rna-gnl|WGS_VKGE|Gotom.A04G016300.1, rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1 (mRNA) Gossypium tomentosum
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Transcript Overview
Cross References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1028953794|ref|XP_016720324.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like isoform X2 [Gossypium hirsutum]) HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0 Identity = 421/431 (97.68%), Postives = 421/431 (97.68%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 431
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1028953792|ref|XP_016720323.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like isoform X1 [Gossypium hirsutum]) HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0 Identity = 421/434 (97.00%), Postives = 421/434 (97.00%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL---QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQVTQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 434
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1050570217|ref|XP_017605871.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like isoform X2 [Gossypium arboreum]) HSP 1 Score: 862.062 bits (2226), Expect = 0.000e+0 Identity = 417/431 (96.75%), Postives = 419/431 (97.22%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLS+LSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTK ITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMP+GVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEE SPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSYLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKSITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPIGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEEPSPRRVEIEEDNKGQTKEGSSSRTIEVQE 431
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1050570215|ref|XP_017605869.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like isoform X1 [Gossypium arboreum]) HSP 1 Score: 857.825 bits (2215), Expect = 0.000e+0 Identity = 417/434 (96.08%), Postives = 419/434 (96.54%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL---QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLS+LSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTK ITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMP+GVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEE SPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSYLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKSITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPIGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQVTQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEEPSPRRVEIEEDNKGQTKEGSSSRTIEVQE 434
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|823222296|ref|XP_012443858.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like isoform X2 [Gossypium raimondii] >gi|763795863|gb|KJB62859.1| hypothetical protein B456_009G441600 [Gossypium raimondii]) HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0 Identity = 397/431 (92.11%), Postives = 407/431 (94.43%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFAL+TIFILISLS LSIVVSSSKPLNPCNGDFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLI + GWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCK QPSGIDF VQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHE SLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKP+NITWKWTYNGILVLLGVVVLA EI+TWA+FLYKKCCKKTVEESSPRRVEIEED+KGQT EGSS R EV+E
Sbjct: 1 MQSFALDTIFILISLSSLSIVVSSSKPLNPCNGDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLIASTGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKLQPSGIDFKVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHEASLGNLDSKEVLDLETGDCQNIGQHRRHMRKVHGILNIIGWGTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPDNITWKWTYNGILVLLGVVVLAFEILTWAVFLYKKCCKKTVEESSPRRVEIEEDSKGQTNEGSSPRKTEVEE 431
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|823222294|ref|XP_012443856.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like isoform X1 [Gossypium raimondii]) HSP 1 Score: 774.622 bits (1999), Expect = 0.000e+0 Identity = 397/434 (91.47%), Postives = 407/434 (93.78%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL---QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFAL+TIFILISLS LSIVVSSSKPLNPCNGDFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLI + GWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCK QPSGIDF VQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHE SLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKP+NITWKWTYNGILVLLGVVVLA EI+TWA+FLYKKCCKKTVEESSPRRVEIEED+KGQT EGSS R EV+E
Sbjct: 1 MQSFALDTIFILISLSSLSIVVSSSKPLNPCNGDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLIASTGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKLQPSGIDFKVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHEASLGNLDSKEVLDLETGDCQNIGQHRRHMRKVHGILNIIGWGTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQVTQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPDNITWKWTYNGILVLLGVVVLAFEILTWAVFLYKKCCKKTVEESSPRRVEIEEDSKGQTNEGSSPRKTEVEE 434
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1347711801|gb|PPS09019.1| (hypothetical protein GOBAR_AA11617 [Gossypium barbadense]) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 367/440 (83.41%), Postives = 372/440 (84.55%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKY--YTFHSHRVLGICIFGF-------TTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMT VDDKDVG YNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMPLGVIVARYFKQFPIKLDPCWY F V +L T+ L L + S T S R F F + ILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCC+KT EESSPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTGVDDKDVG-------------YNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPLGVIVARYFKQFPIKLDPCWYTF----ITVAKLLVTSLEPLAGDLDYSSDMNPNTIPSIRTAS-SAFAFSGSLPCKSVNWILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCRKTAEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 422
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1344105302|gb|PPD79319.1| (hypothetical protein GOBAR_DD23760 [Gossypium barbadense]) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 342/403 (84.86%), Postives = 350/403 (86.85%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKGTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEED 403
MQSFAL+TIFILISLS LSIVVSSSKPLNPCN DFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLIT GWLAWGINPDLPRMVGTRAIIAVKVP+QITPSVNTYNITKDIQLGCK QPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHV G IG GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKP+NITWKWTYNGILVLLGVVVLA EI+TWA+FLYKKCCKKTVEESSPRRVEIEED
Sbjct: 1 MQSFALSTIFILISLSSLSIVVSSSKPLNPCNDDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITTTGWLAWGINPDLPRMVGTRAIIAVKVPSQITPSVNTYNITKDIQLGCKLQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHV-------------------------------HGILNIIGW-------GTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPDNITWKWTYNGILVLLGVVVLAFEILTWAVFLYKKCCKKTVEESSPRRVEIEED 365
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1029041392|ref|XP_016684503.1| (PREDICTED: cytochrome b561 and DOMON domain-containing protein At4g12980-like [Gossypium hirsutum]) HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0 Identity = 306/333 (91.89%), Postives = 315/333 (94.59%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNV 323
MQSFAL+TIFILISLS LS+VVSSSKPLNPCNGDFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGC+ QPSGIDFMVQN TVVDDKDVGFF VF+TLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHE SLGNLDSKEVL+LETGDCQNIGQHRRHMRK GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYR+HWNV
Sbjct: 1 MQSFALDTIFILISLSSLSVVVSSSKPLNPCNGDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCRLQPSGIDFMVQNTTVVDDKDVGFFYVFSTLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHEASLGNLDSKEVLNLETGDCQNIGQHRRHMRKVHGILNIIGWGTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRRHWNV 333
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Match: gi|1204911723|ref|XP_021288411.1| (cytochrome b561 and DOMON domain-containing protein At4g12980-like [Herrania umbratica]) HSP 1 Score: 539.65 bits (1389), Expect = 0.000e+0 Identity = 258/431 (59.86%), Postives = 323/431 (74.94%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQS L IFIL +L L SSK + C+ DFLH AY M ++ + T C+KL++LQAQFAWN+++TS NQTQ+NILIGTK+IT+ GWLAWG+NPDLP+MVGTRAII +K PN +P VNTYNITKD +L C QPS I VQN T GFF++ AT++LP+ YNVSSLNHVWQVGY +G EP+MH +L N DS+E+LDL +G CQNIG + RH+RK GTLMP+GVI+ARYF+ +P +L+ W+ FHY CQ +GYILG+ GWGLGLFLGHESKYYTF++HRVLGICIFGF TLQ+LAF+ KPT++DEYRKHWNVYHHFLGY+LLVMIPVNIY+GIK+LKP+N TWKW YNGILVLL +VVLALE+ TW FLY K + ++P ++ ++G G+S + + Q+
Sbjct: 1 MQSSTLPVIFIL-ALFCLPYAAFSSKSSHQCSDDFLHLDAYLGM-DERHDTRCRKLTTLQAQFAWNFYRTSQNQTQVNILIGTKMITDAGWLAWGVNPDLPQMVGTRAIIGIKPPNGSSPFVNTYNITKDTKLYCSIQPSDIGLRVQNKTAEHVTKTGFFTISATVILPESYNVSSLNHVWQVGYVAEGFEPRMHSKTLQNFDSREILDLNSGQCQNIGHNSRHLRKIHGILNIIGWGTLMPIGVIIARYFRVYPFRLESWWFTFHYSCQALGYILGSFGWGLGLFLGHESKYYTFYTHRVLGICIFGFATLQMLAFRLKPTKDDEYRKHWNVYHHFLGYSLLVMIPVNIYQGIKILKPDNTTWKWAYNGILVLLAMVVLALEVYTWTKFLYNKKGQPRHGNATPSDQAPQKTDQG---SGTSPQADQTQQ 426
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A1U8M456_GOSHI (Cytochrome b561 and DOMON domain-containing protein OS=Gossypium hirsutum OX=3635 GN=LOC107932747 PE=4 SV=1) HSP 1 Score: 870.152 bits (2247), Expect = 0.000e+0 Identity = 421/431 (97.68%), Postives = 421/431 (97.68%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 431
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A1U8M3V9_GOSHI (Cytochrome b561 and DOMON domain-containing protein OS=Gossypium hirsutum OX=3635 GN=LOC107932747 PE=4 SV=1) HSP 1 Score: 865.914 bits (2236), Expect = 0.000e+0 Identity = 421/434 (97.00%), Postives = 421/434 (97.00%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL---QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTL QILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQVTQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 434
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A0D2U1I1_GOSRA (Cytochrome b561 and DOMON domain-containing protein OS=Gossypium raimondii OX=29730 GN=B456_009G441600 PE=4 SV=1) HSP 1 Score: 779.63 bits (2012), Expect = 0.000e+0 Identity = 397/431 (92.11%), Postives = 407/431 (94.43%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFAL+TIFILISLS LSIVVSSSKPLNPCNGDFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLI + GWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCK QPSGIDF VQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHE SLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKP+NITWKWTYNGILVLLGVVVLA EI+TWA+FLYKKCCKKTVEESSPRRVEIEED+KGQT EGSS R EV+E
Sbjct: 1 MQSFALDTIFILISLSSLSIVVSSSKPLNPCNGDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLIASTGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKLQPSGIDFKVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHEASLGNLDSKEVLDLETGDCQNIGQHRRHMRKVHGILNIIGWGTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPDNITWKWTYNGILVLLGVVVLAFEILTWAVFLYKKCCKKTVEESSPRRVEIEEDSKGQTNEGSSPRKTEVEE 431
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A2P5Y086_GOSBA (Cytochrome b561 and DOMON domain-containing protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11617 PE=4 SV=1) HSP 1 Score: 689.878 bits (1779), Expect = 0.000e+0 Identity = 367/440 (83.41%), Postives = 372/440 (84.55%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKY--YTFHSHRVLGICIFGF-------TTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 421
MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMT VDDKDVG YNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK GTLMPLGVIVARYFKQFPIKLDPCWY F V +L T+ L L + S T S R F F + ILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCC+KT EESSPRRVEIEEDNKGQTKEGSSSRTIEVQE
Sbjct: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTGVDDKDVG-------------YNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKIHGILNIIGWGTLMPLGVIVARYFKQFPIKLDPCWYTF----ITVAKLLVTSLEPLAGDLDYSSDMNPNTIPSIRTAS-SAFAFSGSLPCKSVNWILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCRKTAEESSPRRVEIEEDNKGQTKEGSSSRTIEVQE 422
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A2P5QXN7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD23760 PE=4 SV=1) HSP 1 Score: 640.188 bits (1650), Expect = 0.000e+0 Identity = 342/403 (84.86%), Postives = 350/403 (86.85%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRKGTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESSPRRVEIEED 403
MQSFAL+TIFILISLS LSIVVSSSKPLNPCN DFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLIT GWLAWGINPDLPRMVGTRAIIAVKVP+QITPSVNTYNITKDIQLGCK QPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHV G IG GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKP+NITWKWTYNGILVLLGVVVLA EI+TWA+FLYKKCCKKTVEESSPRRVEIEED
Sbjct: 1 MQSFALSTIFILISLSSLSIVVSSSKPLNPCNDDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITTTGWLAWGINPDLPRMVGTRAIIAVKVPSQITPSVNTYNITKDIQLGCKLQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHV-------------------------------HGILNIIGW-------GTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPDNITWKWTYNGILVLLGVVVLAFEILTWAVFLYKKCCKKTVEESSPRRVEIEED 365
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A1U8J7A2_GOSHI (cytochrome b561 and DOMON domain-containing protein At4g12980-like OS=Gossypium hirsutum OX=3635 GN=LOC107902906 PE=4 SV=1) HSP 1 Score: 612.838 bits (1579), Expect = 0.000e+0 Identity = 306/333 (91.89%), Postives = 315/333 (94.59%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNV 323
MQSFAL+TIFILISLS LS+VVSSSKPLNPCNGDFLH QAY+QMQNQTNTT CKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGC+ QPSGIDFMVQN TVVDDKDVGFF VF+TLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHE SLGNLDSKEVL+LETGDCQNIGQHRRHMRK GTL+P+GVIVARYFKQFPIKLDPCWYYFHY CQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYR+HWNV
Sbjct: 1 MQSFALDTIFILISLSSLSVVVSSSKPLNPCNGDFLHIQAYKQMQNQTNTTQCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCRLQPSGIDFMVQNTTVVDDKDVGFFYVFSTLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHEASLGNLDSKEVLNLETGDCQNIGQHRRHMRKVHGILNIIGWGTLLPIGVIVARYFKQFPIKLDPCWYYFHYSCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRRHWNV 333
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A061FCR3_THECC (Auxin-responsive family protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_030829 PE=4 SV=1) HSP 1 Score: 511.146 bits (1315), Expect = 2.785e-177 Identity = 264/440 (60.00%), Postives = 328/440 (74.55%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKK---CCKKTVEES--SPRRVEIEE--DNKG-----QTKEGSSSRTIE 418
MQS L I IL +L L SK + C+ DFLH +AY M N+ +T C+KL++LQAQFAWN+++TSHNQTQ+NILIGTK+IT+ GWLAWG+NPDLP+MVGTRAIIA+K PN +P VNTYNITKD +L C QPS I VQN T GFF++ ATL+LP+ YN+S LNHVWQVGY +G EP +H +L N DS+E+LDL TG CQNIG +RR +RK GTLMP+GVI+ARYF+ +P KL+ W+ FHY CQ +GYILG+ GWGLGL LGHESKYYTF++HRVLGICIFGF TLQ+LAF+ KPT++DEYRKHWNVYHHFLGY+LLVMIPVNIY+GI++LKP+N TWKW YNGILVLL +VVLALE+ TW FLY++ +KT + S SP+ + ++ DNKG QT + +S + I
Sbjct: 1 MQSSTLPVIVIL-ALFSLPYAAFGSKSSHLCSDDFLHLEAYVGM-NERQSTSCRKLTTLQAQFAWNFYRTSHNQTQVNILIGTKMITDAGWLAWGVNPDLPQMVGTRAIIAIKPPNGSSPFVNTYNITKDTKLYCSIQPSDIGLRVQNKTAQHITGTGFFTISATLILPESYNISRLNHVWQVGYVAEGFEPMVHSKTLQNFDSREILDLNTGQCQNIGHNRRRLRKIHGILNIIGWGTLMPIGVIIARYFRLYPFKLESWWFTFHYSCQALGYILGSFGWGLGLLLGHESKYYTFYTHRVLGICIFGFATLQMLAFRLKPTKDDEYRKHWNVYHHFLGYSLLVMIPVNIYQGIQILKPDNTTWKWAYNGILVLLAMVVLALEVYTWTKFLYQRKGQARQKTGQGSGTSPQADQTQQKTDNKGSATSPQTDQDTSKQPIS 438
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A061F4M2_THECC (Auxin-responsive family protein, putative isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_030829 PE=4 SV=1) HSP 1 Score: 506.523 bits (1303), Expect = 2.052e-175 Identity = 264/443 (59.59%), Postives = 328/443 (74.04%), Query Frame = 0
Query: 1 MQSFALNTIFILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQI---LAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKK---CCKKTVEES--SPRRVEIEE--DNKG-----QTKEGSSSRTIE 418
MQS L I IL +L L SK + C+ DFLH +AY M N+ +T C+KL++LQAQFAWN+++TSHNQTQ+NILIGTK+IT+ GWLAWG+NPDLP+MVGTRAIIA+K PN +P VNTYNITKD +L C QPS I VQN T GFF++ ATL+LP+ YN+S LNHVWQVGY +G EP +H +L N DS+E+LDL TG CQNIG +RR +RK GTLMP+GVI+ARYF+ +P KL+ W+ FHY CQ +GYILG+ GWGLGL LGHESKYYTF++HRVLGICIFGF TLQ+ LAF+ KPT++DEYRKHWNVYHHFLGY+LLVMIPVNIY+GI++LKP+N TWKW YNGILVLL +VVLALE+ TW FLY++ +KT + S SP+ + ++ DNKG QT + +S + I
Sbjct: 1 MQSSTLPVIVIL-ALFSLPYAAFGSKSSHLCSDDFLHLEAYVGM-NERQSTSCRKLTTLQAQFAWNFYRTSHNQTQVNILIGTKMITDAGWLAWGVNPDLPQMVGTRAIIAIKPPNGSSPFVNTYNITKDTKLYCSIQPSDIGLRVQNKTAQHITGTGFFTISATLILPESYNISRLNHVWQVGYVAEGFEPMVHSKTLQNFDSREILDLNTGQCQNIGHNRRRLRKIHGILNIIGWGTLMPIGVIIARYFRLYPFKLESWWFTFHYSCQALGYILGSFGWGLGLLLGHESKYYTFYTHRVLGICIFGFATLQVTQMLAFRLKPTKDDEYRKHWNVYHHFLGYSLLVMIPVNIYQGIQILKPDNTTWKWAYNGILVLLAMVVLALEVYTWTKFLYQRKGQARQKTGQGSGTSPQADQTQQKTDNKGSATSPQTDQDTSKQPIS 441
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A1R3KM60_COCAP (Cytochrome b561 and DOMON domain-containing protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_01152 PE=4 SV=1) HSP 1 Score: 472.626 bits (1215), Expect = 5.274e-163 Identity = 236/352 (67.05%), Postives = 282/352 (80.11%), Query Frame = 0
Query: 46 NQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMGWLAWGINPDLPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDLETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCK 387
++ NTT CKKL++LQAQFAWNY+ N+T +NILIG+K++ MGWLAWG+NPDLP+MVGTRAIIA+ +PN P VNTYNIT D +L C+ PS I+ V N T + GFF++FA+LVLP+ YN+SSLNHVWQVGY DGLEPKMH T+L N DSKE LDL+TG CQNIG +R+H+RK GTL+P+GVI+ARY ++FP KLD W+ HY CQ +GYILG+ GWGLGL LGHESKYY F HR+LGICIFGFTTLQ+LAF+ KP +EDEYRKHWNVYHHFLGY+LLVMIPVNIY+GIK+LKP+N TWKW YNGILVLLG+VVLALEI TWA FL+KK K
Sbjct: 2 SKANTTKCKKLTTLQAQFAWNYY----NKTFINILIGSKMVPEMGWLAWGVNPDLPQMVGTRAIIAINLPNGSAP-VNTYNITIDTKLRCRLNPSDIEVRVLNKTAMYIPKTGFFTMFASLVLPESYNISSLNHVWQVGYLADGLEPKMHSTTLQNFDSKETLDLKTGRCQNIGHNRQHLRKIHGILNMMGWGTLLPIGVIIARYLREFPFKLDTWWFTLHYSCQALGYILGSIGWGLGLLLGHESKYYCFRPHRLLGICIFGFTTLQMLAFRLKPAREDEYRKHWNVYHHFLGYSLLVMIPVNIYQGIKILKPDNRTWKWAYNGILVLLGMVVLALEIYTWAKFLWKKYRK 348
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Match: A0A067FF46_CITSI (Cytochrome b561 and DOMON domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g015790mg PE=4 SV=1) HSP 1 Score: 366.696 bits (940), Expect = 3.852e-121 Identity = 183/399 (45.86%), Postives = 266/399 (66.67%), Query Frame = 0
Query: 11 ILISLSHLSIVVSSSKPLNPCNGDFLHTQAYRQMQNQTNTTHCKKLSSLQAQFAWNYHKTSHNQTQLNILIGTKLITNMG-WLAWGINPD-LPRMVGTRAIIAVKVPNQITPSVNTYNITKDIQLGCKFQPSGIDFMVQNMTVVDDKDVGFFSVFATLVLPQRYNVSSLNHVWQVGYCVDGLEPKMHETSLGNLDSKEVLDL---ETGDCQNIGQHRRHMRK----------GTLMPLGVIVARYFKQFPIKLDPCWYYFHYCCQVVGYILGTAGWGLGLFLGHESKYYTFHSHRVLGICIFGFTTLQILAFQFKPTQEDEYRKHWNVYHHFLGYALLVMIPVNIYKGIKLLKPNNITWKWTYNGILVLLGVVVLALEIVTWAIFLYKKCCKKTVEESS 394
+++ L+ S++ +S + C+ +FL Q++ + N T CKKL +L A+FAWNY+ + +T ++IL G +L ++ G WLAWG+NP+ P+MVGTRA+I ++ PN T ++ TYNIT D +LGCK QPS ID V + + +F++ ATL+LP YN+S LNHVWQVGY D ++PK H +L N+DS E ++L ET C IG+HRRH+R GT +P+GVI+ARY++ +P K W++FH CQ++GY LG+ GW +GL LG SK+Y+F +HR+L I IF FTTLQ+LA + KP ++DEYRK W++YHHFLGYALL +I VNI++GI +LKP+ + WKW Y G+L +L +V L E +W F+ K K + + +S
Sbjct: 10 VILILALFSVLSTSISQFSTCSDEFL------QLKREKNITFCKKLPTLGAEFAWNYYD-NQTETHIDILFGARLPSDTGSWLAWGVNPNQSPQMVGTRALIGIRQPNG-TLALGTYNITADTKLGCKLQPSRIDVTVVSKHTEYVSSLDYFAITATLILPPEYNISRLNHVWQVGYDSDEMQPKKHRANLPNVDSTETINLKNQETTCC--IGKHRRHLRTVHGILNILGWGTFLPIGVIIARYYRVYPNKF-AWWFHFHVSCQIIGYTLGSIGWIIGLGLGRASKHYSFQTHRLLAIFIFTFTTLQMLALRLKPKRKDEYRKFWDMYHHFLGYALLALISVNIFEGIAILKPHQLVWKWAYIGLLGILAIVTLGFETYSWCKFISDKKKKASGQPTS 397 The following BLAST results are available for this feature:
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. NCBI nr
Analysis Date: 2020-01-11 (BLASTP of HGS_v1.1 Gossypium tomentosum proteins vs NCBI nr) Total hits: 10
BLAST of rna-gnl|WGS_VKGE|Gotom.A04G016300.1 vs. ExPASy TrEMBL
Analysis Date: 2020-01-15 (BLASTP of HGS_v1.1 Gossypium tomentosum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan Analysis for HGS_v1.1 Gossypium tomentosum proteins
Date Performed: 2020-01-13
Sequences
The
following sequences are available for this feature:
protein sequence of rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1 >rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1 ID=rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1; Name=rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1; organism=Gossypium tomentosum; type=polypeptide; length=421bpback to top mRNA from alignment at CM017613.1:1750170..1753821- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1 ID=rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1; Name=rna-gnl|WGS_VKGE|Gotom.A04G016300.1; organism=Gossypium tomentosum; type=mRNA; length=3652bp; location=Sequence derived from: CM017613.1:1750170..1753821- (Gossypium tomentosumback to top Coding sequence (CDS) from alignment at CM017613.1:1750170..1753821- >rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1 ID=rna-gnl|WGS_VKGE|Gotom.A04G016300.1_HGS-AD3_v1.1; Name=rna-gnl|WGS_VKGE|Gotom.A04G016300.1; organism=Gossypium tomentosum; type=CDS; length=1266bp; location=Sequence derived from: CM017613.1:1750170..1753821- (Gossypium tomentosumback to top |