Cottongen

Project Overview


Name	GG-RIL-2016
Type	QTL
Description	QTLs for fiber quality and oil content and seed index
Contact	Hua, Jin-Ping

Genetic Maps

This project contains 2 Maps:


Name
GX1135 x GX100-2, RIL (2016)
GX1135 x VGX100-2, RIL (2016)

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Germplasm

This project contains 722 stocks:


Name	Type
cdbprg_GG-RIL-093	accession
cdbprg_GG-RIL-094	accession
cdbprg_GG-RIL-095	accession
cdbprg_GG-RIL-096	accession
cdbprg_GG-RIL-097	accession
cdbprg_GG-RIL-098	accession
cdbprg_GG-RIL-099	accession
cdbprg_GG-RIL-100	accession
cdbprg_GG-RIL-101	accession
cdbprg_GG-RIL-102	accession
cdbprg_GG-RIL-103	accession
cdbprg_GG-RIL-104	accession
cdbprg_GG-RIL-105	accession
cdbprg_GG-RIL-106	accession
cdbprg_GG-RIL-107	accession
cdbprg_GG-RIL-108	accession
cdbprg_GG-RIL-109	accession
cdbprg_GG-RIL-110	accession
cdbprg_GG-RIL-111	accession
cdbprg_GG-RIL-112	accession
cdbprg_GG-RIL-113	accession
cdbprg_GG-RIL-114	accession
cdbprg_GG-RIL-115	accession
cdbprg_GG-RIL-116	accession
cdbprg_GG-RIL-117	accession

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Last

Contact

Name

Details

Hua, Jin-Ping

Description	:	Genomics and Heterosis
First name	:	Jin-Ping
Last name	:	Hua
Title	:	Prof.
Institution	:	China Agricultural University
Address	:	No. 2, Yuanmingyuan Western Rd, Haidian, Beijing 100193
Country	:	China
Email	:	jinping_hua@cau.edu.cn
Phone	:	+086-10-62734748
Fax	:	+086-10-62734748
Keywords	:	Cotton genetics and breeding
Last update	:	30-Apr-2010

Traits

This project contains 7 Traits:


Name
seed oil content
seed index
fiber elongation
micronaire
2.5 span length
fiber uniformity
fiber strength

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Publications


Year	Publication
2016	Shang L, Wang Y, Wang X, Liu F, Abduweli A, Cai S, Li Y, Ma L, Wang K, Hua J. Genetic Analysis and Stable QTL Detection on Fiber Quality Traits Using Two Recombinant Inbred Line Populations and Their Backcross Progeny in Upland Cotton. G3 (Bethesda, Md.). 2016 Jun 24.
2016	Shang L, Abduweli A, Wang Y, Hua J. Genetic analysis and QTL mapping of oil content and seed index using two recombinant inbred lines and two backcross populations in upland cotton. Plant Breeding. 2016 Dec 12; 135:224–231.

Trait Descriptors

This project contains 7 Trait Descriptors:


Group	Descriptor
cotton_trait_descriptor	SI (g)
cotton_trait_descriptor	MIC (unit)
cotton_trait_descriptor	FUR (%)
cotton_trait_descriptor	FEL (%)
cotton_trait_descriptor	FS (cN/tex)
cotton_trait_descriptor	SL2.5 (mm)
cotton_trait_descriptor	SOC (%)

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QTL

This project contains 198 QTL:

Download Table


Linkage Group	Name	Type	Start	Stop	Peak
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.cz12-ril'.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.hd12-ril.1	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.hd12-ril'.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.xy12-ril.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.xy12-bc.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.xy12-ril'.2	QTL	14.9	31.3	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12-bc.3	QTL	129.5	130.8	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12.5	QTL	129.5	130.8	-
GX1135 x GX100-2, RIL (2016).chr25	qSOC.GG-RIL.16_ch25.hd12-ril	QTL	141.9	149.2	-
GX1135 x GX100-2, RIL (2016).chr26-1	qFS.GG-RIL.16_ch26-1.cz12	QTL	201.9	202.2	-
GX1135 x GX100-2, RIL (2016).chr14	qMIC.GG-RIL.16_ch14.xy12.3	QTL	96.9	103.6	-
GX1135 x GX100-2, RIL (2016).chr05	qFS.GG-RIL.16_ch05.hd12.1	QTL	31.3	54.7	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.hd12.1	QTL	31.3	54.7	-
GX1135 x GX100-2, RIL (2016).chr22	qMIC.GG-RIL.16_ch22.cz12-bc	QTL	13.5	19.8	-
GX1135 x GX100-2, RIL (2016).chr05	qSL2.5.GG-RIL.16_ch05.xy12-bc.1	QTL	54.7	64.5	-
GX1135 x GX100-2, RIL (2016).chr26-1	qFU.GG-RIL.16_ch26-1.hd12-bc	QTL	127.8	148.6	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.hd12-ril.2	QTL	115.4	120.7	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.hd12-ril'.3	QTL	115.4	120.7	-
GX1135 x GX100-2, RIL (2016).chr05	qSI.GG-RIL.16_ch05.xy12-ril.3	QTL	115.4	120.7	-
GX1135 x GX100-2, RIL (2016).chr21	qFS.GG-RIL.16_ch21.hd12.1	QTL	156.3	160.5	-
GX1135 x GX100-2, RIL (2016).chr21	qSL2.5.GG-RIL.16_ch21.cz12-bc	QTL	156.3	160.5	-
GX1135 x GX100-2, RIL (2016).chr21	qSL2.5.GG-RIL.16_ch21.hd12.1	QTL	156.3	160.5	-
GX1135 x GX100-2, RIL (2016).chr01-1	qFS.GG-RIL.16_ch01-1.hd12	QTL	40.7	47.8	-
GX1135 x GX100-2, RIL (2016).chr02-1	qSL2.5.GG-RIL.16_ch02-1.cz12	QTL	5	5.2	-
GX1135 x GX100-2, RIL (2016).chr15	qMIC.GG-RIL.16_ch15.xy12-bc	QTL	0.6	4.5	-

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