g.barbadense_cottongen_reftransV1_0092935, g.barbadense_cottongen_reftransV1_0092935 (contig) Gossypium barbadense
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 3.994e-35 Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSI 829 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR+NLNRRRRRSSLFDITTDSVS+ Sbjct: 94 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSV 166 HSP 2 Score: 51.9878 bits (123), Expect = 3.994e-35 Identity = 35/74 (47.30%), Postives = 41/74 (55.41%), Query Frame = 3 Query: 345 IMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNA--------------DAGYAS--DDVLHGSGIGRSRERKRGI 518 IMLFGVRV RKSVS+N+LSQ++ P +N D GYAS D V H S G RERKRG+ Sbjct: 24 IMLFGVRVKVDPMRKSVSLNDLSQYEHPNANNNNNGGDNNESSKVAQDEGYASADDAVQHQSNSG--RERKRGV 95
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.661e-21 Identity = 52/72 (72.22%), Postives = 63/72 (87.50%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVS 826 GVPWTEEEHKLFL+GL+K GKGDWR ISRNFV TRTPTQVASHAQKYF+R+ + + +RR+S+ DITT ++S Sbjct: 131 GVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVNLS 202
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Match: MYBJ_DICDI (Myb-like protein J OS=Dictyostelium discoideum GN=mybJ PE=3 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 6.605e-8 Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 2 Query: 620 WTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYF 754 WT+EEH FL G+Q GKG W+ I++ FV TRTPTQ+ SHAQKY+ Sbjct: 379 WTKEEHIRFLNGIQIHGKGAWKEIAQ-FVGTRTPTQIQSHAQKYY 422
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A0D2R5A7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G371900 PE=4 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 1.560e-82 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 3 Query: 1326 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 1733 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA Sbjct: 171 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 306 HSP 2 Score: 184.496 bits (467), Expect = 2.320e-71 Identity = 101/102 (99.02%), Postives = 102/102 (100.00%), Query Frame = 3 Query: 213 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSGGGEEKGIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRG+ Sbjct: 1 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSGGGEEKGIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGV 102 HSP 3 Score: 114.39 bits (285), Expect = 2.320e-71 Identity = 69/70 (98.57%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTP QVASHAQKYFLRRNNLNRRRRRSSLFDITTDS Sbjct: 101 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPIQVASHAQKYFLRRNNLNRRRRRSSLFDITTDS 170
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A0B0N943_GOSAR (Transcription factor MYB1R1 OS=Gossypium arboreum GN=F383_15785 PE=4 SV=1) HSP 1 Score: 255.373 bits (651), Expect = 2.021e-75 Identity = 129/136 (94.85%), Postives = 130/136 (95.59%), Query Frame = 3 Query: 1326 FINSTILEEDEVAHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 1733 FINSTILEEDEV HQENVSSPQMNGFSMPTTFPATLSLTDLSVTENN S EN ISRPPSPKANTSSY+I PIPVLP PPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA Sbjct: 171 FINSTILEEDEVVHQENVSSPQMNGFSMPTTFPATLSLTDLSVTENNYSTENRISRPPSPKANTSSYLIRPIPVLPVPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAAHSSTLVVMSNGDNNSIISVA 306 HSP 2 Score: 182.57 bits (462), Expect = 1.042e-70 Identity = 98/102 (96.08%), Postives = 99/102 (97.06%), Query Frame = 3 Query: 213 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSG G EKGIMLFGVRVMEGSFRKSVSMNNLSQFDQP VSNADAGYASDDVLHGSGIGRSRERKRG+ Sbjct: 1 MTTSMSRSCSHCGNNGHNSRTCGEVVAGDASNGSGGSGEGGEKGIMLFGVRVMEGSFRKSVSMNNLSQFDQPHVSNADAGYASDDVLHGSGIGRSRERKRGV 102 HSP 3 Score: 114.39 bits (285), Expect = 1.042e-70 Identity = 69/70 (98.57%), Postives = 70/70 (100.00%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820 GVPWTEEEHKLFLLGL+KVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTDS Sbjct: 101 GVPWTEEEHKLFLLGLKKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNLNRRRRRSSLFDITTDS 170
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A061E7E9_THECC (Myb-like transcription factor family protein OS=Theobroma cacao GN=TCM_010118 PE=4 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 8.924e-58 Identity = 73/98 (74.49%), Postives = 76/98 (77.55%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTCGEV G +G IMLFGVRV EGSFRKSVSMNNLSQFDQPQ SNADAGYASDDV+H S GRSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCGEVAGGGGGGENG---------IMLFGVRVTEGSFRKSVSMNNLSQFDQPQDSNADAGYASDDVVHAS--GRSRERKRGV 87 HSP 2 Score: 115.546 bits (288), Expect = 8.924e-58 Identity = 68/70 (97.14%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820 GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTDS Sbjct: 86 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDS 155 HSP 3 Score: 143.28 bits (360), Expect = 9.689e-35 Identity = 96/148 (64.86%), Postives = 105/148 (70.95%), Query Frame = 3 Query: 1326 FINSTILEEDEVAHQENVSSP----------QMNGFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQST--AAAHSSTLVVMSNGDNNSIISVA 1733 F+NSTILEED+V HQENVS P QM+ F M +TFP TLS L V NNS ENL + SP ANTS +I PIP+LP PPSSKMADLNL QK D LPLSLKLSTPSADEQST AAAHSST MS+GD+NSIISVA Sbjct: 156 FMNSTILEEDQV-HQENVSLPLPLPQSQAQAQMSRFPM-STFPVTLSPVVLPVAGENNSMENL-TLGTSPNANTSPKLIRPIPILPVPPSSKMADLNLKQKIPVDPLPLSLKLSTPSADEQSTAAAAAHSSTFQAMSSGDSNSIISVA 300
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A5C631_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0026g01050 PE=4 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 7.494e-53 Identity = 66/99 (66.67%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVV-AGDASNXXXXXXXXXXXXIMLFGVRVMEGSFRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTC E AG A+N IMLFGVR+ EG+FRKS SM NLSQ++QPQ SNADAGYASDDV+H S RSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCTESGGAGAAAND-----------IMLFGVRITEGAFRKSASMTNLSQYEQPQDSNADAGYASDDVVHAS--ARSRERKRGV 86 HSP 2 Score: 112.079 bits (279), Expect = 7.494e-53 Identity = 66/70 (94.29%), Postives = 68/70 (97.14%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820 GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDIT D+ Sbjct: 85 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITADT 154 HSP 3 Score: 94.7449 bits (234), Expect = 5.801e-18 Identity = 67/150 (44.67%), Postives = 89/150 (59.33%), Query Frame = 3 Query: 1326 FINSTILEEDEVAHQENVSSPQMN--------GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEEDRLPLSLKLSTPSADEQSTAAA--HSSTLVVMSNGDNNS----IISVA 1733 F+ STILEED+V HQE VS PQ++ GF +PT FP T++ L V N + + +++ S +A + +I PIP+LP PPSSKMADLNLN + D LPLSLK S+ ++ + A HSS MS N+S IISVA Sbjct: 155 FMGSTILEEDQV-HQETVSPPQLHSHLNGSAGGFPVPT-FPVTMAPVVLPVASNGSME--ILTLGQSNQAKGPTKLIRPIPILPVPPSSKMADLNLNIPSTADPLPLSLKPSSSTSTSPQSPTATRHSSAFQAMSESFNSSTGDNIISVA 300
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: B9S2H1_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_0699450 PE=4 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 1.539e-52 Identity = 72/103 (69.90%), Postives = 76/103 (73.79%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRV-MEG-SFRKSVSMNNLSQFDQPQVSNAD---AGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTCGE G A+ E GIMLFGVRV MEG SFRKSVSMNNLSQ+DQPQ NAD AGY SDDV+H S GRSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCGENSGGSAAG---------ESGIMLFGVRVMMEGASFRKSVSMNNLSQYDQPQDPNADVAAAGYESDDVVHAS--GRSRERKRGV 92 HSP 2 Score: 114.005 bits (284), Expect = 1.539e-52 Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820 GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTD+ Sbjct: 91 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNQNRRRRRSSLFDITTDT 160 HSP 3 Score: 63.929 bits (154), Expect = 1.001e-7 Identity = 55/144 (38.19%), Postives = 74/144 (51.39%), Query Frame = 3 Query: 1326 FINSTILEEDEVAHQENVSS----PQ---------MNGFSMPTTFPATLSLTDLSVT-ENNNSKENL-----------------ISRP-PSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAE--EDRLPLSLKLSTPSADE 1655 F+ STI EE V HQE ++ PQ + GF +TF +LS L V + NNS E+L +S P P PK +I PIP++P SS++ +LNL+Q + E+ LPLSLKLSTPS+DE Sbjct: 161 FLGSTIEEEQVVMHQETATALPLPPQPHLSNNNLGVGGFPK-STFAVSLSPAVLPVKGDINNSMESLSLGPMISIISSSSKAKTLSNPLPPPK------LIRPIPIIPVAASSRIGELNLDQNSPTTEETLPLSLKLSTPSSDE 297
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: W9RHA0_9ROSA (Transcription factor OS=Morus notabilis GN=L484_011012 PE=4 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.607e-52 Identity = 67/99 (67.68%), Postives = 73/99 (73.74%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS-FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSR+CS CGNNGHNSRTC E + G GGG E IMLFGVRV EGS FRKS SM NLSQ+D+ Q SNAD GYASDDV+H S GRSRERKRG+ Sbjct: 1 MSRTCSQCGNNGHNSRTCTEACGDGNGAAAAGGGGGGENAIMLFGVRVTEGSSFRKSASMINLSQYDRAQDSNADTGYASDDVVHAS--GRSRERKRGV 97 HSP 2 Score: 114.775 bits (286), Expect = 9.607e-52 Identity = 67/70 (95.71%), Postives = 69/70 (98.57%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDS 820 GVPWTEEEH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNN NRRRRRSSLFDITTD+ Sbjct: 96 GVPWTEEEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRNNHNRRRRRSSLFDITTDT 165 HSP 3 Score: 83.1889 bits (204), Expect = 4.902e-14 Identity = 60/121 (49.59%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 1413 TTFPATLSLTDLSV-TENNNSKEN--------LISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKAEE--DRLPLSLKLSTPSADEQST---AAAHSSTLVVMSNGDNNSIISVA 1733 +TFP TL+ L + T NS E+ L ++PP P + +I PIP+ P PPSSKMA+LNLN K+ D LPLSLKLSTPS DE+S+ H ST MSNGD SIISVA Sbjct: 211 STFPMTLAPVVLPIATTAENSSESPALDSCVQLAAKPPPP-----TKLIRPIPLHPIPPSSKMANLNLNSKSPTVADPLPLSLKLSTPS-DEKSSPPPPPPHQSTFQAMSNGD--SIISVA 323
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: V4VGV4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032167mg PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.717e-51 Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTC E G +S G IMLFGVRV EGS FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S GRSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93 HSP 2 Score: 110.923 bits (276), Expect = 1.717e-51 Identity = 64/77 (83.12%), Postives = 68/77 (88.31%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSIYKYL 841 GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT S + L Sbjct: 92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTFMGL 168 HSP 3 Score: 98.5969 bits (244), Expect = 4.137e-19 Identity = 70/144 (48.61%), Postives = 86/144 (59.72%), Query Frame = 3 Query: 1344 LEEDEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733 +EE++ QE ++ PQ+N GF + + +P S L VT S ENL P S K TS +I PIP+ P PPSSK+ LNLNQKA + D LPLSLKLSTP S+DEQS HSS MS+GD+NSIISVA Sbjct: 170 MEEEQARQQETITVPLPQPQLNRHPGGFPV-SAYPLKHSAVVLPVT-GQKSMENLTIGP-SNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 310
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A067H574_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021351mg PE=4 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.929e-51 Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTC E G +S G IMLFGVRV EGS FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S GRSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93 HSP 2 Score: 110.923 bits (276), Expect = 1.929e-51 Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSIYKY 838 GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT S ++ Sbjct: 92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTARH 167 HSP 3 Score: 92.0485 bits (227), Expect = 4.960e-17 Identity = 66/141 (46.81%), Postives = 80/141 (56.74%), Query Frame = 3 Query: 1353 DEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733 D HQE ++ PQ+N GF + + +P S L T + I PS K TS +I PIP+ P PPSSK+ LNLNQKA + D LPLSLKLSTP S+DEQS HSS MS+GD+NSIISVA Sbjct: 163 DTARHQETITVPLPQPQLNRHPGGFPV-SAYPVKHSAVVLPFTGEKSMGNLTIG--PSNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 300
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: A0A067GVG8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021351mg PE=4 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 3.195e-51 Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTC E G +S G IMLFGVRV EGS FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S GRSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93 HSP 2 Score: 110.153 bits (274), Expect = 3.195e-51 Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSVSIY 832 GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT S + Sbjct: 92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASSTDTF 165 HSP 3 Score: 98.2117 bits (243), Expect = 5.290e-19 Identity = 70/150 (46.67%), Postives = 88/150 (58.67%), Query Frame = 3 Query: 1326 FINSTILEEDEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733 F+ ST +EE++ HQE ++ PQ+N GF + + +P S L T + I PS K TS +I PIP+ P PPSSK+ LNLNQKA + D LPLSLKLSTP S+DEQS HSS MS+GD+NSIISVA Sbjct: 165 FMGST-MEEEQARHQETITVPLPQPQLNRHPGGFPV-SAYPVKHSAVVLPFTGEKSMGNLTIG--PSNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 310
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Match: V4TEN6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032167mg PE=4 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.341e-51 Identity = 69/100 (69.00%), Postives = 75/100 (75.00%), Query Frame = 3 Query: 225 MSRSCSHCGNNGHNSRTCGEVVAGDASNXXXXXXXXXXXXIMLFGVRVMEGS--FRKSVSMNNLSQFDQPQVSNADAGYASDDVLHGSGIGRSRERKRGI 518 MSRSCS CGNNGHNSRTC E G +S G IMLFGVRV EGS FRKS+SM+NLSQFDQPQ SNADAGYASDD++H S GRSRERKRG+ Sbjct: 1 MSRSCSQCGNNGHNSRTCAEAGGGGSSGAGSEENG-----IMLFGVRVTEGSSSFRKSISMDNLSQFDQPQDSNADAGYASDDIVHAS--GRSRERKRGV 93 HSP 2 Score: 109.383 bits (272), Expect = 4.341e-51 Identity = 63/71 (88.73%), Postives = 66/71 (92.96%), Query Frame = 2 Query: 611 GVPWTEEEHKLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFXXXXXXXXXXXXXXXFDITTDSV 823 GVPWTE+EH+LFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR N N+RRRRSSLFDIT S Sbjct: 92 GVPWTEDEHRLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRFNQNKRRRRSSLFDITASST 162 HSP 3 Score: 101.293 bits (251), Expect = 4.892e-20 Identity = 74/152 (48.68%), Postives = 91/152 (59.87%), Query Frame = 3 Query: 1320 LQFINSTILEEDEVAHQENVS----SPQMN----GFSMPTTFPATLSLTDLSVTENNNSKENLISRPPSPKANTSSYVICPIPVLPAPPSSKMADLNLNQKA---EEDRLPLSLKLSTP--SADEQSTAAAHSS-TLVVMSNGDNNSIISVA 1733 LQF+ T +EE++ QE ++ PQ+N GF + + +P S L VT S ENL P S K TS +I PIP+ P PPSSK+ LNLNQKA + D LPLSLKLSTP S+DEQS HSS MS+GD+NSIISVA Sbjct: 166 LQFMGLT-MEEEQARQQETITVPLPQPQLNRHPGGFPV-SAYPLKHSAVVLPVT-GQKSMENLTIGP-SNKPRTSPKLIRPIPIHPVPPSSKLGGLNLNQKATHVDVDTLPLSLKLSTPSSSSDEQSAQTPHSSAAFQAMSSGDSNSIISVA 313 The following BLAST results are available for this feature:
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-01 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs Swissprot) Total hits: 3
BLAST of g.barbadense_cottongen_reftransV1_0092935 vs. ExPASy TrEMBL
Analysis Date: 2016-11-02 (Homology Analysis for Gossypium barbadense CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pagesback to topSequences
The
following sequences are available for this feature:
contig sequence >g.barbadense_cottongen_reftransV1_0092935 ID=g.barbadense_cottongen_reftransV1_0092935; Name=g.barbadense_cottongen_reftransV1_0092935; organism=Gossypium barbadense; type=contig; length=1925bpback to top |