g.barbadense_cottongen_reftransV1_0095085, g.barbadense_cottongen_reftransV1_0095085 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A0D2V9Y6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G135000 PE=4 SV=1) HSP 1 Score: 907.901 bits (2345), Expect = 0.000e+0 Identity = 470/476 (98.74%), Postives = 472/476 (99.16%), Query Frame = -1 Query: 1009 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2436 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHD+TQARESISEYLQELGLSLEDSISISSNSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLE+LGLVDATFRFLLESFPRLLLLPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKF TFEKVGAAYKDIGKMLLKYPWI STSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFE LGL QETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR Sbjct: 1 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDLTQARESISEYLQELGLSLEDSISISSNSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEILGLVDATFRFLLESFPRLLLLPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFLTFEKVGAAYKDIGKMLLKYPWILSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEELGLAQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 476 HSP 2 Score: 223.787 bits (569), Expect = 2.247e-59 Identity = 108/113 (95.58%), Postives = 110/113 (97.35%), Query Frame = -2 Query: 171 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ 509 RINYLMEMGLSRR+IALMI RFPPLLGYSI+EVLKPKLNF LNTIGKP KDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ Sbjct: 476 RINYLMEMGLSRREIALMIRRFPPLLGYSIKEVLKPKLNFLLNTIGKPVKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ 588
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A0D2R7I6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G135000 PE=4 SV=1) HSP 1 Score: 907.131 bits (2343), Expect = 0.000e+0 Identity = 470/476 (98.74%), Postives = 472/476 (99.16%), Query Frame = -1 Query: 1009 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2436 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHD+TQARESISEYLQELGLSLEDSISISSNSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLE+LGLVDATFRFLLESFPRLLLLPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKF TFEKVGAAYKDIGKMLLKYPWI STSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFE LGL QETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR Sbjct: 1 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDLTQARESISEYLQELGLSLEDSISISSNSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEILGLVDATFRFLLESFPRLLLLPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFLTFEKVGAAYKDIGKMLLKYPWILSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEELGLAQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 476
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A0B0NNQ8_GOSAR (mTERF domain-containing 1, mitochondrial OS=Gossypium arboreum GN=F383_17946 PE=4 SV=1) HSP 1 Score: 905.205 bits (2338), Expect = 0.000e+0 Identity = 467/476 (98.11%), Postives = 472/476 (99.16%), Query Frame = -1 Query: 1009 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2436 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNP+NQTPHD+TQARESISEYLQELGLSLEDSISISSNSPKY+QMLVD VKELEEWNAWN+SNGEGDSLGFKEMII+MAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFS GDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATFRFLLESFPRLLLLPV SHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVE LAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR Sbjct: 1 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPFNQTPHDLTQARESISEYLQELGLSLEDSISISSNSPKYMQMLVDAVKELEEWNAWNNSNGEGDSLGFKEMIIFMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSVGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATFRFLLESFPRLLLLPVVSHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVEFLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 476 HSP 2 Score: 231.106 bits (588), Expect = 6.986e-62 Identity = 111/113 (98.23%), Postives = 112/113 (99.12%), Query Frame = -2 Query: 171 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ 509 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNF LNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKG+NIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ Sbjct: 476 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFLLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGRNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ 588
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A0D2UE25_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G135000 PE=4 SV=1) HSP 1 Score: 881.322 bits (2276), Expect = 0.000e+0 Identity = 457/463 (98.70%), Postives = 459/463 (99.14%), Query Frame = -1 Query: 1048 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPE 2436 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHD+TQARESISEYLQELGLSLEDSISISSNSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLE+LGLVDATFRFLLESFPRLLLLPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKF TFEKVGAAYKDIGKMLLKYPWI STSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFE LGL QETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPE Sbjct: 1 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDLTQARESISEYLQELGLSLEDSISISSNSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEILGLVDATFRFLLESFPRLLLLPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFLTFEKVGAAYKDIGKMLLKYPWILSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEELGLAQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPE 463
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A061G8T4_THECC (Mitochondrial transcription termination factor family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_027727 PE=4 SV=1) HSP 1 Score: 738.413 bits (1905), Expect = 0.000e+0 Identity = 391/486 (80.45%), Postives = 421/486 (86.63%), Query Frame = -1 Query: 979 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR*YFYFSTLFY 2436 MSTKSFS HWNLKS FPNTCFL F R+ NA P SFF PRIH PK Y PQPPL S P +QT H++TQA+ES+SEYLQ+LGLSLEDSISI+SNSPKY QMLVDGVKELEEWNAWN+SNGEGD LGFKEM+IYMAKEKGDNGKVAFLESVGL LSSAMSVARYLSSESLPS+I KVKYMKE IFS GDDK LSGKNARRMMM+LSI SDEDV+QTLSFFEKIEARRGGL+MLG VDATFRFLLESFPR+LLLPVESHL P+VE LENIGVPR S+G VFLLFPP+LF +QGIK+K S FEKVGAA KD+GKMLLKYPWI STSIQ NYE ILLFFEEEKIPK SVDRAIRSWPH+LGCS SKLKLMV+QFGEL +RNKK GRVIAKSPQLLL+KPQE LQ VLF EGLG D+ETVGKL RCPE+FAANID TLKKK+E L E GISN HLP VIKKYPE+LVSDV+K L PR FY L Y Sbjct: 1 MSTKSFSTHWNLKSLFPNTCFLHFHRKSFPNALPFSFFQYPRIHCPKTYFPQPPLALSYPSDQTSHNLTQAQESVSEYLQDLGLSLEDSISIASNSPKYTQMLVDGVKELEEWNAWNNSNGEGDHLGFKEMVIYMAKEKGDNGKVAFLESVGLTLSSAMSVARYLSSESLPSLIHKVKYMKEIIFSGGDDKW-LSGKNARRMMMYLSIPSDEDVEQTLSFFEKIEARRGGLDMLGSVDATFRFLLESFPRILLLPVESHLIPLVELLENIGVPRGSIGKVFLLFPPVLFCNVQGIKTKASAFEKVGAANKDVGKMLLKYPWILSTSIQNNYEHILLFFEEEKIPKASVDRAIRSWPHILGCSISKLKLMVEQFGELDVRNKKLGRVIAKSPQLLLRKPQELLQFVLFLEGLGFDRETVGKLGCRCPEIFAANIDKTLKKKIEFLVELGISNHHLPWVIKKYPELLVSDVDKALRPRYCFYSLQLHY 485 HSP 2 Score: 187.963 bits (476), Expect = 5.285e-47 Identity = 88/110 (80.00%), Postives = 101/110 (91.82%), Query Frame = -2 Query: 180 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSA 509 RI YLME+GLS+R+IALM+ RF PLLGYSIEEVL+PKL F L+T+ KP KDVV YPR+FSYSLEKKIKPRFWVLKG+N+ECSL+ MLGKNDEEFAAEFMGVGRML+SPS+ Sbjct: 500 RIQYLMEIGLSKREIALMVRRFSPLLGYSIEEVLRPKLKFLLDTMEKPVKDVVDYPRFFSYSLEKKIKPRFWVLKGRNMECSLKDMLGKNDEEFAAEFMGVGRMLISPSS 609
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A061G9L6_THECC (Mitochondrial transcription termination factor family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_027727 PE=4 SV=1) HSP 1 Score: 734.561 bits (1895), Expect = 0.000e+0 Identity = 387/476 (81.30%), Postives = 417/476 (87.61%), Query Frame = -1 Query: 1009 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPYLPQPPLVQSNPYNQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2436 MSTKSFS HWNLKS FPNTCFL F R+ NA P SFF PRIH PK Y PQPPL S P +QT H++TQA+ES+SEYLQ+LGLSLEDSISI+SNSPKY QMLVDGVKELEEWNAWN+SNGEGD LGFKEM+IYMAKEKGDNGKVAFLESVGL LSSAMSVARYLSSESLPS+I KVKYMKE IFS GDDK LSGKNARRMMM+LSI SDEDV+QTLSFFEKIEARRGGL+MLG VDATFRFLLESFPR+LLLPVESHL P+VE LENIGVPR S+G VFLLFPP+LF +QGIK+K S FEKVGAA KD+GKMLLKYPWI STSIQ NYE ILLFFEEEKIPK SVDRAIRSWPH+LGCS SKLKLMV+QFGEL +RNKK GRVIAKSPQLLL+KPQE LQ VLF EGLG D+ETVGKL RCPE+FAANID TLKKK+E L E GISN HLP VIKKYPE+LVSDV+K L PR Sbjct: 1 MSTKSFSTHWNLKSLFPNTCFLHFHRKSFPNALPFSFFQYPRIHCPKTYFPQPPLALSYPSDQTSHNLTQAQESVSEYLQDLGLSLEDSISIASNSPKYTQMLVDGVKELEEWNAWNNSNGEGDHLGFKEMVIYMAKEKGDNGKVAFLESVGLTLSSAMSVARYLSSESLPSLIHKVKYMKEIIFSGGDDKW-LSGKNARRMMMYLSIPSDEDVEQTLSFFEKIEARRGGLDMLGSVDATFRFLLESFPRILLLPVESHLIPLVELLENIGVPRGSIGKVFLLFPPVLFCNVQGIKTKASAFEKVGAANKDVGKMLLKYPWILSTSIQNNYEHILLFFEEEKIPKASVDRAIRSWPHILGCSISKLKLMVEQFGELDVRNKKLGRVIAKSPQLLLRKPQELLQFVLFLEGLGFDRETVGKLGCRCPEIFAANIDKTLKKKIEFLVELGISNHHLPWVIKKYPELLVSDVDKALRPR 475 HSP 2 Score: 187.963 bits (476), Expect = 3.728e-47 Identity = 88/110 (80.00%), Postives = 101/110 (91.82%), Query Frame = -2 Query: 180 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSA 509 RI YLME+GLS+R+IALM+ RF PLLGYSIEEVL+PKL F L+T+ KP KDVV YPR+FSYSLEKKIKPRFWVLKG+N+ECSL+ MLGKNDEEFAAEFMGVGRML+SPS+ Sbjct: 475 RIQYLMEIGLSKREIALMVRRFSPLLGYSIEEVLRPKLKFLLDTMEKPVKDVVDYPRFFSYSLEKKIKPRFWVLKGRNMECSLKDMLGKNDEEFAAEFMGVGRMLISPSS 584
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: B9RHT4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1573480 PE=4 SV=1) HSP 1 Score: 522.702 bits (1345), Expect = 1.781e-171 Identity = 281/475 (59.16%), Postives = 355/475 (74.74%), Query Frame = -1 Query: 1009 PNTCFLPFARRCSLNAFPLSFFHCPRIHSP------------KPYLPQPPLVQSNPYNQTPH---DVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2388 P T LPF+ +L +FP F PR+ P K + PQ NP N +P+ + RE+IS +L E G+++EDS SI+SN P+Y +ML+D VK+LEEWNAW E D+LGFKE ++YMAKEKGDNGKVAFLES+G LSSAM+VARYLS+ESLP++I KVKY+KE FS DDKG + G+NARRMMMHLSI D+D+QQTLS FEKI+ARRGGL+ LG DATFR+ +ESFPR LLL ++HL+PMVEF E++GVP+ M ++FLLFPP++ Y I+ IK K EKVGA +D GKM+ KYPWI STSIQ+NY++IL F + EK+ K S+D+AIRSWPHLLGCSTSKLK++VD FG LG+++KK G VIAKSPQLLL+KP+EFLQVV F + LG DQE+VGK++ RCPE+FA + + TL+KKVE L G+ DHL R IKKYPE+LVSD+ +TL PR Sbjct: 9 PTTANLPFSSPKTL-SFPQ--FRHPRLPFPNKAYSFTTQFLRKHFFPQ----CQNPSNPSPYLAEHLDDTREAISHFLVEFGITIEDSTSIASNCPQYAKMLIDSVKDLEEWNAWKSDEMEFDALGFKEKVLYMAKEKGDNGKVAFLESLGFTLSSAMNVARYLSTESLPALILKVKYIKEMFFSGSDDKGHI-GRNARRMMMHLSIPIDDDLQQTLSLFEKIQARRGGLDRLGSSDATFRYFIESFPRTLLLQPDAHLKPMVEFFESLGVPKERMDSIFLLFPPVILYDIKVIKRKVLALEKVGAVDEDFGKMIFKYPWILSTSIQDNYKEILSFCDAEKVAKASIDKAIRSWPHLLGCSTSKLKVIVDHFGILGVKHKKVGHVIAKSPQLLLRKPEEFLQVVSFLKELGFDQESVGKILVRCPEIFATSAEKTLRKKVEFLTWMGVYGDHLCRTIKKYPELLVSDIERTLHPR 475 HSP 2 Score: 136.732 bits (343), Expect = 3.060e-30 Identity = 61/99 (61.62%), Postives = 81/99 (81.82%), Query Frame = -2 Query: 213 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFM 509 R+ YLME+G+++ ++ LM+ RF PLLGYSIEEVL+PK F +NT+GK K+VV YPRYFSYSLEKKIKPR+W + +N+ECSL+ ML KND++FA F+ Sbjct: 475 RMKYLMEVGVTKEEVGLMVGRFSPLLGYSIEEVLRPKYEFLVNTMGKGVKEVVEYPRYFSYSLEKKIKPRYWAVMRRNVECSLKEMLDKNDDDFAHHFI 573
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: F6GYK9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0054g01030 PE=4 SV=1) HSP 1 Score: 521.161 bits (1341), Expect = 1.648e-170 Identity = 291/465 (62.58%), Postives = 361/465 (77.63%), Query Frame = -1 Query: 1009 LPFARRCSLNAFPLSFFHCPRIHSPK-PYLPQPPLVQSNPYNQTPHDVT--------QARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDSLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQ-GIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2373 LPF L FP F ++ P P+LPQ S +NQ D QAR ++SE L+E G+S E+S+ I+ NSPKYV+MLVDGV++LEEWNAW E +S FKE + +A+EKGD G++AFLES+GL LSSA+SVARYLSSESLP +I KV+++K+ FS G+D+G L GKNARRMMM+LSI DED+QQTLSFFEKIEARRGGL++L DA+F +L+ESFPRLLLL VESHL+PM++FLE+IGV R SM NV LL+PPI+FY I+ IK + FEK+GAA KD+G+ML+KYPWI STSIQENYE+IL FF EK+PK+SVD I+SWPHLLGCSTSKLKL+V+QFGEL +RNKK G++IA SPQLLL+KP EFL+VV F E LG D+ETVG+++ RCPE+FAANI+ TLKKK+E LA GI DHLPRVI+KYPE+ VSD+N+TLLPR Sbjct: 27 LPF----HLKPFPHKFPSITQLSFPHYPHLPQ----ASPSWNQQQEDEDEDEDEEEGQARAAVSEILRESGVSEEESVEIALNSPKYVKMLVDGVRDLEEWNAWKKGAEEAES--FKEKVYRLAREKGDYGRLAFLESIGLSLSSALSVARYLSSESLPGLIEKVRFVKQMFFSEGNDEGFL-GKNARRMMMYLSIPIDEDLQQTLSFFEKIEARRGGLDILCSKDASFGYLVESFPRLLLLSVESHLKPMMKFLEDIGVQRGSMRNVLLLYPPIIFYDIEKDIKPRLLAFEKIGAADKDLGRMLVKYPWIISTSIQENYEEILSFFYREKVPKSSVDSGIKSWPHLLGCSTSKLKLIVEQFGELDVRNKKLGQIIATSPQLLLQKPNEFLEVVSFLEELGFDRETVGRILGRCPEIFAANIEKTLKKKLEFLASIGIFKDHLPRVIRKYPELFVSDINRTLLPR 480 HSP 2 Score: 154.451 bits (389), Expect = 5.609e-36 Identity = 74/106 (69.81%), Postives = 85/106 (80.19%), Query Frame = -2 Query: 192 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLV 509 R YL + G S+R IA MI RF PLLGYS+EEVL+PKL F + T+ KP K+VV YPRYFSYSLEKKIKPRFWVLK +N++CSL+ ML KNDEEFAAEFM VGR V Sbjct: 480 RTKYLRKTGFSKRDIAFMIRRFSPLLGYSVEEVLRPKLEFLVKTMEKPVKEVVDYPRYFSYSLEKKIKPRFWVLKVRNVDCSLKDMLAKNDEEFAAEFMDVGRTPV 585
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: A0A067JM18_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22571 PE=4 SV=1) HSP 1 Score: 495.738 bits (1275), Expect = 1.155e-160 Identity = 283/489 (57.87%), Postives = 361/489 (73.82%), Query Frame = -1 Query: 1009 FPRMSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPR--IHSPKPYLPQPPLVQSNPYNQTPHDV-----TQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGDS---LGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2445 F M+TK S+ NL NT +LP + SL FP F P +H +L NP NQ+P RE+IS++LQE G+S EDS SI+SN PKY +ML D VK+LEE NAW + +G LGF+E ++YMAKEKGDNGKVAFLES+GL LSSAM+VARY+SSESL +I KVKYMK +F +G D GL GKNARRMMMHLSI DED+QQTLS FEKIEARRGGL MLG DA+F +L+ESFP +L+LP++SHL+P+VEFLE++GVP+ +G++FLLFPPI+ I+ IK K EK+GA +D GK+L KYPWI ST IQ+NY++I+ F EK+ K S D+AIRSWPHLLGCSTSKLK+M++QF LG+++KK G+VIAKSPQLLL+KP+ F++VV F + LG D+E+VGK++ RCPE+F +I+ T+++KVE L G+S +HLPR+IKKYPEVLVSDVN+TLLPR Sbjct: 5 FSTMTTKFLSVPTNLLFSSANTRYLP--QFHSLLFFPHKF---PSFLLHQRTQFLINRFPKCQNPANQSPSTARDLLSDDTREAISQFLQEFGISTEDSSSIASNCPKYAKMLFDSVKDLEELNAWKSTIADGREFGVLGFQEKLVYMAKEKGDNGKVAFLESLGLSLSSAMNVARYVSSESLLGLIHKVKYMK-GVFFSGSDYKGLIGKNARRMMMHLSIPVDEDLQQTLSLFEKIEARRGGLNMLGSFDASFHYLVESFPHILVLPLDSHLKPLVEFLESVGVPKEHIGSIFLLFPPIILCDIKSIKRKVLVLEKLGAVGEDFGKILQKYPWILSTGIQDNYKEIISFCNMEKVAKKSFDKAIRSWPHLLGCSTSKLKVMLEQFEALGVKDKKLGQVIAKSPQLLLRKPEAFIRVVSFLKDLGFDEESVGKILVRCPEIFGLSIEKTVRRKVEFLISIGVSEEHLPRIIKKYPEVLVSDVNRTLLPR 487 HSP 2 Score: 159.458 bits (402), Expect = 1.383e-37 Identity = 75/113 (66.37%), Postives = 90/113 (79.65%), Query Frame = -2 Query: 171 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMGVGRMLVSPSATFQ 509 R+ YLME+GLSR+ IA M+ RF PLLGYSI +VL+PK F +NT+ K +D+V YPRYFSYSLEKKI+PRFWVLKG+NIECSL+ ML KNDEEFAA+FM GRM S + Q Sbjct: 487 RMKYLMEVGLSRKDIAFMVRRFSPLLGYSINKVLRPKYEFLVNTMEKTVEDIVDYPRYFSYSLEKKIRPRFWVLKGRNIECSLQDMLDKNDEEFAAKFMDDGRMHAIQSPSHQ 599
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Match: B9HG78_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s15240g PE=4 SV=2) HSP 1 Score: 491.5 bits (1264), Expect = 2.865e-159 Identity = 296/500 (59.20%), Postives = 365/500 (73.00%), Query Frame = -1 Query: 1009 MSTKSFSIHWNLKSQFPNTCFLPFARRCSLNAFPLSFFHCPRIHSPKPY----LPQ---------PPLVQSNPY--------NQTPHDVTQARESISEYLQELGLSLEDXXXXXXXSPKYVQMLVDGVKELEEWNAWNDSNGEGD---SLGFKEMIIYMAKEKGDNGKVAFLESVGLPLSSAMSVARYLSSESLPSIIRKVKYMKENIFSAGDDKGGLSGKNARRMMMHLSISSDEDVQQTLSFFEKIEARRGGLEMLGLVDATXXXXXXXXXXXXXXPVESHLEPMVEFLENIGVPRRSMGNVFLLFPPILFYKIQGIKSKFSTFEKVGAAYKDIGKMLLKYPWIFSTSIQENYEQILLFFEEEKIPKTSVDRAIRSWPHLLGCSTSKLKLMVDQFGELGIRNKKFGRVIAKSPQLLLKKPQEFLQVVLFFEGLGLDQETVGKLVSRCPEVFAANIDTTLKKKVELLAEFGISNDHLPRVIKKYPEVLVSDVNKTLLPR 2436 M+TKS SI + PF S A PL H P+I P + LPQ PP Q+ +Q T+ +E+IS++LQE G+S +S SI+ NSPKY +ML D VK+LEEW +W S G+G+ +LGFKE + YMAKEKGDNGKVAFLES+GL LSS+M+VARYL ESLP+++ KVKYMKE +FS DDK L GK AR MMM+LSI DED+QQTLS FEK+EARRGGL+MLG + TFR L+ESFPR+LLLP++ HL+PMVEFLE+IGVP+ M +FLLFPP++ I GI K +KV A KD GKMLLKYPWI ST+IQ+NY++I+ FF EK+ K+SVD AIRSWPH+LGCSTSKL++MV+Q ELGIRNKK G+VI+KSPQLLL+KPQEFLQVVLF E LG D+ETVG++ SRCPE+FAA+I+ TLKKK+E L G+S DHLPRVIKKYPE+LVSDVN+T+LPR Sbjct: 1 MTTKSLSIPLDF----------PFP---SPKAHPLPTLH-PKIQFPCKFPLFSLPQRIQFLRNQCPPKCQNPNDNNNPVPYTSQQEAHFTETQEAISQFLQEFGISAAESNSIALNSPKYAKMLFDSVKDLEEWTSWK-SGGDGNEFATLGFKEKVAYMAKEKGDNGKVAFLESLGLSLSSSMNVARYLHGESLPNLVHKVKYMKEILFSDSDDKR-LVGKYARCMMMNLSIPIDEDLQQTLSLFEKVEARRGGLDMLGSSEVTFRCLVESFPRILLLPLDLHLKPMVEFLESIGVPKEHMREIFLLFPPVIICDITGINRKVQALKKVWAFDKDFGKMLLKYPWILSTAIQKNYKEIVSFFHMEKVDKSSVDTAIRSWPHILGCSTSKLEVMVEQLAELGIRNKKLGQVISKSPQLLLRKPQEFLQVVLFLEDLGFDRETVGQVASRCPEIFAASIEKTLKKKIEFLDRIGVSKDHLPRVIKKYPELLVSDVNRTILPR 484 HSP 2 Score: 156.762 bits (395), Expect = 1.017e-36 Identity = 71/100 (71.00%), Postives = 86/100 (86.00%), Query Frame = -2 Query: 210 RINYLMEMGLSRRQIALMIHRFPPLLGYSIEEVLKPKLNFPLNTIGKPAKDVVGYPRYFSYSLEKKIKPRFWVLKGKNIECSLEVMLGKNDEEFAAEFMG 509 R+ YL ++GLS++ IA M+ RF PLLGYSI+EVL+PK F +NT+ KP +D+VGYPRYFSYSLEKKI PRFWVLKG+NIECSL+ ML KNDEEFAA+FMG Sbjct: 484 RMKYLKDVGLSKKDIAFMVRRFSPLLGYSIDEVLRPKYEFLVNTMKKPVEDIVGYPRYFSYSLEKKIMPRFWVLKGRNIECSLKDMLAKNDEEFAADFMG 583 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 0
BLAST of g.barbadense_cottongen_reftransV1_0095085 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0095085 ID=g.barbadense_cottongen_reftransV1_0095085; Name=g.barbadense_cottongen_reftransV1_0095085; organism=Gossypium barbadense; type=contig; length=2724bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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