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Marker Overview
Name | HAU0817 |
Genbank ID | CO115075 |
Type | SSR |
Species | Gossypium spp. |
Source Sequence | CO115075
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Source Type | EST |
Repeat Motif | (GTTTT)4 |
PCR Condition | Annealing temperature: 57.0 |
Primer 1 | HAU0817_F: ATTTCAACGGCATATGGATT |
Primer 2 | HAU0817_R: CATTTCCACAAAAACAACGA |
Product Length | 289 |
Publication | [view all] |
Comment | Primer data obtained in 2012 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Feature Name | Type | Location | Analysis | Reference |
Chr03 | chromosome | HAU0817:2..630 . Chr03:12306309..12307048 - | | n/a |
scaffold90 | supercontig | HAU0817:2..630 . scaffold90:1322311..1323050 - | | n/a |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Sequence
>HAU0817 ID=HAU0817; Name=HAU0817; organism=Gossypium spp.; type=genetic_marker; length=289bp ATTTCAACGGCATATGGATTTTCTGGGGGGGCCCCCTGATCGGGGGGGGA TTGGCTGGTTTCTTTTATGGAAATGTGTTCATGAATTTTGCCCATGCCCC ATTGTCCAATGACTTTTAATCAAGTTTTTTTCAGGCCAGTTTAATTTGCT TAATTTGATTTTTTAATCCCTTGCTTAGGGTAATAAAAAGGCCCTTTTTG TTGTTTTTTCCTTTTTTAGCTTTGGGTTTGGTTTTGTTTTGTTATTGTTT GTAAAGTTATTGTCCCCAATCGTTGTTTTTGTGGAAATG
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