seed index, qSI.TTT-CSIL_ch06.p2-sy15 (QTL) Gossypium hirsutum

QTL Overview
QTL LabelqSI.TTT-CSIL_ch06.p2-sy15
Published SymbolqSI-Pop2-A6-1
Trait Nameseed index
Trait AliasN/A
Trait StudyTTT-CSIL-2016
PopulationTM-1 x (TX-0256 + TX-1046), CSIL
Female ParentTM-1
Male ParentN/A
Colocalizing MarkerCGR6814
Neighboring MarkerN/A
EnvironmentN/A
LOD3.01
Additivity Dominance RatioN/A
R26.48
Commentspop1=TM-1 x TX-0256, CSIL; pop2=TM-1 x TX-1046, CSIL
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A06chromosomeA06:58296304..58296447 .Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1CottonGen QTL alignment to genome using associated markers
Map Positions
#Map NameLinkage GroupBinChromosomePeakSpan StartSpan StopMapViewer
1TM-1 x (TX-0256 + TX-1046), CSIL (2016)AD_ch06_At.06N/AN/A565161View
Sequences
The following sequences are available for this feature:

QTL from alignment at A06:58296304..58296447

Legend: genetic_marker
Hold the cursor over a type above to highlight its positions in the sequence below.
>qSI.TTT-CSIL_ch06.p2-sy15 ID=qSI.TTT-CSIL_ch06.p2-sy15; Name=seed index; organism=Gossypium hirsutum; type=QTL; length=144bp; location=Sequence derived from: A06:58296304..58296447 (Gossypium hirsutum
CAGCAAGACAGAACGCCATAGTGCACCGCTTACTTATACTCAACCTATGT
CGAGGCAAAAAATCCAGCAAGGTCAGGCATCGGCTTCATCATCATCATCA
TCATCATCATCATCATCATCATCATCTACTGAAGCCTTGTTGAA
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