D5.v1.pred_00004509-RA, D5.v1.pred_00004509-RA_BYU-D5_v1.a1 (mRNA) Gossypium raimondii
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Transcript Overview
Cross References
External references for this mRNA
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: CF9_SOLPI (Receptor-like protein Cf-9 OS=Solanum pimpinellifolium OX=4084 GN=CF-9 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 9.781e-12 Identity = 53/153 (34.64%), Postives = 83/153 (54.25%), Query Frame = 0
Query: 144 PNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNR------NLSLDLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSL 290
P F +L+S + L +G C+L G + + + N+ L+LG N + ++ K + +L N G + N TQLE L ++ NSL GPIP ++ NL L LS+ N + SW+++ SL+E+ LS N FS I+EF+SK+L
Sbjct: 282 PKSFSHLTS-LHELYMGRCNLSGPIPKPLWNLTNIVFLHLGDNHLEGPISHFTI-FEKLKRLSLVNNNFDGGLEFLSFN-TQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTL 431
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: 9DC3_SOLPI (Receptor-like protein 9DC3 OS=Solanum pimpinellifolium OX=4084 GN=9DC3 PE=3 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 4.199e-10 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 144 PNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNR-NLSLDLLKFYQ-----SNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSL 290
P F +L+S + L +G +L G + + + N+ L+L YN + L ++ S + L G + N TQLE L ++ NSL GPIP ++ NL L LS+ N + SW+++ SL+E+ LS N FS I+EF+SK+L
Sbjct: 281 PESFSHLTS-LHELDMGYTNLSGPIPKPLWNLTNIESLDLRYNHLEGPIPQLPIFEKLKKLSLFRNDNLDGGLEFLSFN-TQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTL 431
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: 9DC2_SOLPI (Receptor-like protein 9DC2 OS=Solanum pimpinellifolium OX=4084 GN=9DC2 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 4.643e-10 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 144 PNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNR-NLSLDLLKFYQ-----SNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSL 290
P F +L+S + L +G +L G + + + N+ L+L YN + L ++ S + L G + N TQLE L ++ NSL GPIP ++ NL L LS+ N + SW+++ SL+E+ LS N FS I+EF+SK+L
Sbjct: 281 PESFSHLTS-LHELDMGYTNLSGPIPKPLWNLTNIESLDLRYNHLEGPIPQLPIFEKLKKLSLFRNDNLDGGLEFLSFN-TQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTL 431
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: 9DC1_SOLPI (Receptor-like protein 9DC1 OS=Solanum pimpinellifolium OX=4084 GN=9DC1 PE=3 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 4.643e-10 Identity = 52/153 (33.99%), Postives = 81/153 (52.94%), Query Frame = 0
Query: 144 PNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNR-NLSLDLLKFYQ-----SNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSL 290
P F +L+S + L +G +L G + + + N+ L+L YN + L ++ S + L G + N TQLE L ++ NSL GPIP ++ NL L LS+ N + SW+++ SL+E+ LS N FS I+EF+SK+L
Sbjct: 281 PESFSHLTS-LHELDMGYTNLSGPIPKPLWNLTNIESLDLRYNHLEGPIPQLPIFEKLKKLSLFRNDNLDGGLEFLSFN-TQLERLDLSSNSLTGPIPSNISGLQNLECLYLSSNHLNGSIPSWIFSLPSLVELDLSNNTFSGKIQEFKSKTL 431
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: CF0_SOLLC (Receptor-like protein Cf-9 homolog OS=Solanum lycopersicum OX=4081 GN=HCR9-0 PE=2 SV=2) HSP 1 Score: 60.077 bits (144), Expect = 8.151e-9 Identity = 54/155 (34.84%), Postives = 80/155 (51.61%), Query Frame = 0
Query: 144 PNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNR------NLSLDLLKFYQSNLSWNQLSGQVSLSIVNL--TQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSL 290
P F +L+S + +L +G C+L G + + + N+ L LG N L+ K + +L N L G + N TQLE L + N L GPIP V+ NL L LS+ N + SW+++ SL+ + LS N FS I+EF+SK+L
Sbjct: 261 PESFSHLTS-LHALYMGRCNLSGHIPKPLWNLTNIESLFLGDNHLEGPIPQLT-RFEKLKRLSLGNNNLHGGLEFLSFNRSWTQLEILYFSSNYLTGPIPSNVSGLQNLGWLFLSSNHLNGSIPSWIFSLPSLVVLDLSNNTFSGKIQEFKSKTL 413
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: RLP7_ARATH (Receptor-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=RLP7 PE=3 SV=2) HSP 1 Score: 56.9954 bits (136), Expect = 7.038e-8 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 0
Query: 125 LRNLSEQSSDLVIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLS 250
LRNL E V I I P F N+ S ++SL+L GC+L G+F +IL PNL ++LG N NL +L F+++N L L I S G IPD +++ NL SL LS
Sbjct: 181 LRNLRELDMSYVKISSEI-PEEFSNIRS-LRSLNLNGCNLFGEFPSSILLIPNLQSIDLGNNPNLRGNLPVFHENN------------------SLLKLTILYTSFSGAIPDSISSLKNLTSLTLS 286
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Match: MSL1_ORYSJ (Leucine-rich repeat receptor protein kinase MSL1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSL1 PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.518e-7 Identity = 32/85 (37.65%), Postives = 50/85 (58.82%), Query Frame = 0
Query: 200 NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKE 284
+LS NQL+G ++ SI L L+ L I N L+GP+P + A NL +L LS + +E + L+N +L+ + LS N + HI +
Sbjct: 620 SLSDNQLTGMITESIGKLLSLQSLSIDRNYLQGPLPRSIGALRNLTALSLSGNMLSEDIPIQLFNCRNLVTLDLSCNNLTGHIPK 704
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT5G55600.3 (| Agenet and bromo-adjacent homology (BAH) domain-containing protein | Chr5:22522232-22524796 REVERSE LENGTH=663 | 201606) HSP 1 Score: 128.642 bits (322), Expect = 4.203e-33 Identity = 59/88 (67.05%), Postives = 71/88 (80.68%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMI 87
M N H F EW+E F+SQE GN VV YFLKDS ES+ AVIG++RS+R MFYVV+EEFVR++ +NS H+GFKWRSRREVVDW TSM+
Sbjct: 1 MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSML 88
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT5G55600.2 (| Agenet and bromo-adjacent homology (BAH) domain-containing protein | Chr5:22522232-22524796 REVERSE LENGTH=663 | 201606) HSP 1 Score: 128.642 bits (322), Expect = 4.203e-33 Identity = 59/88 (67.05%), Postives = 71/88 (80.68%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMI 87
M N H F EW+E F+SQE GN VV YFLKDS ES+ AVIG++RS+R MFYVV+EEFVR++ +NS H+GFKWRSRREVVDW TSM+
Sbjct: 1 MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSML 88
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT5G55600.1 (| Agenet and bromo-adjacent homology (BAH) domain-containing protein | Chr5:22522232-22524796 REVERSE LENGTH=663 | 201606) HSP 1 Score: 128.642 bits (322), Expect = 4.203e-33 Identity = 59/88 (67.05%), Postives = 71/88 (80.68%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMI 87
M N H F EW+E F+SQE GN VV YFLKDS ES+ AVIG++RS+R MFYVV+EEFVR++ +NS H+GFKWRSRREVVDW TSM+
Sbjct: 1 MCENDHHFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVIGTERSVRHMFYVVSEEFVRIHGPENSIHSGFKWRSRREVVDWLTSML 88
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT5G23400.1 (| Leucine-rich repeat (LRR) family protein | Chr5:7880603-7882372 FORWARD LENGTH=589 | 201606) HSP 1 Score: 60.077 bits (144), Expect = 7.770e-10 Identity = 72/268 (26.87%), Postives = 120/268 (44.78%), Query Frame = 0
Query: 49 MFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDR--VIETWHAASFVFPDC------------AMSEI------SALKAPALDNMGYLLRNLSE-QSSDLVII-----MPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSL------DLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKE 284
M + VR + +S + R ++ + +S+I D V+++W V DC A ++ SA+ P L G L +L +S +L++I + PN F NL+S ++ L L LQG ++ H P L +L+L NR L L + NL+ N SG + ++ NL +LE+L ++ N L GPIPD + F NL +L LS+ + L +Y+ L + L +N + + +
Sbjct: 9 MNLLFVSALVRNFVLSSSQQVICSSQDRATLLGFKSSIIEDTTGVLDSW-----VGKDCCNGDWEGVQCNPATGKVTGLVLQSAVNEPTLYMKGTLSPSLGNLRSLELLLITGNKFITGSIPNSFSNLTS-LRQLILDDNSLQGNVLSSLGHLPLLEILSLAGNRFSGLVPASFGSLRRLTTMNLARNSFSGPIPVTFKNLLKLENLDLSSNLLSGPIPDFIGQFQNLTNLYLSSNRFSGVLPVSVYSLRKLQTMSLERNGLTGPLSD 270
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT1G47890.1 (| receptor like protein 7 | Chr1:17643976-17647035 FORWARD LENGTH=1019 | 201606) HSP 1 Score: 57.3806 bits (137), Expect = 5.476e-9 Identity = 47/126 (37.30%), Postives = 63/126 (50.00%), Query Frame = 0
Query: 125 LRNLSEQSSDLVIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLS 250
LRNL E V I I P F N+ S ++SL+L GC+L G+F +IL PNL ++LG N NL +L F+++N L L I S G IPD +++ NL SL LS
Sbjct: 226 LRNLRELDMSYVKISSEI-PEEFSNIRS-LRSLNLNGCNLFGEFPSSILLIPNLQSIDLGNNPNLRGNLPVFHENN------------------SLLKLTILYTSFSGAIPDSISSLKNLTSLTLS 331
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT3G11010.3 (| receptor like protein 34 | Chr3:3450988-3453861 REVERSE LENGTH=933 | 201606) HSP 1 Score: 55.4546 bits (132), Expect = 2.833e-8 Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 0
Query: 163 DLQGKFSRNILHSPNLNLLNLGYNR------NLSLDLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHI 282
D +G+ + +I + +L L+L YNR N +L + +LS+NQ SGQ+ SI NL+ L L ++ N G P + NL +L LS + ++ S + N S L+ +YLS N F I
Sbjct: 132 DFEGQITSSIENLSHLTSLDLSYNRFSGQILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFYGEI 257
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT3G11010.5 (| receptor like protein 34 | Chr3:3450988-3453672 REVERSE LENGTH=870 | 201606) HSP 1 Score: 55.0694 bits (131), Expect = 3.688e-8 Identity = 42/126 (33.33%), Postives = 65/126 (51.59%), Query Frame = 0
Query: 163 DLQGKFSRNILHSPNLNLLNLGYNR------NLSLDLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHI 282
D +G+ + +I + +L L+L YNR N +L + +LS+NQ SGQ+ SI NL+ L L ++ N G P + NL +L LS + ++ S + N S L+ +YLS N F I
Sbjct: 69 DFEGQITSSIENLSHLTSLDLSYNRFSGQILNSIGNLSRLTSLDLSFNQFSGQIPSSIGNLSHLTFLGLSGNRFFGQFPSSIGGLSNLTNLHLSYNKYSGQIPSSIGNLSQLIVLYLSVNNFYGEI 194
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT2G13800.3 (| somatic embryogenesis receptor-like kinase 5 | Chr2:5753276-5757065 FORWARD LENGTH=601 | 201606) HSP 1 Score: 53.1434 bits (126), Expect = 1.094e-7 Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 0
Query: 145 NVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSL-------DLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSN 251
+V N +S+ L LG +L G+ + PNL L L +N N++ DL++ +L N +SG + S+ L +L LR+ NSL G IP + A P L LD+SN
Sbjct: 63 HVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLEL-FNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISN 174
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT2G13800.1 (| somatic embryogenesis receptor-like kinase 5 | Chr2:5753276-5757065 FORWARD LENGTH=601 | 201606) HSP 1 Score: 53.1434 bits (126), Expect = 1.094e-7 Identity = 39/114 (34.21%), Postives = 58/114 (50.88%), Query Frame = 0
Query: 145 NVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSL-------DLLKFYQSNLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSN 251
+V N +S+ L LG +L G+ + PNL L L +N N++ DL++ +L N +SG + S+ L +L LR+ NSL G IP + A P L LD+SN
Sbjct: 63 HVTCNTENSVTRLDLGSANLSGELVPQLAQLPNLQYLEL-FNNNITGEIPEELGDLMELVSLDLFANNISGPIPSSLGKLGKLRFLRLYNNSLSGEIPRSLTALP-LDVLDISN 174
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Match: AT3G51740.1 (| inflorescence meristem receptor-like kinase 2 | Chr3:19189248-19191842 FORWARD LENGTH=836 | 201606) HSP 1 Score: 52.7582 bits (125), Expect = 1.847e-7 Identity = 51/169 (30.18%), Postives = 76/169 (44.97%), Query Frame = 0
Query: 124 LLRNLSEQSSDLVIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQS--------NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKE 284
LL+NL S+ L +P + S+ + L+L L G ++ S L L+L +N NLS + F+ + NL N+ SG V +S+ + LE + I+ N L G IP E P+L SLD S N + N SSL+ + L N I +
Sbjct: 167 LLQNLDLSSNQLTGAIPP-----SLTESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHN-NLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPD 329
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A1U8LX54_GOSHI (uncharacterized protein LOC107902905 OS=Gossypium hirsutum OX=3635 GN=LOC107931738 PE=4 SV=1) HSP 1 Score: 268.085 bits (684), Expect = 3.175e-88 Identity = 124/136 (91.18%), Postives = 129/136 (94.85%), Query Frame = 0
Query: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCFEWQEEFIS ECGNCVVQYFLKDSTSESVCAVIGSQRS+RQMFYVVAEEFVR YAA+NSNHAGF+WRSRREVVDW TSMIYDRV ETWHAASF FPDCAM EISALKA ALDNMGYLLRNL+EQSSD+V
Sbjct: 1 MSGNGHCFEWQEEFISLECGNCVVQYFLKDSTSESVCAVIGSQRSVRQMFYVVAEEFVREYAAENSNHAGFEWRSRREVVDWLTSMIYDRVTETWHAASFAFPDCAMIEISALKAQALDNMGYLLRNLTEQSSDIV 136
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A2P5QNC2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD27023 PE=4 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.322e-72 Identity = 111/131 (84.73%), Postives = 114/131 (87.02%), Query Frame = 0
Query: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQ 131
MSGNGHCFEWQEEFISQ+CGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAA+NSNHAGFKWRSRREVVDWFT+MIY FVFPDCAMSEISALKAPALDNM Y L L Q
Sbjct: 1 MSGNGHCFEWQEEFISQDCGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAENSNHAGFKWRSRREVVDWFTAMIY-----------FVFPDCAMSEISALKAPALDNMVYYLDFLLVQ 120
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A0D2QYR0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G448700 PE=4 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 1.308e-62 Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 27 FLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRRE-VVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
F DSTSESVCAVIGSQRS+R MFYVVAEEFVRVYAA+NSNHAGFKWRSRRE VVDW TSMIYDRV ETWHAASF FPDCAM EISALKA ALDNMGYLLRNL+EQSSD+V
Sbjct: 16 FSYDSTSESVCAVIGSQRSVRYMFYVVAEEFVRVYAAENSNHAGFKWRSRREEVVDWLTSMIYDRVTETWHAASFAFPDCAMIEISALKAQALDNMGYLLRNLTEQSSDIV 126
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A2P5PWR6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36390 PE=4 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.788e-57 Identity = 131/207 (63.29%), Postives = 136/207 (65.70%), Query Frame = 0
Query: 139 MPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPN-------------LNLLNLGYNRNLS-LDL---------------------LKFYQSNL-------------------SWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
MPSINPNVF+NLSSSIKSLSLGGCDLQGKFSRN+LHSPN L+LL + NL LDL L SNL SWNQLS QV LSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSN LPN KLLSWLYNA SLME+ LSQNQFS HIKEFQSKSLE
Sbjct: 1 MPSINPNVFINLSSSIKSLSLGGCDLQGKFSRNVLHSPNLNLLNLGYNRNLILDLLKFNQSSNLEHLDLSWMSSFSKLIDLIDNLHVLKYLSLSNSNLQGSISRSLGNLLWLIYLDLSWNQLSEQVPLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNNLPNGKLLSWLYNAFSLMEISLSQNQFSGHIKEFQSKSLE 207
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A0D2SIT9_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_009G449100 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.098e-54 Identity = 155/274 (56.57%), Postives = 170/274 (62.04%), Query Frame = 0
Query: 83 FTSMIYDRVIETWHAASFVFPDCAMSEISALKAP--------ALDN--MGYLLRNLSEQSSDLV--IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQS-----------------------------------------------------NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
FT ++Y + ET A +S++ +L LD + L+ NL+E + IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKF NILHSPNLNLLNLGYNRNLSLDLLKF QS +LSWNQLSGQV LSI+NLTQL+HLRIAENSLEGPIPDEVAAFPNLISLDLSN L N KL SWLY ASSLME+YLSQNQFS HIKEFQSKSLE
Sbjct: 140 FTRLVYLNISETLFAGKVPSQISHLSKLVSLDLSHNVFFDQLTLDKNILEGLVHNLTEVRHLFLDRIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFPSNILHSPNLNLLNLGYNRNLSLDLLKFNQSSNLEHLDLSWMSFTKLIDSIDNLHALKYLDLSHSNLRGSISRSLGNLLQLTYLDLSWNQLSGQVPLSILNLTQLQHLRIAENSLEGPIPDEVAAFPNLISLDLSNNLLNGKLPSWLYTASSLMEIYLSQNQFSGHIKEFQSKSLE 413
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A1U8KW37_GOSHI (receptor-like protein 12 OS=Gossypium hirsutum OX=3635 GN=LOC107921282 PE=4 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 1.248e-54 Identity = 155/274 (56.57%), Postives = 170/274 (62.04%), Query Frame = 0
Query: 83 FTSMIYDRVIETWHAASFVFPDCAMSEISALKAP--------ALDN--MGYLLRNLSEQSSDLV--IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQS-----------------------------------------------------NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
FT ++Y + ET A +S++ +L LD + L+ NL+E + IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKF NILHSPNLNLLNLGYNRNLSLDLLKF QS +LSWNQLSGQV LSI+NLTQL+HLRIAENSLEGPIPDEVAAFPNLISLDLSN L N KL SWLY ASSLME+YLSQNQFS HIKEFQSKSLE
Sbjct: 140 FTRLVYLNISETLFAGKVPSQISHLSKLVSLDLSHNVFFDQLTLDKNILEGLVHNLTEVRHLFLDRIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFPSNILHSPNLNLLNLGYNRNLSLDLLKFNQSSNLEHLDLSWMSFTKLIDSIDNLHALKYLDLSHSNLRGSISRSLGNLLQLTYLDLSWNQLSGQVPLSILNLTQLQHLRIAENSLEGPIPDEVAAFPNLISLDLSNNLLNGKLPSWLYTASSLMEIYLSQNQFSGHIKEFQSKSLE 413
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A1R3KAX4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_09808 PE=4 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 8.912e-50 Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIY------DRVIETWHAA--SFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCF EW+EEF+SQE GN VV YFLKDS+ +S+ AVIG++RS+R MFYVVAEEFVRVY A++S HAGFKWRSRREVVDW TSM+ DR H + DCAM+EISA +A ALD+MG+L RNL+ QSSD+V
Sbjct: 1 MSGNGHCFVEWKEEFVSQERGNRVVHYFLKDSSGDSIRAVIGTERSVRHMFYVVAEEFVRVYGAEHSIHAGFKWRSRREVVDWLTSMLSKQHLQGDRSKSPKHDVLLALASTDCAMNEISARRARALDDMGHLSRNLNGQSSDIV 145
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A061F581_THECC (Agenet domain-containing protein / bromo-adjacent domain-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_030669 PE=4 SV=1) HSP 1 Score: 184.111 bits (466), Expect = 1.375e-49 Identity = 94/145 (64.83%), Postives = 109/145 (75.17%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIY------DRVIETWHAA--SFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCF EW+EEF+SQE GN VV YFLKDS ES+ AVIG++RS+R MFYVVAEEFVRVY A++S HAGFKWRSRREVVDW TSM+ DR H A + PDCAM+EISA KA ALD+M +L RN + SSD+V
Sbjct: 3 MSGNGHCFTEWKEEFVSQERGNRVVHYFLKDSAGESIRAVIGTERSVRHMFYVVAEEFVRVYGAEHSIHAGFKWRSRREVVDWLTSMLSKQHLQGDRSKSPKHEALLALASPDCAMNEISARKAQALDDMSHLSRNWNGPSSDIV 147
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A2P5S4U0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD08927 PE=4 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.167e-45 Identity = 84/137 (61.31%), Postives = 97/137 (70.80%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIY------DRVIETWHAASFVF--PDCAMSEISALKAPALDNMGYLLRNL 128
MSGNGHCF EW+EEF+SQE GN VV YFLKDS ES+ AVIG++RS+R MFY+VAEEFV+VY A++S HAGFKWRSRREVVDW TSM+ DR H PD AM EISA KA D+M + RNL
Sbjct: 1 MSGNGHCFVEWKEEFVSQERGNRVVHYFLKDSVGESIRAVIGTERSVRHMFYIVAEEFVKVYGAEHSIHAGFKWRSRREVVDWLTSMLSKQHLEGDRCKSPKHDTLLALRSPDGAMIEISARKALQ-DDMSHFSRNL 136
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Match: A0A1U8L2W2_GOSHI (uncharacterized protein LOC107922045 OS=Gossypium hirsutum OX=3635 GN=LOC107922045 PE=4 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.277e-45 Identity = 89/145 (61.38%), Postives = 107/145 (73.79%), Query Frame = 0
Query: 1 MSGNGHCF-EWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAAS--------FVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCF EW+EEF+SQE GN VV YFLKDS ES+ AVIG++RS+R MFY+VAEEFV+VY A++S HAGFKWRSRREVVDW TSM+ + +E + S PDCAM EISA KA D+M + RNL+ QSSD+V
Sbjct: 1 MSGNGHCFVEWKEEFVSQERGNRVVHYFLKDSAGESIRAVIGTERSVRHMFYIVAEEFVKVYGAEHSIHAGFKWRSRREVVDWLTSMLSKQHLEGDRSKSPKHDTLLALRSPDCAMIEISARKA-LQDDMSHFSRNLNGQSSDIV 144
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|823222500|ref|XP_012443968.1| (PREDICTED: uncharacterized protein LOC105768551 [Gossypium raimondii]) HSP 1 Score: 290.041 bits (741), Expect = 9.155e-97 Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0
Query: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV
Sbjct: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|823222492|ref|XP_012443963.1| (PREDICTED: uncharacterized protein LOC105768550 isoform X1 [Gossypium raimondii] >gi|823222494|ref|XP_012443964.1| PREDICTED: uncharacterized protein LOC105768550 isoform X1 [Gossypium raimondii]) HSP 1 Score: 268.085 bits (684), Expect = 3.742e-88 Identity = 126/137 (91.97%), Postives = 130/137 (94.89%), Query Frame = 0
Query: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRR-EVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRS+R MFYVVAEEFVRVYAA+NSNHAGFKWRSRR EVVDW TSMIYDRV ETWHAASF FPDCAM EISALKA ALDNMGYLLRNL+EQSSD+V
Sbjct: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSVRYMFYVVAEEFVRVYAAENSNHAGFKWRSRREEVVDWLTSMIYDRVTETWHAASFAFPDCAMIEISALKAQALDNMGYLLRNLTEQSSDIV 137
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|1028951564|ref|XP_016719160.1| (PREDICTED: uncharacterized protein LOC107931738 [Gossypium hirsutum] >gi|1029041390|ref|XP_016684502.1| PREDICTED: uncharacterized protein LOC107902905 [Gossypium hirsutum]) HSP 1 Score: 268.085 bits (684), Expect = 3.780e-88 Identity = 124/136 (91.18%), Postives = 129/136 (94.85%), Query Frame = 0
Query: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
MSGNGHCFEWQEEFIS ECGNCVVQYFLKDSTSESVCAVIGSQRS+RQMFYVVAEEFVR YAA+NSNHAGF+WRSRREVVDW TSMIYDRV ETWHAASF FPDCAM EISALKA ALDNMGYLLRNL+EQSSD+V
Sbjct: 1 MSGNGHCFEWQEEFISLECGNCVVQYFLKDSTSESVCAVIGSQRSVRQMFYVVAEEFVREYAAENSNHAGFEWRSRREVVDWLTSMIYDRVTETWHAASFAFPDCAMIEISALKAQALDNMGYLLRNLTEQSSDIV 136
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|1344101678|gb|PPD76062.1| (hypothetical protein GOBAR_DD27023 [Gossypium barbadense]) HSP 1 Score: 227.254 bits (578), Expect = 7.526e-72 Identity = 111/131 (84.73%), Postives = 114/131 (87.02%), Query Frame = 0
Query: 1 MSGNGHCFEWQEEFISQECGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRREVVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQ 131
MSGNGHCFEWQEEFISQ+CGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAA+NSNHAGFKWRSRREVVDWFT+MIY FVFPDCAMSEISALKAPALDNM Y L L Q
Sbjct: 1 MSGNGHCFEWQEEFISQDCGNCVVQYFLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAENSNHAGFKWRSRREVVDWFTAMIY-----------FVFPDCAMSEISALKAPALDNMVYYLDFLLVQ 120
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|823222498|ref|XP_012443966.1| (PREDICTED: uncharacterized protein LOC105768550 isoform X3 [Gossypium raimondii] >gi|763796011|gb|KJB63007.1| hypothetical protein B456_009G448700 [Gossypium raimondii]) HSP 1 Score: 202.601 bits (514), Expect = 1.557e-62 Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 27 FLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRRE-VVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
F DSTSESVCAVIGSQRS+R MFYVVAEEFVRVYAA+NSNHAGFKWRSRRE VVDW TSMIYDRV ETWHAASF FPDCAM EISALKA ALDNMGYLLRNL+EQSSD+V
Sbjct: 16 FSYDSTSESVCAVIGSQRSVRYMFYVVAEEFVRVYAAENSNHAGFKWRSRREEVVDWLTSMIYDRVTETWHAASFAFPDCAMIEISALKAQALDNMGYLLRNLTEQSSDIV 126
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|823222496|ref|XP_012443965.1| (PREDICTED: uncharacterized protein LOC105768550 isoform X2 [Gossypium raimondii]) HSP 1 Score: 202.601 bits (514), Expect = 1.643e-62 Identity = 98/111 (88.29%), Postives = 102/111 (91.89%), Query Frame = 0
Query: 27 FLKDSTSESVCAVIGSQRSIRQMFYVVAEEFVRVYAAKNSNHAGFKWRSRRE-VVDWFTSMIYDRVIETWHAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV 136
F DSTSESVCAVIGSQRS+R MFYVVAEEFVRVYAA+NSNHAGFKWRSRRE VVDW TSMIYDRV ETWHAASF FPDCAM EISALKA ALDNMGYLLRNL+EQSSD+V
Sbjct: 18 FSYDSTSESVCAVIGSQRSVRYMFYVVAEEFVRVYAAENSNHAGFKWRSRREEVVDWLTSMIYDRVTETWHAASFAFPDCAMIEISALKAQALDNMGYLLRNLTEQSSDIV 128
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|1344090384|gb|PPD66734.1| (hypothetical protein GOBAR_DD36390 [Gossypium barbadense]) HSP 1 Score: 191.815 bits (486), Expect = 4.510e-57 Identity = 131/207 (63.29%), Postives = 136/207 (65.70%), Query Frame = 0
Query: 139 MPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPN-------------LNLLNLGYNRNLS-LDL---------------------LKFYQSNL-------------------SWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
MPSINPNVF+NLSSSIKSLSLGGCDLQGKFSRN+LHSPN L+LL + NL LDL L SNL SWNQLS QV LSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSN LPN KLLSWLYNA SLME+ LSQNQFS HIKEFQSKSLE
Sbjct: 1 MPSINPNVFINLSSSIKSLSLGGCDLQGKFSRNVLHSPNLNLLNLGYNRNLILDLLKFNQSSNLEHLDLSWMSSFSKLIDLIDNLHVLKYLSLSNSNLQGSISRSLGNLLWLIYLDLSWNQLSEQVPLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNNLPNGKLLSWLYNAFSLMEISLSQNQFSGHIKEFQSKSLE 207
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|1050647309|ref|XP_017646986.1| (PREDICTED: receptor-like protein 12 [Gossypium arboreum] >gi|1050647311|ref|XP_017646987.1| PREDICTED: receptor-like protein 12 [Gossypium arboreum] >gi|1050647313|ref|XP_017646988.1| PREDICTED: receptor-like protein 12 [Gossypium arboreum] >gi|1050647315|ref|XP_017646989.1| PREDICTED: receptor-like protein 12 [Gossypium arboreum] >gi|1050647317|ref|XP_017646990.1| PREDICTED: receptor-like protein 12 [Gossypium arboreum] >gi|1050647319|ref|XP_017646991.1| PREDICTED: receptor-like protein 12 [Gossypium arboreum] >gi|1050647321|ref|XP_017646992.1| PREDICTED: receptor-like protein 12 [Gossypium arboreum]) HSP 1 Score: 201.445 bits (511), Expect = 1.309e-56 Identity = 142/274 (51.82%), Postives = 161/274 (58.76%), Query Frame = 0
Query: 83 FTSMIYDRVIETW----------HAASFVFPDCAMSEISALKAPALDNMGYLLRNLSEQSSDLV--IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQS-----------------------------------------------------NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
FT ++Y + ET H++ V D + + + + L+ NL+E + IIMPSIN NVFMNLSSSIKSLSLGGCDLQGKF NILH P LNLLNLGYNRNLSLD L F QS +LSWNQLSG+V LSI+NLTQL+HLRIAENSL+GPI DE AAFPNLISLDLSN L N KL SWLY ASSLME+ LSQNQFS HIK+FQSKSLE
Sbjct: 140 FTRLVYFNISETLFARKVPSQISHSSKLVSLDLSHNVFFDQLTIDRNTLEGLVHNLTEVRHLFLDRIIMPSINLNVFMNLSSSIKSLSLGGCDLQGKFPSNILHLPKLNLLNLGYNRNLSLDHLNFNQSSNLEHLDLSWMSYTKLIDSIDNLHVLKYLDLSHSNLQGSISRSLGNLLQLTYLDLSWNQLSGEVPLSILNLTQLQHLRIAENSLKGPILDEKAAFPNLISLDLSNNLLNGKLPSWLYVASSLMEISLSQNQFSGHIKQFQSKSLE 413
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|823222480|ref|XP_012443956.1| (PREDICTED: receptor-like protein 12 isoform X1 [Gossypium raimondii] >gi|763796017|gb|KJB63013.1| hypothetical protein B456_009G449100 [Gossypium raimondii]) HSP 1 Score: 200.29 bits (508), Expect = 1.307e-54 Identity = 155/274 (56.57%), Postives = 170/274 (62.04%), Query Frame = 0
Query: 83 FTSMIYDRVIETWHAASFVFPDCAMSEISALKAP--------ALDN--MGYLLRNLSEQSSDLV--IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQS-----------------------------------------------------NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
FT ++Y + ET A +S++ +L LD + L+ NL+E + IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKF NILHSPNLNLLNLGYNRNLSLDLLKF QS +LSWNQLSGQV LSI+NLTQL+HLRIAENSLEGPIPDEVAAFPNLISLDLSN L N KL SWLY ASSLME+YLSQNQFS HIKEFQSKSLE
Sbjct: 140 FTRLVYLNISETLFAGKVPSQISHLSKLVSLDLSHNVFFDQLTLDKNILEGLVHNLTEVRHLFLDRIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFPSNILHSPNLNLLNLGYNRNLSLDLLKFNQSSNLEHLDLSWMSFTKLIDSIDNLHALKYLDLSHSNLRGSISRSLGNLLQLTYLDLSWNQLSGQVPLSILNLTQLQHLRIAENSLEGPIPDEVAAFPNLISLDLSNNLLNGKLPSWLYTASSLMEIYLSQNQFSGHIKEFQSKSLE 413
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Match: gi|823222482|ref|XP_012443958.1| (PREDICTED: receptor-like protein 12 isoform X2 [Gossypium raimondii]) HSP 1 Score: 200.29 bits (508), Expect = 1.460e-54 Identity = 155/274 (56.57%), Postives = 170/274 (62.04%), Query Frame = 0
Query: 83 FTSMIYDRVIETWHAASFVFPDCAMSEISALKAP--------ALDN--MGYLLRNLSEQSSDLV--IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFSRNILHSPNLNLLNLGYNRNLSLDLLKFYQS-----------------------------------------------------NLSWNQLSGQVSLSIVNLTQLEHLRIAENSLEGPIPDEVAAFPNLISLDLSNILPNEKLLSWLYNASSLMEVYLSQNQFSDHIKEFQSKSLE 291
FT ++Y + ET A +S++ +L LD + L+ NL+E + IIMPSINPNVFMNLSSSIKSLSLGGCDLQGKF NILHSPNLNLLNLGYNRNLSLDLLKF QS +LSWNQLSGQV LSI+NLTQL+HLRIAENSLEGPIPDEVAAFPNLISLDLSN L N KL SWLY ASSLME+YLSQNQFS HIKEFQSKSLE
Sbjct: 140 FTRLVYLNISETLFAGKVPSQISHLSKLVSLDLSHNVFFDQLTLDKNILEGLVHNLTEVRHLFLDRIIMPSINPNVFMNLSSSIKSLSLGGCDLQGKFPSNILHSPNLNLLNLGYNRNLSLDLLKFNQSSNLEHLDLSWMSFTKLIDSIDNLHALKYLDLSHSNLRGSISRSLGNLLQLTYLDLSWNQLSGQVPLSILNLTQLQHLRIAENSLEGPIPDEVAAFPNLISLDLSNNLLNGKLPSWLYTASSLMEIYLSQNQFSGHIKEFQSKSLE 413 The following BLAST results are available for this feature:
BLAST of D5.v1.pred_00004509-RA vs. ExPASy Swiss-Prot
Analysis Date: 2019-07-26 (BLASTP of NSF v1.0.a1 Gossypium raimondii proteins vs UniProt Swissprot) Total hits: 7
BLAST of D5.v1.pred_00004509-RA vs. Araport11
Analysis Date: 2019-07-26 (BLASTP of NSF v1.0.a1 Gossypium raimondii proteins vs arabidopsis Araport11) Total hits: 10
BLAST of D5.v1.pred_00004509-RA vs. ExPASy TrEMBL
Analysis Date: 2019-07-26 (BLASTP of NSF v1.0.a1 Gossypium raimondii proteins vs UniProt TrEMBL) Total hits: 10
BLAST of D5.v1.pred_00004509-RA vs. NCBI nr
Analysis Date: 2019-08-05 (BLASTP of NSF v1.0.a1 Gossypium raimondii proteins vs NCBI nr) Total hits: 10
Sequences
The
following sequences are available for this feature:
mRNA sequence >D5.v1.pred_00004509-RA_BYU-D5_v1.a1 ID=D5.v1.pred_00004509-RA_BYU-D5_v1.a1; Name=D5.v1.pred_00004509-RA; organism=Gossypium raimondii; type=mRNA; length=876bpback to top protein sequence of D5.v1.pred_00004509-RA_BYU-D5_v1.a1 >D5.v1.pred_00004509-RA_BYU-D5_v1.a1 ID=D5.v1.pred_00004509-RA_BYU-D5_v1.a1; Name=D5.v1.pred_00004509-RA_BYU-D5_v1.a1; organism=Gossypium raimondii; type=polypeptide; length=291bpback to top mRNA from alignment at D5_05:56112508..56114339- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.>D5.v1.pred_00004509-RA_BYU-D5_v1.a1 ID=D5.v1.pred_00004509-RA_BYU-D5_v1.a1; Name=D5.v1.pred_00004509-RA; organism=Gossypium raimondii; type=mRNA; length=1832bp; location=Sequence derived from: D5_05:56112508..56114339- (Gossypium raimondiiback to top Coding sequence (CDS) from alignment at D5_05:56112508..56114339- >D5.v1.pred_00004509-RA_BYU-D5_v1.a1 ID=D5.v1.pred_00004509-RA_BYU-D5_v1.a1; Name=D5.v1.pred_00004509-RA; organism=Gossypium raimondii; type=CDS; length=876bp; location=Sequence derived from: D5_05:56112508..56114339- (Gossypium raimondiiback to top |