE S SSQDE+ + + D + R+ SRRDMATQMSP+ S+ S S SPP P+ +DHP+KL++REVQ+DKRATV SKR GSRRIK+G+PD E F N+A + S DI+E + SKLQREEAKI+AWENLQ+A+AEAAIRKLEMKLEKKRS+SMDKI+ KLR AQ+KA+EMRSS+S ++D+Q+ + S K FH R++ L SCFTCH F Sbjct: 1 MKQNLISSQSLGAFPSPGGARYQEN------KGWSSERIPHP--SSGSGRRHISA--LTPFYSGRALPSKWEDAERWICSPVLGYGVAKSSQCHPLRRAKSKSGPINLPPGIGYYHNCSPSMGVIDGG---IGRNFMVNSPFSTGVLMPNGVGAHCSGSGGGGGQGHVERLASALSRSD---------------LASEPSSSSSQDERPEGVDDGNNTVDRIISRRDMATQMSPEGSTHSSCRGRSS----SPPSTDPV-LEPQSDHPAKLEIREVQVDKRATVIRWSKRPGSRRIKRGQPDVEEFNPNAADAHSSSWDISEEVSDFSKLQREEAKITAWENLQKARAEAAIRKLEMKLEKKRSSSMDKIMNKLRIAQMKAEEMRSSMSIRQDQQVSQKSHKIKLFHKRARLTSLGSCFTCHAF 391
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A067GUX9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g014969mg PE=4 SV=1) HSP 1 Score: 382.874 bits (982), Expect = 2.051e-121 Identity = 237/423 (56.03%), Postives = 284/423 (67.14%), Query Frame = 3 Query: 636 HLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGV---SKN-VNYHLQRRPKSKSGPIVPPGIAFYSNC-SPS--MNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAI--IPG--WXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIR--MSFLSSCFTCH 1865 H TFPSPG + KGWSSERV +S SRRHISA+SLTPFYSGR LPSKWEDAERWICSPV GYG+ +KN ++ QRRPKSKSGPIVPP +++ SPS M +LDGG V+N +AGSPFSTGVL+AD +S ++ G Q ++ + S ARS +PG WS +SS S + KLD+I DAE ++ RV SRRDMATQMSP++S++ S S P + A NDHP+KL+VREVQIDK +T + SKRH SRRIK G PD + FY+N T A SLD++E A SISKLQREEAKI+AWENLQRAKAEAAIRKLEMKLEK+RS S DKIL KL+ AQ+KAQEMR SIS K+ +Q+PKT+ K FFH MS SCFTCH Sbjct: 27 HSDTFPSPG-----------APKGWSSERVPHPTSS---SRRHISAASLTPFYSGRALPSKWEDAERWICSPVSGYGLGLTNKNSLHSQFQRRPKSKSGPIVPPPPRMHNSIYSPSTGMQVLDGG---RVKNFVAGSPFSTGVLVADRISGNFYG-------------QGFLLHNGSYAARSRTSNVPGSGWSDLASDDSSPSSQDE-KLDDIPDAEAVVSRVVSRRDMATQMSPESSTNSSPRGKS-----SFSPAVRSVAELQNDHPAKLEVREVQIDKGSTTISWSKRHRSRRIKSGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEMKLEKERSYSTDKILNKLKLAQMKAQEMRISISAKQGQQLPKTAHKAAFFHKHGPMSSFRSCFTCH 413
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: V4SK02_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025727mg PE=4 SV=1) HSP 1 Score: 381.719 bits (979), Expect = 5.240e-121 Identity = 236/423 (55.79%), Postives = 284/423 (67.14%), Query Frame = 3 Query: 636 HLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGV---SKN-VNYHLQRRPKSKSGPIVPPGIAFYSNC-SPS--MNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAI--IPG--WXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIR--MSFLSSCFTCH 1865 H TFPSPG + +GWSSERV +S SRRHISA+SLTPFYSGR LPSKWEDAERWICSPV GYG+ +KN ++ QRRPKSKSGPIVPP +++ SPS M +LDGG V+N +AGSPFSTGVL+AD +S ++ G Q ++ + S ARS +PG WS +SS S + KLD+I DAE ++ RV SRRDMATQMSP++S++ S S P + A NDHP+KL+VREVQIDK +T + SKRH SRRIK G PD + FY+N T A SLD++E A SISKLQREEAKI+AWENLQRAKAEAAIRKLEMKLEK+RS S DKIL KL+ AQ+KAQEMR SIS K+ +Q+PKT+ K FFH MS SCFTCH Sbjct: 24 HSDTFPSPG-----------APRGWSSERVPHPTSS---SRRHISAASLTPFYSGRALPSKWEDAERWICSPVSGYGLGLTNKNSLHSQFQRRPKSKSGPIVPPPPRMHNSIYSPSTGMQVLDGG---RVKNFVAGSPFSTGVLVADRISGNFYG-------------QGFLLHNGSYAARSRTSNVPGSGWSDLASDDSSPSSQDE-KLDDIPDAEAVVSRVVSRRDMATQMSPESSTNSSPRGKS-----SFSPAVRSVAELQNDHPAKLEVREVQIDKGSTTISWSKRHRSRRIKSGFPDVDKFYQNVTGTCAPSLDLSEVAASISKLQREEAKITAWENLQRAKAEAAIRKLEMKLEKERSYSTDKILNKLKLAQMKAQEMRISISAKQGQQLPKTARKAAFFHKHALMSSFRSCFTCH 410
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: F6H4K2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0031g00610 PE=4 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 1.055e-115 Identity = 220/422 (52.13%), Postives = 277/422 (65.64%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMA-GSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAVDNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFF--HIRMSFLSSCFTCH 1865 MKK +V+ +LG+FPSPG S+Y D V KGWSSERV S NS RR+I S+L PF SGR LPSKWEDAERWI SPV GY V+K+ QRRPKSKSGP+ PG+A+ N SP+M + DGGG VRN M SPFSTGV++A+G+S+HY G +G Q V ++ ++ RS IPGWS L SS S + KL KDAE M+ V SRRD+ATQMSPD+++ S F P P+LP ++ H K +VR+VQ+DK T+ SK+HG++ + PD E +N+A A S DIAE + +I KL+REEAKI+AWENLQ+AKAEAAI+KLEMKLEKKR+ASMDKIL KLR A++KA+EMRSSIS + Q KTS K F +++ L CFTCH Sbjct: 1 MKKSAVTSHNLGSFPSPGTSNYGDGSGGVP-KGWSSERVPPSVNSG---RRYIGGSTLMPFNSGRALPSKWEDAERWISSPVSGYSVNKSSLAQPQRRPKSKSGPLGLPGVAYNPNYSPAMPVFDGGG---VRNFMGPSSPFSTGVMVAEGLSLHY---------GAGNGGQPHPVPNEHSMERSISIPGWSDFLSESSSPNSQDE-KLGGSKDAETMVSPVVSRRDIATQMSPDSNTHSSPKDR---FSFPPSPLLP--TLEQQTHSVKSEVRDVQVDKGVTMIRWSKKHGAKTTMRAPPDVEETDKNAAEAQASSWDIAEPSKNILKLKREEAKITAWENLQKAKAEAAIQKLEMKLEKKRAASMDKILSKLRMAEMKAEEMRSSISESQANQDSKTSHKVASFRKNVQKGSLGGCFTCH 400
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Match: A0A068U2E5_COFCA (Coffea canephora DH200=94 genomic scaffold, scaffold_8 OS=Coffea canephora GN=GSCOC_T00039894001 PE=4 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 1.072e-101 Identity = 212/420 (50.48%), Postives = 279/420 (66.43%), Query Frame = 3 Query: 609 MKKGSVSLSHLGTFPSPGGSDYRDNGAVVSQKGWSSERVARSANSNGNSRRHISASSLTPFYSGRTLPSKWEDAERWICSPVLGYGVSKNVNYHLQRRPKSKSGPIVPPGIAFYSNCSPSMNLLDGGGSGTVRNLMAGSPFSTGVLMADGVSVHYLGCRXXXXXGDVDGDQSCMVQSDSNVARSAIIPGWXXXXXXXXXXXXXXXXKLDEIKDAEMMLCRVASRRDMATQMSPDNXXXXXXXXXXXXFGHSPPPILPLPAV--DNNDHPSKLDVREVQIDKRATVTNRSKRHGSRRIKKGEPDFEGFYRNSAPTSALSLDIAEAATSISKLQREEAKISAWENLQRAKAEAAIRKLEMKLEKKRSASMDKILRKLRTAQVKAQEMRSSISGKEDEQIPKTSPKFTFFHIRMSFLSSCFTC 1862 MKK S S+ + G + SPG +Y DN KGWSSERV N NSRRH+SA++L PF SGRTLPSKW+DAERWI SPV GYGV K N QRRPKSKSGP+ PPG+ + N SP+ +L+GG T MAGSP +TGVL+ DG+S+HY +G +S V ++ +A +A PG SD ++E S+PSSQD +L + +AE + RV SRRD+ATQMSP+ S++SS + SSF P LP+PA +N + +K+++R+VQ+DK AT+T +SK+ G+RR+++ DF+ A DI+ AA ++SK +REEAKI+AWENLQ+AKAEAAIRKLEMKLEKKRSASMDKIL KLR AQ KAQ+MR+S + K Q ++ F +++ S L CF C Sbjct: 1 MKKSSGSIGNSGAYTSPGTPEYGDNYGRGIPKGWSSERVPLPTN---NSRRHVSAAALMPFNSGRTLPSKWDDAERWITSPVSGYGVCKTSNVQPQRRPKSKSGPLGPPGLMYMPNYSPTAPVLEGGSGST---FMAGSPLTTGVLVPDGLSIHY---------ATGNGVKSNSVFAERAIAHAATAPG-LSDFLNECSIPSSQDHELGYL-EAERGVSRVISRRDVATQMSPEG-STYSSPKGNSSFSAFP---LPIPAAVEQHNYNSAKVEIRDVQVDKGATITRQSKKLGARRMRRKSSDFKEL--------ASPWDISGAAKTLSKSRREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSASMDKILNKLRAAQTKAQDMRNSNTDKHAHQSRISTKSFFRKYMKTSPLIECFFC 391 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0094670 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094670 ID=g.barbadense_cottongen_reftransV1_0094670; Name=g.barbadense_cottongen_reftransV1_0094670; organism=Gossypium barbadense; type=contig; length=2299bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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