Cottongen

Project Overview


Name	GG-RIL-2016
Type	QTL
Description	QTLs for fiber quality and oil content and seed index
Contact	Hua, Jin-Ping

Genetic Maps

This project contains 2 Maps:


Name
GX1135 x GX100-2, RIL (2016)
GX1135 x VGX100-2, RIL (2016)

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Germplasm

This project contains 722 stocks:


Name	Type
cdbgm_014968	accession
cdbpop_000149	population
cdbpop_000150	population
cdbpop_000151	population
cdbpop_000152	population
cdbpop_000153	population
cdbpop_000154	population
cdbpop_000155	population
cdbprg_GG-RIL-001	accession
cdbprg_GG-RIL-002	accession
cdbprg_GG-RIL-003	accession
cdbprg_GG-RIL-004	accession
cdbprg_GG-RIL-005	accession
cdbprg_GG-RIL-006	accession
cdbprg_GG-RIL-007	accession
cdbprg_GG-RIL-008	accession
cdbprg_GG-RIL-009	accession
cdbprg_GG-RIL-010	accession
cdbprg_GG-RIL-011	accession
cdbprg_GG-RIL-012	accession
cdbprg_GG-RIL-013	accession
cdbprg_GG-RIL-014	accession
cdbprg_GG-RIL-015	accession
cdbprg_GG-RIL-016	accession
cdbprg_GG-RIL-017	accession

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Last

Contact

Name

Details

Hua, Jin-Ping

Description	:	Genomics and Heterosis
First name	:	Jin-Ping
Last name	:	Hua
Title	:	Prof.
Institution	:	China Agricultural University
Address	:	No. 2, Yuanmingyuan Western Rd, Haidian, Beijing 100193
Country	:	China
Email	:	jinping_hua@cau.edu.cn
Phone	:	+086-10-62734748
Fax	:	+086-10-62734748
Keywords	:	Cotton genetics and breeding
Last update	:	30-Apr-2010

Traits

This project contains 7 Traits:


Name
seed oil content
seed index
fiber elongation
micronaire
2.5 span length
fiber uniformity
fiber strength

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Publications


Year	Publication
2016	Shang L, Wang Y, Wang X, Liu F, Abduweli A, Cai S, Li Y, Ma L, Wang K, Hua J. Genetic Analysis and Stable QTL Detection on Fiber Quality Traits Using Two Recombinant Inbred Line Populations and Their Backcross Progeny in Upland Cotton. G3 (Bethesda, Md.). 2016 Jun 24.
2016	Shang L, Abduweli A, Wang Y, Hua J. Genetic analysis and QTL mapping of oil content and seed index using two recombinant inbred lines and two backcross populations in upland cotton. Plant Breeding. 2016 Dec 12; 135:224–231.

Trait Descriptors

This project contains 7 Trait Descriptors:


Group	Descriptor
cotton_trait_descriptor	SI (g)
cotton_trait_descriptor	MIC (unit)
cotton_trait_descriptor	FUR (%)
cotton_trait_descriptor	FEL (%)
cotton_trait_descriptor	FS (cN/tex)
cotton_trait_descriptor	SL2.5 (mm)
cotton_trait_descriptor	SOC (%)

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QTL

This project contains 198 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
GX1135 x GX100-2, RIL (2016).chr11	qSOC.GG-RIL.16_ch11.hd12-ril'	QTL	114.7	116.4	-
GX1135 x GX100-2, RIL (2016).chr06	qSI.GG-RIL.16_ch06.xy12-bc.2	QTL	103.3	103.9	-
GX1135 x GX100-2, RIL (2016).chr09	qSOC.GG-RIL.16_ch09.cz12-ril'	QTL	72.5	95.7	-
GX1135 x GX100-2, RIL (2016).chr09	qSOC.GG-RIL.16_ch09.hd12-ril'	QTL	72.5	95.7	-
GX1135 x GX100-2, RIL (2016).chr18-1	qFEL.GG-RIL.16_ch18-1.xy12	QTL	36.4	77.7	-
GX1135 x GX100-2, RIL (2016).chr18-1	qSL2.5.GG-RIL.16_ch18-1.cz12	QTL	118.2	129.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12.6	QTL	130.8	132.2	-
GX1135 x GX100-2, RIL (2016).chr21	qFS.GG-RIL.16_ch21.cz12-bc	QTL	160.5	167.3	-
GX1135 x GX100-2, RIL (2016).chr21	qSOC.GG-RIL.16_ch21.cz12-ril	QTL	254.7	262.5	-
GX1135 x GX100-2, RIL (2016).chr21	qSOC.GG-RIL.16_ch21.hd12-ril'	QTL	254.7	262.5	-
GX1135 x GX100-2, RIL (2016).chr06	qSOC.GG-RIL.16_ch06.hd12-ril.1	QTL	65.6	77.1	-
GX1135 x GX100-2, RIL (2016).chr03	qFU.GG-RIL.16_ch03.cz12	QTL	0	2.8	-
GX1135 x GX100-2, RIL (2016).chr13	qFS.GG-RIL.16_ch13.cz12.3	QTL	49.2	51.5	-
GX1135 x GX100-2, RIL (2016).chr11	qFEL.GG-RIL.16_ch11.hd12-bc	QTL	28.9	71.7	-
GX1135 x GX100-2, RIL (2016).chr26-1	qSOC.GG-RIL.16_ch26-1.hd12-ril'	QTL	82.8	83.1	-
GX1135 x GX100-2, RIL (2016).chr01-1	qFS.GG-RIL.16_ch01-1.xy12-bc	QTL	124.2	156.5	-
GX1135 x GX100-2, RIL (2016).chr14	qMIC.GG-RIL.16_ch14.xy12.2	QTL	77.9	95.2	-
GX1135 x GX100-2, RIL (2016).chr21	qFS.GG-RIL.16_ch21.cz12.3	QTL	169.1	173.6	-
GX1135 x GX100-2, RIL (2016).chr21	qFS.GG-RIL.16_ch21.hd12-bc	QTL	169.1	173.6	-
GX1135 x GX100-2, RIL (2016).chr21	qFS.GG-RIL.16_ch21.hd12.2	QTL	169.1	173.6	-
GX1135 x GX100-2, RIL (2016).chr21	qSL2.5.GG-RIL.16_ch21.hd12.2	QTL	169.1	173.6	-
GX1135 x GX100-2, RIL (2016).chr21	qFS.GG-RIL.16_ch21.cz12.2	QTL	160.5	167.3	-
GX1135 x GX100-2, RIL (2016).chr21	qSL2.5.GG-RIL.16_ch21.cz12	QTL	160.5	167.3	-
GX1135 x GX100-2, RIL (2016).chr21	qSL2.5.GG-RIL.16_ch21.xy12	QTL	160.5	167.3	-
GX1135 x GX100-2, RIL (2016).chr21	qSL2.5.GG-RIL.16_ch21.xy12-bc	QTL	160.5	167.3	-

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