Cottongen

Project Overview


Name	GG-RIL-2016
Type	QTL
Description	QTLs for fiber quality and oil content and seed index
Contact	Hua, Jin-Ping

Genetic Maps

This project contains 2 Maps:


Name
GX1135 x GX100-2, RIL (2016)
GX1135 x VGX100-2, RIL (2016)

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Germplasm

This project contains 722 stocks:


Name	Type
cdbprg_GG-RIL-068	accession
cdbprg_GG-RIL-069	accession
cdbprg_GG-RIL-070	accession
cdbprg_GG-RIL-071	accession
cdbprg_GG-RIL-072	accession
cdbprg_GG-RIL-073	accession
cdbprg_GG-RIL-074	accession
cdbprg_GG-RIL-075	accession
cdbprg_GG-RIL-076	accession
cdbprg_GG-RIL-077	accession
cdbprg_GG-RIL-078	accession
cdbprg_GG-RIL-079	accession
cdbprg_GG-RIL-080	accession
cdbprg_GG-RIL-081	accession
cdbprg_GG-RIL-082	accession
cdbprg_GG-RIL-083	accession
cdbprg_GG-RIL-084	accession
cdbprg_GG-RIL-085	accession
cdbprg_GG-RIL-086	accession
cdbprg_GG-RIL-087	accession
cdbprg_GG-RIL-088	accession
cdbprg_GG-RIL-089	accession
cdbprg_GG-RIL-090	accession
cdbprg_GG-RIL-091	accession
cdbprg_GG-RIL-092	accession

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Last

Contact

Name

Details

Hua, Jin-Ping

Description	:	Genomics and Heterosis
First name	:	Jin-Ping
Last name	:	Hua
Title	:	Prof.
Institution	:	China Agricultural University
Address	:	No. 2, Yuanmingyuan Western Rd, Haidian, Beijing 100193
Country	:	China
Email	:	jinping_hua@cau.edu.cn
Phone	:	+086-10-62734748
Fax	:	+086-10-62734748
Keywords	:	Cotton genetics and breeding
Last update	:	30-Apr-2010

Traits

This project contains 7 Traits:


Name
seed oil content
seed index
fiber elongation
micronaire
2.5 span length
fiber uniformity
fiber strength

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Publications


Year	Publication
2016	Shang L, Wang Y, Wang X, Liu F, Abduweli A, Cai S, Li Y, Ma L, Wang K, Hua J. Genetic Analysis and Stable QTL Detection on Fiber Quality Traits Using Two Recombinant Inbred Line Populations and Their Backcross Progeny in Upland Cotton. G3 (Bethesda, Md.). 2016 Jun 24.
2016	Shang L, Abduweli A, Wang Y, Hua J. Genetic analysis and QTL mapping of oil content and seed index using two recombinant inbred lines and two backcross populations in upland cotton. Plant Breeding. 2016 Dec 12; 135:224–231.

Trait Descriptors

This project contains 7 Trait Descriptors:


Group	Descriptor
cotton_trait_descriptor	SI (g)
cotton_trait_descriptor	MIC (unit)
cotton_trait_descriptor	FUR (%)
cotton_trait_descriptor	FEL (%)
cotton_trait_descriptor	FS (cN/tex)
cotton_trait_descriptor	SL2.5 (mm)
cotton_trait_descriptor	SOC (%)

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QTL

This project contains 198 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12.3	QTL	120.7	122.9	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12.4	QTL	120.7	122.9	-
GX1135 x GX100-2, RIL (2016).chr18-1	qFS.GG-RIL.16_ch18-1.hd12	QTL	77.7	107.6	-
GX1135 x GX100-2, RIL (2016).chr18-1	qFS.GG-RIL.16_ch18-1.xy12	QTL	77.7	107.6	-
GX1135 x GX100-2, RIL (2016).chr02-2	qMIC.GG-RIL.16_ch02-2.cz12	QTL	93.7	94.3	-
GX1135 x GX100-2, RIL (2016).chr19	qMIC.GG-RIL.16_ch19.hd12-bc.2	QTL	11.1	12.1	-
GX1135 x GX100-2, RIL (2016).chr19	qMIC.GG-RIL.16_ch19.hd12.3	QTL	11.1	12.1	-
GX1135 x GX100-2, RIL (2016).chr19	qMIC.GG-RIL.16_ch19.xy12.3	QTL	11.1	12.1	-
GX1135 x GX100-2, RIL (2016).chr19	qFS.GG-RIL.16_ch19.hd12.1	QTL	34.5	82.8	-
GX1135 x GX100-2, RIL (2016).chr19	qFS.GG-RIL.16_ch19.hd12.2	QTL	34.5	82.8	-
GX1135 x GX100-2, RIL (2016).chr19	qFS.GG-RIL.16_ch19.xy12.1	QTL	34.5	82.8	-
GX1135 x GX100-2, RIL (2016).chr19	qFS.GG-RIL.16_ch19.xy12.2	QTL	34.5	82.8	-
GX1135 x GX100-2, RIL (2016).chr07	qSOC.GG-RIL.16_ch07.hd12-ril'	QTL	16.1	31.7	-
GX1135 x GX100-2, RIL (2016).chr19	qSI.GG-RIL.16_ch19.cz12-bc	QTL	175.5	191.5	-
GX1135 x GX100-2, RIL (2016).chr01-1	qSOC.GG-RIL.16_ch01-1.hd12-ril	QTL	120.4	122.7	-
GX1135 x GX100-2, RIL (2016).chr12-1	qSI.GG-RIL.16_ch12-1.cz12-ril	QTL	59.7	77.7	-
GX1135 x GX100-2, RIL (2016).chr12-1	qSI.GG-RIL.16_ch12-1.cz12-ril'	QTL	59.7	77.7	-
GX1135 x GX100-2, RIL (2016).chr04-1	qMIC.GG-RIL.16_ch04-1.hd12.3	QTL	70.1	91.5	-
GX1135 x GX100-2, RIL (2016).chr26-1	qMIC.GG-RIL.16_ch26-1.hd12-bc.2	QTL	37.3	43.2	-
GX1135 x GX100-2, RIL (2016).chr05	qFS.GG-RIL.16_ch05.cz12	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qFS.GG-RIL.16_ch05.xy12.1	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qFS.GG-RIL.16_ch05.xy12.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.cz12.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.cz12-ril.2	QTL	14.9	31.3	-

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