TX-0712 | Cottongen

Germplasm Overview

Cross References

Phenotypic Data

Snp Genotype Data

Ssr Genotype Data

Germplasm Overview


Name	TX-0712
Alias	CB 3323 [view all 7]
GRIN ID	PI 265148
Type	Wild Unimproved
Species	Gossypium hirsutum
In Collection	[view all]
Description	N/A
Origin Country	Nicaragua
Origin Detail	Nicaragua
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 32]
SSR Genotype Data	[view all 104]
SNP Genotype Data	[view all 63056]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	N/A

Alias


Synonym
CB 3323
H0216
NSSL 5498
PI 265148
TEX 712
TX 712
NSL 5498

Image


File Name	Legend	Dataset
TX-0712_CS16-1829_5D3_7689_ST.JPG	[TX-0712] stem, College Station Plot-1829, 2016	NCGC digital imaging (College Station, 2016)
TX-0712_CS16-1829_IMG_1363_L.JPG	[TX-0712] leaf, College Station Plot-1829, 2016	NCGC digital imaging (College Station, 2016)
TX-0712_CS16-1829_MG_7145_LB.JPG	[TX-0712] leaf close up of the back surface, College Station Plot-1829, 2016	NCGC digital imaging (College Station, 2016)
TX-0712_CS16-1829_MG_7146_ST.JPG	[TX-0712] stem, College Station Plot-1829, 2016	NCGC digital imaging (College Station, 2016)

Phenotypic Data

Phenotypic Data

Total 32 trait scores

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#	Dataset	Descriptor	Value	Environment	Replication	Plot
1	NCGC germplasm evaluation, T10	stigma exsertion	normal	MX_CLM_TCM_2010		20
2	NCGC germplasm evaluation, T10	trichome density on leaf	few	MX_CLM_TCM_2010		20
3	NCGC germplasm evaluation, T10	trichome density on stem	few	MX_CLM_TCM_2010		20
4	NCGC germplasm evaluation, T10	plant height (m)	1.37	MX_CLM_TCM_2010		20
5	NCGC germplasm evaluation, T10	leaf nectaries	one, main vein	MX_CLM_TCM_2010		20
6	NCGC germplasm evaluation, T10	plot plant stand	1 plant	MX_CLM_TCM_2010		20
7	NCGC germplasm evaluation, T10	productiveness	13-24 per plant	MX_CLM_TCM_2010		20

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Ssr Genotype Data

Total 104 records

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#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	NCGC_SNTD_SSR_genotype_2015	dpl0405	genetic_marker	251\|251	dpl0405_251; dpl0405_251
2	NCGC_SNTD_SSR_genotype_2015	jespr0065	genetic_marker	150\|173	jespr0065_150; jespr0065_173
3	NCGC_SNTD_SSR_genotype_2015	gh537	genetic_marker	168\|171\|174	gh537_168; gh537_171; gh537_174
4	NCGC_SNTD_SSR_genotype_2015	cir0169	genetic_marker	136\|136	cir0169_136; cir0169_136

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Snp Genotype Data

Total 63,056 records

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#	Dataset	Marker Name	Allele	Genotype
1	TAMU_SNP63K_genotype	UCD_Gh_M_000460	T/C	T
2	TAMU_SNP63K_genotype	UCD_Gh_M_000466	T/G	G
3	TAMU_SNP63K_genotype	UCD_Gh_M_000467	T/C	T
4	TAMU_SNP63K_genotype	UCD_Gh_M_000487	T/G	G
5	TAMU_SNP63K_genotype	UCD_Gh_M_000494	A/G	G
6	TAMU_SNP63K_genotype	UCD_Gh_M_000496	G/A	G
7	TAMU_SNP63K_genotype	UCD_Gh_M_000504	A/G	A
8	TAMU_SNP63K_genotype	UCD_Gh_M_000515	A/G	G
9	TAMU_SNP63K_genotype	UCD_Gh_M_000516	C/T	T
10	TAMU_SNP63K_genotype	UCD_Gh_M_000518	C/T	C
11	TAMU_SNP63K_genotype	UCD_Gh_M_000519	A/G	G
12	TAMU_SNP63K_genotype	UCD_Gh_M_000521	T/C	C
13	TAMU_SNP63K_genotype	UCD_Gh_M_000545	A/G	G
14	TAMU_SNP63K_genotype	UCD_Gh_M_000578	T/C	T
15	TAMU_SNP63K_genotype	UCD_Gh_M_000605	A/G	R
16	TAMU_SNP63K_genotype	UCD_Gh_M_000606	T/C	T
17	TAMU_SNP63K_genotype	UCD_Gh_M_000616	T/C	C
18	TAMU_SNP63K_genotype	UCD_Gh_M_000617	A/G	G
19	TAMU_SNP63K_genotype	UCD_Gh_M_000619	C/T	T
20	TAMU_SNP63K_genotype	UCD_Gh_M_000624	A/G	G
21	TAMU_SNP63K_genotype	UCD_Gh_M_000633	T/C	T
22	TAMU_SNP63K_genotype	UCD_Gh_M_000639	C/A	M
23	TAMU_SNP63K_genotype	UCD_Gh_M_000649	T/C	C
24	TAMU_SNP63K_genotype	UCD_Gh_M_000688	A/G	G
25	TAMU_SNP63K_genotype	UCD_Gh_M_000693	A/G	G

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Cross References

External references for this accession


Database	Accession
COLL_race	TX-0712
GRIN	PI 265148

In Collection

In Collection

Name	ID used in Collection	External Database
GRIN NPGS Cotton Collection (USA)	PI 265148	GRIN:
NCGC Cotton Race Collection (USA)	TX-0712