g.barbadense_cottongen_reftransV1_0094016, g.barbadense_cottongen_reftransV1_0094016 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP428_ARATH (Pentatricopeptide repeat-containing protein At5g50990 OS=Arabidopsis thaliana GN=PCMP-H59 PE=2 SV=2) HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0 Identity = 318/506 (62.85%), Postives = 398/506 (78.66%), Query Frame = 3 Query: 225 DHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLD-SNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 DH + +VLE+C+ S+ K HA+IFKLGYGTYPSL+ S V Y +C+R LAR+LL L V +NL+IE LM +GE G AKK +VITWNLMIGGYVRN ++EEAL + ML ++++P+KF+FAS + CARLG ++HA WVH LM + IELN ILSSAL+D+Y+KCG I T++EVF +DVS+WNAMI G A HGL +AI VFS+ME E++ PDSITF+G+LT CSH GL+EEG++YF LMS R+SI+P++EHYG MVDL GRAG ++EAY +IE+MP+EPDVVIWR+LLS+ R Y+ P+LGE+AI N+S+ KSGDYVLLSN+Y S K+WESA+ VRELM K+GIRK +G+SW+E GG+IHRFKAGD SH ET+ +YKVL+GLIQ+TK +GF+ TDLVLMD+SEEEKE NLN+HSEKLALAY ILK+SPG EI I KN+R+C DCHNWIK VSKLL RVII+RDRIRFH+FE G CSC DYW Sbjct: 29 DHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVLMDVSEEEKEENLNYHSEKLALAYVILKSSPGTEIRIQKNIRMCSDCHNWIKAVSKLLNRVIIMRDRIRFHRFEDGLCSCRDYW 534
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 393.275 bits (1009), Expect = 5.895e-125 Identity = 220/513 (42.88%), Postives = 310/513 (60.43%), Query Frame = 3 Query: 246 VLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCD-----RLLLARKLLDQVF-------RLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVA---IANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 VL+AC + + IH K G+G ++++LV Y+ C R+L + ++++ + D +V+ N++I+ M LG+ A+ F K V++WN MI GY N F++A+ FREM ++ P+ T SV+ +RLG++ W+H + I ++ +L SALIDMYSKCG I+ A VF +V W+AMING A HG DAI F KM + P + +I +LTACSH GLVEEGR+YF+ M S +EP+IEHYG MVDL GR+GLL+EA I MP++PD VIW+ALL ACR+ ++G+ + +M SG YV LSNMY S W +R MK+K IRK G S I++ GV+H F D SHP+ + + +L + + +L G+ P T VL+++ EE+KE L++HSEK+A A+G++ TSPG+ I I KNLRIC DCH+ IKL+SK+ R I VRDR RFH F+ GSCSC DYW Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646 HSP 2 Score: 103.605 bits (257), Expect = 1.353e-21 Identity = 72/279 (25.81%), Postives = 129/279 (46.24%), Query Frame = 3 Query: 486 FAKKCFHKTPVGDVITWNLMIGGYVRNSRFEE--ALSFFREML-DSNVEPDKFTFASVMTVCARLGAINHALWVHRL--------------------------------------------MTEKEIELNPI-LSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIY 1178 +A K F++ P + +WN +I G+ + + A++ F EM+ D VEP++FTF SV+ CA+ G I +H L MT++ I L + +ID Y + G + A+ +F+ V WN MI+G + +G DA+ VF +M+ +I P+ +T + +L A S G +E G ++ +L + I ++D++ + G++E+A V E +P E +V+ W A+++ I+ Sbjct: 77 YAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE-NVITWSAMINGFAIH 353
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana GN=PCMP-H82 PE=2 SV=1) HSP 1 Score: 380.948 bits (977), Expect = 4.899e-121 Identity = 210/491 (42.77%), Postives = 307/491 (62.53%), Query Frame = 3 Query: 297 HARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREML-----DSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNG-ADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEV-ENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRL---KSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 HA+I G P + SL+ Y C L A+++ D D N V+ G A+K F + P +VI+W+ +I GYV +++EAL FREM ++ V P++FT ++V++ C RLGA+ WVH + + +E++ +L +ALIDMY+KCG ++ AK VFN DV ++AMI LA +GL + +FS+M +NI P+S+TF+GIL AC H GL+ EG+ YF +M + I P I+HYG MVDL+GR+GL++EA + I +MP+EPDV+IW +LLS R+ K E A+ + L SG YVLLSN+Y RW + +R M+ KGI K+ G S++E+ GV+H F GD S E+E +Y +LD ++Q+ + G++ T VL+D++E++KE L++HSEKLA+A+ ++KT PG + I KNLRIC DCH +K++SKL R I+VRD RFH F GSCSC D+W Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAW--NSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.165e-120 Identity = 213/503 (42.35%), Postives = 306/503 (60.83%), Query Frame = 3 Query: 246 VLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKL----GEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMD-ISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 +L+AC S ++ + IHA+I KLGY V SL+ +Y LA L D++ D V N VI+ + G+ A F K + I+W MI GYV+ +EAL F EM +S+VEPD + A+ ++ CA+LGA+ W+H + + I ++ +L LIDMY+KCG ++ A EVF V W A+I+G A HG +AI+ F +M+ I P+ ITF +LTACS++GLVEEG+ F M Y+++P IEHYG +VDL GRAGLL+EA I+ MP++P+ VIW ALL ACRI++ +L GE+ IA + G YV +N++ K+W+ A R LMK++G+ K+ G S I L G H F AGDRSHPE E + + ++ + G++P+ + +L+D + ++E+E ++ HSEKLA+ YG++KT PG I I KNLR+C DCH KL+SK+ R I++RDR RFH F G CSC DYW Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPD--DVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIA-IDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620 HSP 2 Score: 85.8853 bits (211), Expect = 5.119e-16 Identity = 61/261 (23.37%), Postives = 118/261 (45.21%), Query Frame = 3 Query: 486 FAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIE-----LNPILSS--------------------------ALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGR---KYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 +A+ F D WNLMI G+ + E +L ++ ML S+ + +TF S++ C+ L A +H +T+ E +N +++S ++I Y K G++ A +F + W MI+G + +A+ +F +M+ ++ PD+++ L+AC+ G +E+G+ Y N +R ++ + V++D++ + G +EEA V + + + V W AL+S Sbjct: 67 YAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLN--KTRIRMDSVLG--CVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALISG 322
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2) HSP 1 Score: 367.466 bits (942), Expect = 1.317e-115 Identity = 197/502 (39.24%), Postives = 298/502 (59.36%), Query Frame = 3 Query: 246 VLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKME-VENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLK---SGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 +++A +D + IH+ + + G+G+ + SL+ Y C G+ A K F K P D++ WN +I G+ N + EEAL+ + EM ++PD FT S+++ CA++GA+ VH M + + N S+ L+D+Y++CGR++ AK +F+ + W ++I GLA +G +AI +F ME E + P ITF+GIL ACSH G+V+EG +YF M Y IEP+IEH+G MVDL RAG +++AY I++MP++P+VVIWR LL AC ++ L E A + +L+ SGDYVLLSNMY S +RW + +R+ M + G++K+ G S +E+G +H F GD+SHP+++ +Y L + + + EG++PQ V +D+ EEEKE + +HSEK+A+A+ ++ T I + KNLR+C DCH IKLVSK+ R I+VRDR RFH F+ GSCSC+DYW Sbjct: 127 LIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANC---------------------------------GDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595 HSP 2 Score: 112.079 bits (279), Expect = 2.196e-24 Identity = 65/228 (28.51%), Postives = 119/228 (52.19%), Query Frame = 3 Query: 486 FAKKCFHK--TPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSN-VEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALL 1160 +A K F K P+ +V WN +I GY A S +REM S VEPD T+ ++ + + +H ++ + ++L+ +Y+ CG + +A +VF+ D+ WN++ING A +G P +A+A++++M + I PD T + +L+AC+ G + G++ M + + + V++DL+ R G +EEA + + M V+ + V W +L+ Sbjct: 71 YAHKVFSKIEKPI-NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYM-IKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana GN=ELI1 PE=3 SV=1) HSP 1 Score: 359.762 bits (922), Expect = 2.804e-112 Identity = 198/496 (39.92%), Postives = 299/496 (60.28%), Query Frame = 3 Query: 267 SSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREML-DSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKME-VENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLG-EVA--IANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 S K+ IH + K G G P + LV Y + ++ A+K+ D++ + ++V +I G A+ F D+++WN+MI GY ++ +AL F+++L + +PD+ T + ++ C+++GA+ W+H + I LN + + LIDMYSKCG ++ A VFN D+ WNAMI G A HG DA+ +F++M+ + + P ITFIG L AC+H+GLV EG + F M Y I+P+IEHYG +V L GRAG L+ AY I+ M ++ D V+W ++L +C+++ LG E+A + ++ SG YVLLSN+Y S+ +E VR LMK+KGI K G S IE+ +H F+AGDR H +++ +Y +L + ++ K G++P T+ VL D+ E EKE +L HSE+LA+AYG++ T PG + I KNLR+C DCH KL+SK+ R I++RDR RFH F GSCSC D+W Sbjct: 139 SCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRM--PERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP145_ARATH (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H26 PE=2 SV=2) HSP 1 Score: 356.295 bits (913), Expect = 3.006e-111 Identity = 190/509 (37.33%), Postives = 292/509 (57.37%), Query Frame = 3 Query: 225 DHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVA---IANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVL-MDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 D+ + +L+AC ++ + +H KLG + +L+ Y +C+ + AR + D++ + C V+ +N MI GY R +R EALS FREM ++P++ T SV++ CA LG+++ W+H+ + +++ALIDM++KCG + A +F + D W+AMI A HG ++ +F +M EN+ PD ITF+G+L ACSH+G VEEGRKYF+ M S++ I P I+HYG MVDL RAG LE+AY I+ +P+ P ++WR LL+AC + L E I + GDYV+LSN+Y K+WE + +R++MK + K+ G S IE+ V+H F +GD T L++ LD ++++ KL G++P T +V+ +++++EKE L +HSEKLA+ +G+L T PG I + KNLR+C DCHN KL+S + R +++RD RFH FE G CSC D+W Sbjct: 128 DNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI-------------------------VEPC--------VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603 HSP 2 Score: 115.161 bits (287), Expect = 2.178e-25 Identity = 63/228 (27.63%), Postives = 123/228 (53.95%), Query Frame = 3 Query: 483 GFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 +A+ F D++ +N M GY R + E S F E+L+ + PD +TF S++ CA A+ +H L + ++ N + LI+MY++C + +A+ VF+ V +NAMI G A P +A+++F +M+ + + P+ IT + +L++C+ G ++ G K+ + + ++S ++ ++D+F + G L++A ++ E M + D W A++ A Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLG-KWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK-DTQAWSAMIVA 305
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP219_ARATH (Putative pentatricopeptide repeat-containing protein At3g08820 OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1) HSP 1 Score: 357.066 bits (915), Expect = 1.219e-110 Identity = 186/425 (43.76%), Postives = 272/425 (64.00%), Query Frame = 3 Query: 474 GEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLK---SGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 G+ A+ F D++TW+ MI GY NS +E + F +ML N++PD+F+ ++ CA LGA++ W L+ E N +++ALIDMY+KCG + EVF D+ + NA I+GLA +G + AVF + E I PD TF+G+L C H+GL+++G ++FN +S Y+++ +EHYG MVDL+GRAG+L++AY +I MP+ P+ ++W ALLS CR+ + +L E + + L+ +G+YV LSN+Y RW+ A VR++M KKG++KI G SWIEL G +H F A D+SHP ++ +Y L+ L + +L GF+P T+ V D+ EEEKE L +HSEKLA+A G++ T G+ I + KNLR+C DCH +KL+SK+ R I+VRD RFH F GSCSC DYW Sbjct: 261 GKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685 HSP 2 Score: 147.902 bits (372), Expect = 7.327e-36 Identity = 79/307 (25.73%), Postives = 149/307 (48.53%), Query Frame = 3 Query: 246 VLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 VL+AC +S K +H+ + K G+ + + SL+ Y RL A KL D++ P V+TW + GY + R EA+ F++M++ V+PD + V++ C +G ++ W+ + M E E++ N + + L+++Y+KCG+++ A+ VF+ D+ W+ MI G A++ P + I +F +M EN+ PD + +G L++C+ G ++ G +L+ R+ + ++D++ + G + + V + M E D+VI A +S Sbjct: 117 VLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI---------------------------------PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLI-DRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMK-EKDIVIMNAAISG 388 HSP 3 Score: 105.145 bits (261), Expect = 4.465e-22 Identity = 67/261 (25.67%), Postives = 122/261 (46.74%), Query Frame = 3 Query: 420 LDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHY--GVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLG 1196 L + +VNL+++ + + ++ F T ++ +N +I G+V N F E L F + + FTF V+ C R + + +H L+ + + ++L+ +YS GR+ A ++F+ V W A+ +G G +AI +F KM + PDS + +L+AC H G ++ G M +E Q + +V+L+ + G +E+A +V ++M VE D+V W ++ PK G Sbjct: 41 LHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYME---EMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEG 297
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 9.889e-110 Identity = 207/498 (41.57%), Postives = 295/498 (59.24%), Query Frame = 3 Query: 267 SSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDF--NVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTE--KEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLK---SGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 + +YK A + + K S + ++V Q + L R++ + F N+ IVN +I+ GE A F + P DVI+WN +IGGY + ++EAL F+EML S P+ T S++ CA LGAI+ W+H + + K + L ++LIDMY+KCG I+ A +VFN H +S WNAMI G A HG + +FS+M I PD ITF+G+L+ACSHSG+++ GR F M+ Y + P++EHYG M+DL G +GL +EA +I M +EPD VIW +LL AC+++ +LGE N+ +++ G YVLLSN+Y S RW R L+ KG++K+ G S IE+ V+H F GD+ HP +Y +L+ + + GF+P T VL ++ EE KEG L HHSEKLA+A+G++ T PG ++ I KNLR+C +CH KL+SK+ R II RDR RFH F G CSC DYW Sbjct: 244 TGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741 HSP 2 Score: 159.073 bits (401), Expect = 2.366e-39 Identity = 95/306 (31.05%), Postives = 157/306 (51.31%), Query Frame = 3 Query: 246 VLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRY-SIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALL 1160 VL++C S +K IH + KLG + SL+ Y+Q RL A K+ D+ D VV +I+ G A+K F + PV DV++WN MI GY ++EAL F++M+ +NV PD+ T +V++ CA+ G+I VH + + N + +ALID+YSKCG ++TA +F + DV WN +I G L +A+ +F +M P+ +T + IL AC+H G ++ GR + R + ++D++ + G +E A+ V ++ + + W A++ Sbjct: 140 VLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD--VVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI-LHKSLSSWNAMI 442 HSP 3 Score: 102.449 bits (254), Expect = 3.281e-21 Identity = 88/371 (23.72%), Postives = 159/371 (42.86%), Query Frame = 3 Query: 147 LTLETSSAAIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADH-------------------------------SDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 LT+ +SS F+ S P + R+H S+ +L C+ ++ IHA++ K+G ++ L+ +F ++ H GL +A F +++ WN M G+ +S AL + M+ + P+ +TF V+ CA+ A +H + + +L+ + ++LI MY + GR++ A +VF+ + H DV WNAMI+G A G +A+ +F M N+ PD T + +++AC+ SG +E GR+ +L + ++ ++DL+ + G LE A + E +P + DV+ W L+ Sbjct: 8 LTVPSSSYPFHFLPSSSDPPY-DSIRNHPSL-SLLHNCK---TLQSLRIIHAQMIKIGLHNTNYALSKLI----------------------EFCILS-----PHFEGLP---YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQ-VHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIGG 341
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Match: PP311_ARATH (Pentatricopeptide repeat-containing protein At4g14820 OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1) HSP 1 Score: 355.14 bits (910), Expect = 1.761e-109 Identity = 200/514 (38.91%), Postives = 304/514 (59.14%), Query Frame = 3 Query: 225 DHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLK---SGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGRE------IMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 D + ++ AC + + + AI+ + + L+ +LV Y + +AR+ ++ N+ + ++ G A+ F +T D++ W MI YV + +EAL F EM S ++PD + SV++ CA LG ++ A WVH + +E +++ALI+MY+KCG + ++VF +V W++MIN L+ HG DA+++F++M+ EN+ P+ +TF+G+L CSHSGLVEEG+K F M+ Y+I P++EHYG MVDLFGRA LL EA VIE+MPV +VVIW +L+SACRI+ + +LG+ A + L+ G VL+SN+Y +RWE +R +M++K + K +G S I+ G H F GD+ H ++ +Y LD ++ + KL G++P VL+D+ EEEK+ + HSEKLAL +G++ E I I KNLR+C DCH + KLVSK+ R IIVRDR RFH ++ G CSC DYW Sbjct: 211 DEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVR--NLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722 HSP 2 Score: 123.25 bits (308), Expect = 9.885e-28 Identity = 66/262 (25.19%), Postives = 125/262 (47.71%), Query Frame = 3 Query: 474 GEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMY-------------------------------SKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSA 1166 G +A+ F + DV+TWN MI Y R +EA F EM DSNV PD+ ++++ C R G + + ++ + E ++ ++ L +AL+ MY SKCGR+ A+ +F+ + D+ W MI+ P +A+ VF +M I PD ++ +++AC++ G++++ K+ + +E ++ +++++ + G L+ V E MP +VV W ++++A Sbjct: 160 GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA-KWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINA 419 HSP 3 Score: 88.9669 bits (219), Expect = 5.922e-17 Identity = 50/215 (23.26%), Postives = 96/215 (44.65%), Query Frame = 3 Query: 486 FAKKCFHKTPVG-DVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPV 1127 +A F P + I +N + R+S + F++ + D+F+F ++ +++ A+ + +H + + +P + + +DMY+ CGRI A+ VF+ H DV WN MI GL +A +F +M+ N+ PD + I++AC +G + R + + + +V ++ AG ++ A M V Sbjct: 62 YALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN-DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSV 275
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A0D2PYT6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G210900 PE=4 SV=1) HSP 1 Score: 1045.03 bits (2701), Expect = 0.000e+0 Identity = 530/539 (98.33%), Postives = 534/539 (99.07%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSAAIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 MLRNGVKKLTLETSSAAIGF SLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLV TYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPV DVITWNLMIGGYVRN+RFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMT+KEIELNPILSSALIDMYSKCGRIQTAKEVFN ADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAE VRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLI++TKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW Sbjct: 1 MLRNGVKKLTLETSSAAIGFTSLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVSTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVRDVITWNLMIGGYVRNARFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTKKEIELNPILSSALIDMYSKCGRIQTAKEVFNSADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAELVRELMKKKGIRKIRGRSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIRRTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLIRVIIVRDRIRFHQFEGGSCSCEDYW 539
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A061G6N9_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_014769 PE=4 SV=1) HSP 1 Score: 869.381 bits (2245), Expect = 0.000e+0 Identity = 437/542 (80.63%), Postives = 494/542 (91.14%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSA---AIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M RNGVKKL +TS+A SL +PDFLH+SRDHR+V ++LEAC+LSSDYK ASAIHA IFKLGYGTYPSLV +L+ TYLQC L+LA +L+DQVFR D N+VI+NLVIEHLM LGEYG AKK FHK PV D++TWN+MIGGYVRN+RFEEAL+FFREML SNV+PDKFTFASV+T CARLGA+NHALWVH L+TEKEIELN IL++ALIDMYSKCGRI TAKEVFN A+H+DVS+WNAMINGLA HGL F+AIAVFSKM VENI PDSITFI +LTACSHSGLVEEG+KYF+LMS YSI+PQIEHYG MVDL+GRAG LEEAYA+I+AMP+EPD+VIWRALLSAC+ Y+KP+LGEVAIAN+SRL+SGDYVLLSN+YCS+K+WESAE +RE+MKKKGIRKIRGRSWIELGG+IHRFKAGDRSHPETEGLYKVL+GLIQ+TKL+GFLP+T+LVLMDISEEEKEGNLNHHSEKLALAYGILKTSPG EIMISKNLRICHDCHNWIK+VSKLLIRVIIVRDRIRFH+FEGG CSC DYW Sbjct: 1 MQRNGVKKLIQQTSAAIRCTHSHTSLSFSPDFLHHSRDHRTVCEILEACKLSSDYKTASAIHAIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGEYGSAKKVFHKMPVRDLVTWNIMIGGYVRNARFEEALTFFREMLGSNVKPDKFTFASVITGCARLGALNHALWVHSLITEKEIELNAILNAALIDMYSKCGRIHTAKEVFNSAEHNDVSIWNAMINGLAIHGLAFEAIAVFSKMRVENILPDSITFIVLLTACSHSGLVEEGQKYFDLMSGHYSIQPQIEHYGAMVDLYGRAGQLEEAYAIIKAMPMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNIYCSVKKWESAERLREMMKKKGIRKIRGRSWIELGGIIHRFKAGDRSHPETEGLYKVLEGLIQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLRICHDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A061G016_THECC (Tetratricopeptide repeat-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_014769 PE=4 SV=1) HSP 1 Score: 868.996 bits (2244), Expect = 0.000e+0 Identity = 437/542 (80.63%), Postives = 494/542 (91.14%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSA---AIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M RNGVKKL +TS+A SL +PDFLH+SRDHR+V ++LEAC+LSSDYK ASAIHA IFKLGYGTYPSLV +L+ TYLQC L+LA +L+DQVFR D N+VI+NLVIEHLM LGEYG AKK FHK PV D++TWN+MIGGYVRN+RFEEAL+FFREML SNV+PDKFTFASV+T CARLGA+NHALWVH L+TEKEIELN IL++ALIDMYSKCGRI TAKEVFN A+H+DVS+WNAMINGLA HGL F+AIAVFSKM VENI PDSITFI +LTACSHSGLVEEG+KYF+LMS YSI+PQIEHYG MVDL+GRAG LEEAYA+I+AMP+EPD+VIWRALLSAC+ Y+KP+LGEVAIAN+SRL+SGDYVLLSN+YCS+K+WESAE +RE+MKKKGIRKIRGRSWIELGG+IHRFKAGDRSHPETEGLYKVL+GLIQ+TKL+GFLP+T+LVLMDISEEEKEGNLNHHSEKLALAYGILKTSPG EIMISKNLRICHDCHNWIK+VSKLLIRVIIVRDRIRFH+FEGG CSC DYW Sbjct: 1 MQRNGVKKLIQQTSAAIRCTHSHTSLSFSPDFLHHSRDHRTVCEILEACKLSSDYKTASAIHAIIFKLGYGTYPSLVTTLISTYLQCGWLVLAHQLIDQVFRSDCNLVILNLVIEHLMKLGEYGSAKKVFHKMPVRDLVTWNIMIGGYVRNARFEEALTFFREMLGSNVKPDKFTFASVITGCARLGALNHALWVHSLITEKEIELNAILNAALIDMYSKCGRIHTAKEVFNSAEHNDVSIWNAMINGLAIHGLAFEAIAVFSKMRVENILPDSITFIVLLTACSHSGLVEEGQKYFDLMSGHYSIQPQIEHYGAMVDLYGRAGQLEEAYAIIKAMPMEPDIVIWRALLSACQTYRKPELGEVAIANISRLESGDYVLLSNIYCSVKKWESAERLREMMKKKGIRKIRGRSWIELGGIIHRFKAGDRSHPETEGLYKVLEGLIQRTKLKGFLPETELVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGTEIMISKNLRICHDCHNWIKMVSKLLIRVIIVRDRIRFHRFEGGLCSCADYW 542
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A5BED5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_022557 PE=4 SV=1) HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0 Identity = 355/512 (69.34%), Postives = 425/512 (83.01%), Query Frame = 3 Query: 204 DFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 D + RDH+ + +LEAC+ SSD++ A HA+I K GYGTYPSL+ SLV TY CD L LA +LLD++ F+++ NL+I LM +GE+ FAK+ F K DV+TWN MIGG VRN RFEEAL FFREML+SNVEPD FTFASV+ CARLG+ +HA VH LM EK+I+LN ILSSALID+YSKCGRI TAK+VFN H DVSVWN+MINGLA HGL DAI VFS+ME+E++ PDSITFIGILTACSH GLVE+GR+YF+LM YSI+PQ+EHYG MVDL GRAGL+EEAYA+I+AMP+EPD+VIWRALLSACR ++ P+LGEVAIA +S L SGDY+LLSNMYCS+++W+SAE VRE+MK+ G+RK RGRSW+ELGGVIH+FKAGDRSHPET +YKVL+GLI++TKLEGF+P TDLVLMD+S+EE+E NLN HSEKLALAY ILKTSPG EI +SKNLR CHDCH W+K++S+LL RVIIVRDRIRFHQFEGG CSC DYW Sbjct: 51 DMVIQERDHQKLNCILEACKFSSDFRTAFQSHAKIIKFGYGTYPSLITSLVSTYAHCDCLDLAHQLLDEMPYWGFDLITANLIIASLMKVGEFDFAKRVFRKMLRRDVVTWNSMIGGCVRNERFEEALRFFREMLNSNVEPDGFTFASVINGCARLGSSHHAELVHGLMIEKKIQLNFILSSALIDLYSKCGRINTAKKVFNSIQHDDVSVWNSMINGLAIHGLALDAIGVFSQMEMESVSPDSITFIGILTACSHCGLVEQGRRYFDLMRRHYSIQPQLEHYGAMVDLLGRAGLVEEAYAMIKAMPMEPDIVIWRALLSACRNFKNPELGEVAIAKISHLNSGDYILLSNMYCSLEKWDSAERVREMMKRDGVRKNRGRSWVELGGVIHQFKAGDRSHPETGAIYKVLEGLIRRTKLEGFMPATDLVLMDVSDEEREENLNSHSEKLALAYVILKTSPGTEIRVSKNLRTCHDCHCWMKILSRLLSRVIIVRDRIRFHQFEGGLCSCRDYW 562
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: A0A067JFA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26358 PE=4 SV=1) HSP 1 Score: 705.286 bits (1819), Expect = 0.000e+0 Identity = 354/543 (65.19%), Postives = 432/543 (79.56%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSAA---IGFISLLSAPDFLHYSR-DHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M R G ++L +T A GF LS P H+ DH+ +LEAC+LS D + A+ H RI + GYGT S+ ASL+ TY+ C++L LA +++ QVF ++ +NLVI+ M +GEY AKK F K P DV+TWN MIGGYVRN +FEEAL F+ ML SNVEPDKFTFASV+T CARLGA+NHA W+H LM +K IE+N ILSSALIDMYSKCGRI+TAKEVF + +DVSVWN++INGLA HGL DA+ VFSKME EN+ PDS+TF+GIL ACSH GLV+EGRKYF+LM + YSI+PQ+EHYG MVDL GRAGLL+EAYA+I AMP+EPDV++WR LLSACR ++ +LGEVA+AN+S KSGDYVLLSN+YCS RW++A+ VRE+MK++G+RK RG+SW E V+HRF+AGD+SHPETE LYK+L+GLIQ+TKLEGF+P T+LV+MD+SEEEKE NL HHSEKLALAYGILKTSPG EI I KNLRIC+DCHNWIK+VS LL RVII+RDRIRFH+FEGGSCSC DYW Sbjct: 1 MQRYGARRLAAQTPMAINKWTGFNDSLSFPPHSHHENGDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 543
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: V4TKB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033814mg PE=4 SV=1) HSP 1 Score: 699.893 bits (1805), Expect = 0.000e+0 Identity = 358/541 (66.17%), Postives = 438/541 (80.96%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSA--AIGFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M +NG+K LT ++ A + S LS P LH+ HR++ VLE+C+ + + + S H RI K G+ TYPS+VASL+ Y CD+ LA ++LD+V DFN+V +N++IE+ M +GE AKK F K P DV++WN MIGG+VRN+RF+EAL FFREML S VEPDKFTFASV+T CARLGA+NHA WVH L+ EK+IELN ILS+ALIDMYSKCG+IQ AKEVF+ +DVSVWNAMI+G+A HGL DA A+F+KME+ N+ PDSITF+G+LTACSH GLVEEG KYF+ M SRYSI+PQ+EHYG MVDL GRAG +EEAY +I +M +EPDVV+WRALLSACR +++ +LGEVAIAN+SRL GDYVLLSNMYC ++RW++AE VRE+MKKKG+RK +G+SW+EL GVIH+FKAGDRSHPE E + K+L LIQ+TK EGFLP T+LVLMD+SEEEKEGNL HHSEKLALAYGILKTSPG EI ISKNLRICHDCH+WIK++S+LL RVIIVRDRIRFH+FEGG CSC DYW Sbjct: 1 MRKNGMKMLTRQSPMAIQSTSSRSSLSWPQGLHHEY-HRALCGVLESCKCNLELRVVSQTHTRIIKCGFETYPSVVASLMSAYKHCDKFGLANRILDEVSLSDFNLVTMNIIIENCMRIGECEVAKKVFCKMPDKDVVSWNSMIGGFVRNARFDEALRFFREMLSSKVEPDKFTFASVITGCARLGALNHAYWVHNLIIEKKIELNFILSAALIDMYSKCGKIQMAKEVFDTVQRNDVSVWNAMISGVAIHGLAADASAIFTKMEMFNVLPDSITFLGLLTACSHCGLVEEGCKYFDHMRSRYSIQPQLEHYGAMVDLLGRAGHIEEAYGLITSMTMEPDVVVWRALLSACRTFKRLELGEVAIANISRLMGGDYVLLSNMYCYLQRWDTAENVREIMKKKGVRKSQGKSWLELAGVIHQFKAGDRSHPEAEAIDKILGSLIQRTKSEGFLPATELVLMDVSEEEKEGNLYHHSEKLALAYGILKTSPGTEIRISKNLRICHDCHSWIKMISRLLRRVIIVRDRIRFHRFEGGLCSCGDYW 540
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: E6NU11_JATCU (JHL07K02.11 protein OS=Jatropha curcas GN=JHL07K02.11 PE=4 SV=1) HSP 1 Score: 696.812 bits (1797), Expect = 0.000e+0 Identity = 344/511 (67.32%), Postives = 418/511 (81.80%), Query Frame = 3 Query: 207 FLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 FL DH+ +LEAC+LS D + A+ H RI + GYGT S+ ASL+ TY+ C++L LA +++ QVF ++ +NLVI+ M +GEY AKK F K P DV+TWN MIGGYVRN +FEEAL F+ ML SNVEPDKFTFASV+T CARLGA+NHA W+H LM +K IE+N ILSSALIDMYSKCGRI+TAKEVF + +DVSVWN++INGLA HGL DA+ VFSKME EN+ PDS+TF+GIL ACSH GLV+EGRKYF+LM + YSI+PQ+EHYG MVDL GRAGLL+EAYA+I AMP+EPDV++WR LLSACR ++ +LGEVA+AN+S KSGDYVLLSN+YCS RW++A+ VRE+MK++G+RK RG+SW E V+HRF+AGD+SHPETE LYK+L+GLIQ+TKLEGF+P T+LV+MD+SEEEKE NL HHSEKLALAYGILKTSPG EI I KNLRIC+DCHNWIK+VS LL RVII+RDRIRFH+FEGGSCSC DYW Sbjct: 4 FLKILPDHQLFCDLLEACKLSQDIRTATETHTRIIRFGYGTNSSIAASLISTYVNCNQLNLAYQVIRQVFSWTVSLAGLNLVIDSFMRIGEYEIAKKVFCKMPDRDVVTWNSMIGGYVRNGKFEEALRSFQAMLSSNVEPDKFTFASVITACARLGALNHAQWLHDLMVQKRIEVNFILSSALIDMYSKCGRIETAKEVFESVERNDVSVWNSLINGLAVHGLALDAMMVFSKMEAENVLPDSLTFLGILKACSHCGLVKEGRKYFDLMENYYSIKPQLEHYGAMVDLLGRAGLLDEAYAMITAMPMEPDVIVWRILLSACRTHRNTELGEVAVANISGPKSGDYVLLSNIYCSQNRWDNAQEVREMMKEEGVRKRRGKSWFEWEDVVHRFRAGDKSHPETEALYKILEGLIQRTKLEGFVPSTELVMMDVSEEEKEENLYHHSEKLALAYGILKTSPGTEIRIYKNLRICYDCHNWIKMVSGLLSRVIIIRDRIRFHRFEGGSCSCGDYW 514
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: B9I418_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s11110g PE=4 SV=2) HSP 1 Score: 685.641 bits (1768), Expect = 0.000e+0 Identity = 345/543 (63.54%), Postives = 429/543 (79.01%), Query Frame = 3 Query: 123 MLRNGVKKLTLETSSAAI----GFISLLSAPDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 M N +K+LT + I + S+ +P ++ D++ +Y +L++ + S D K S IH+RI YGT PSL+ASL+L Y+ C+ + K++DQVF ++V +NL+I+ LM Y AK F+K DV+TWN MIGGYVR +RFEEAL FR M SNVEPDK+TFASV+ CA+LGA+ HA WVH L+ EK IELN ILSSALIDMYSKCG+IQTAKE+F+G ++V +WNAMI+GLA HGL DAI VF+KMEVEN+ PD+ITF+GILTACSH GLV+EGRKYF+LM SRYS++P IEHYG MVDL GRAGLLEEA+A+I++MP+EPDVVIWRALL ACR Y+KP+LGE A+AN+SRL+SGDYVLLSN+YCS KRW++A+GV E+MKKKG+ K+RG+S E G +H FKAGDRSHPETE +YK+L+GLIQ+TKL G++P TDLV MD+SEEEKEGNL HHSEKLALAYGILKT+ G E+ ISKNLRIC+DCH+WIK+VS+LL RVIIVRDRIRFH+FE G CSC DYW Sbjct: 1 MQLNVIKRLTTQPHMGIIRWNRSYSSVPVSPPPQQHNADYQELYNLLQSGKTSMDIKTLSKIHSRIITFSYGTSPSLMASLMLKYVHCNCRSIVYKVIDQVFCWSIDLVELNLIIDKLMRTENYRVAKMVFNKMRARDVVTWNTMIGGYVRKARFEEALRLFRFMNKSNVEPDKYTFASVINGCAKLGALKHAQWVHELLIEKRIELNFILSSALIDMYSKCGKIQTAKEIFDGVQRNNVCIWNAMISGLAVHGLALDAIKVFTKMEVENVLPDAITFLGILTACSHCGLVKEGRKYFDLMRSRYSVQPHIEHYGAMVDLLGRAGLLEEAFAMIKSMPMEPDVVIWRALLGACRTYKKPELGEAAMANISRLRSGDYVLLSNIYCSQKRWDTAQGVWEMMKKKGVHKVRGKSCFEWAGFLHPFKAGDRSHPETEAIYKMLEGLIQRTKLAGYVPTTDLVTMDVSEEEKEGNLYHHSEKLALAYGILKTTSGAEVRISKNLRICYDCHSWIKIVSRLLSRVIIVRDRIRFHRFENGLCSCGDYW 543
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: I1L0Y5_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=2) HSP 1 Score: 654.44 bits (1687), Expect = 0.000e+0 Identity = 337/518 (65.06%), Postives = 405/518 (78.19%), Query Frame = 3 Query: 201 PDF--LHYS---RDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 P F L YS D +++VLE CR+S+D K A+ HAR+ LG+ TYPSLVASL+ TY QC R +A VF ++ +NLVIE L+ G+ AKK F K V DV+TWN MIGGYVRN RF +ALS FR ML + VEPD FTFASV+T CARLGA+ +A WVH LM EK +ELN ILS+ALIDMY+KCGRI +++VF VSVWNAMI+GLA HGL DA VFS+ME+E++ PDSITFIGILTACSH GLVEEGRKYF +M +R+ I+PQ+EHYG MVDL GRAGL+EEAYAVI+ M +EPD+VIWRALLSACRI++K +LGEVAIAN+SRL+SGD+VLLSNMYCS+ W+ AE VR +MK +G+RK RG+SW+ELG IH+F A +SHPE + +Y+VL+GLIQ+ KLEGF P TDLVLMD+SEEEKE NL HSEKLA+AY +LKTSPG +I ISKNLRIC DCHNWIK+VSK+L R IIVRDRIRFHQFEGG CSC+DYW Sbjct: 29 PSFHSLSYSFPATDPTVLHRVLERCRVSTDLKTATKTHARVVVLGFATYPSLVASLISTYAQCHRPHIAL----HVFSRILDLFSMNLVIESLVKGGQCDIAKKVFGKMSVRDVVTWNSMIGGYVRNLRFFDALSIFRRMLSAKVEPDGFTFASVVTACARLGALGNAKWVHGLMVEKRVELNYILSAALIDMYAKCGRIDVSRQVFEEVARDHVSVWNAMISGLAIHGLAMDATLVFSRMEMEHVLPDSITFIGILTACSHCGLVEEGRKYFGMMQNRFMIQPQLEHYGTMVDLLGRAGLMEEAYAVIKEMRMEPDIVIWRALLSACRIHRKKELGEVAIANISRLESGDFVLLSNMYCSLNNWDGAERVRRMMKTRGVRKSRGKSWVELGDGIHQFNAAYQSHPEMKSIYRVLEGLIQRAKLEGFTPLTDLVLMDVSEEEKEENLMFHSEKLAMAYAVLKTSPGTKIRISKNLRICLDCHNWIKIVSKILNRKIIVRDRIRFHQFEGGVCSCKDYW 542
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Match: K4C855_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc06g068810.2 PE=4 SV=1) HSP 1 Score: 654.055 bits (1686), Expect = 0.000e+0 Identity = 323/514 (62.84%), Postives = 401/514 (78.02%), Query Frame = 3 Query: 198 APDFLHYSRDHRSVYKVLEACRLSSDYKAASAIHARIFKLGYGTYPSLVASLVLTYLQCDRLLLARKLLDQVFRLDFNVVIVNLVIEHLMGLGEYGFAKKCFHKTPVGDVITWNLMIGGYVRNSRFEEALSFFREMLDSNVEPDKFTFASVMTVCARLGAINHALWVHRLMTEKEIELNPILSSALIDMYSKCGRIQTAKEVFNGADHSDVSVWNAMINGLAAHGLPFDAIAVFSKMEVENIFPDSITFIGILTACSHSGLVEEGRKYFNLMSSRYSIEPQIEHYGVMVDLFGRAGLLEEAYAVIEAMPVEPDVVIWRALLSACRIYQKPKLGEVAIANMSRLKSGDYVLLSNMYCSMKRWESAEGVRELMXXXXXXXXXXXSWIELGGVIHRFKAGDRSHPETEGLYKVLDGLIQQTKLEGFLPQTDLVLMDISEEEKEGNLNHHSEKLALAYGILKTSPGREIMISKNLRICHDCHNWIKLVSKLLXXXXXXXXXXXFHQFEGGSCSCEDYW 1739 +P HYS+D+ + +LEAC++S + + + HA I KLGYG YPSL++ +V+TY CDRL LAR+LL ++ F+ V NL+I M +G AK F++ P+ D++TWN +IGGYV+N +EALS FR+ML SNVEPD +TFAS++T CARLGAI+HA WVH LMTE+ IELN ILSSALIDMYSKCGRI+ A+ +F+ + ++VSVWNAMINGL HGL DAI +FS ME EN+ PDSITFIG+LTACSH GLVEEG+KYF LM S Y I+PQ+EHYG MVDL GRAGLL+EAY VI+ MP+EPD ++WR LSACRI++ ++GEVA +S L SGDYVLLSN+YCS K+W++AE VR LMK KG+RK G+SW+E+G V+H+FKAGDRSHPE E +YK L LI QTKLEGF T+LVLMDIS+EEKE NL++HSEKLALAYGILK+SPG I +SKNLR C DCH+W+K+V+KLL R IIVRDRIRFH F G CSC DYW Sbjct: 41 SPTESHYSQDYHRLLCILEACKMSPNLRTTAGAHANIIKLGYGVYPSLISLMVVTYASCDRLNLARQLLVEIPTEYFDAVSANLMISRFMKMGTVDVAKMIFNEVPLRDLVTWNSLIGGYVKNDLCKEALSVFRKMLRSNVEPDGYTFASIITACARLGAIDHAKWVHHLMTERRIELNYILSSALIDMYSKCGRIEIARGIFDSVERTNVSVWNAMINGLGIHGLALDAIEIFSLMEPENVSPDSITFIGLLTACSHCGLVEEGQKYFQLMKSLYLIQPQLEHYGTMVDLLGRAGLLDEAYTVIKEMPIEPDAIMWRTFLSACRIHKNSEMGEVASTKISHLGSGDYVLLSNIYCSTKKWDNAEKVRCLMKWKGVRKNSGKSWVEVGNVVHQFKAGDRSHPEAELIYKTLKKLIHQTKLEGFSSTTELVLMDISDEEKEENLSYHSEKLALAYGILKSSPGTHIQVSKNLRTCPDCHSWMKMVAKLLNREIIVRDRIRFHHFADGYCSCGDYW 554 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 25
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BLAST of g.barbadense_cottongen_reftransV1_0094016 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium barbadense CottonGen RefTrans V1
Date Performed: 2016-11-02
Sequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0094016 ID=g.barbadense_cottongen_reftransV1_0094016; Name=g.barbadense_cottongen_reftransV1_0094016; organism=Gossypium barbadense; type=contig; length=2139bpback to top |