g.arboreum_cottongen_reftransV1_0004217, g.arboreum_cottongen_reftransV1_0004217 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A0D2S8A2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G045000 PE=4 SV=1) HSP 1 Score: 592.808 bits (1527), Expect = 0.000e+0 Identity = 298/303 (98.35%), Postives = 300/303 (99.01%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSS+LSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQI NADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPA LIDRLADLDKC+AERALATIELLCRIPSGC AFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF Sbjct: 114 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSDLSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQISNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPATLIDRLADLDKCDAERALATIELLCRIPSGCSAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 416
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A061E0Y0_THECC (Plant U-box 26 OS=Theobroma cacao GN=TCM_007082 PE=4 SV=1) HSP 1 Score: 520.39 bits (1339), Expect = 0.000e+0 Identity = 259/305 (84.92%), Postives = 285/305 (93.44%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGS--SELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS+VS+PFQ RLSALRRLKGLARDSDKNRSVISSH+ARE+LI+IVFSDTGS SEL+ EALA+LVMFQL ESEC SI SD N+V+YLS++LFHSSIEVR+NSASLIE V++GTRS DLRAQI N DEIFEGV D+L+NLNSYPRAL+I +RALFALCLVKQTRHKAVQAGA LIDRLADLDKC+AERALATIELLCRIPSGC AFAAHALTVPLLVKTILKISDRATE++AGAL+ALCSESE SQR+AVSAG+LTQLLLLVQSDCT+RAKRKAQ LLKLLRDSWPEDSIGNSDDFACSE+VPF Sbjct: 112 ASSVSNPFQSRLSALRRLKGLARDSDKNRSVISSHNAREILINIVFSDTGSGSSELNQEALALLVMFQLTESECASIASDSNKVIYLSKLLFHSSIEVRVNSASLIEIVVAGTRSSDLRAQISNVDEIFEGVTDLLKNLNSYPRALKISIRALFALCLVKQTRHKAVQAGAAETLIDRLADLDKCDAERALATIELLCRIPSGCSAFAAHALTVPLLVKTILKISDRATEHSAGALVALCSESEQSQRDAVSAGILTQLLLLVQSDCTDRAKRKAQTLLKLLRDSWPEDSIGNSDDFACSEVVPF 416
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A0D2PYI4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G237200 PE=4 SV=1) HSP 1 Score: 486.878 bits (1252), Expect = 1.771e-168 Identity = 256/305 (83.93%), Postives = 278/305 (91.15%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSD--TGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS VS+PF R SAL RLKGLAR+S+KNR+VI SH+ARE+L+ I+FSD +GSSELS EALAVLVMFQL ESEC IGSD NRVVYLS +LFHSSIEVR+NSASLIE VL+G RS DLRA+ICN DEIF GV DIL+NL+SYPRALRIGVRALFALCL+KQTRHKAVQAGA LIDRL DLDKC+AERALATIELLCRIPSGC AFA+HALTVPLLVKTIL+ISDRATEYAAGALMALCSESE SQ++AVSAGVLTQLLLLVQSDCT+RAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF Sbjct: 112 ASTVSNPFSVRHSALVRLKGLARESEKNRNVICSHEAREILMRILFSDVSSGSSELSQEALAVLVMFQLTESECTGIGSDSNRVVYLSELLFHSSIEVRVNSASLIETVLAGMRSSDLRAEICNVDEIFAGVTDILKNLSSYPRALRIGVRALFALCLLKQTRHKAVQAGAAETLIDRLTDLDKCDAERALATIELLCRIPSGCSAFASHALTVPLLVKTILRISDRATEYAAGALMALCSESEQSQKDAVSAGVLTQLLLLVQSDCTDRAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 416
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: B9HS21_POPTR (U-box domain-containing family protein OS=Populus trichocarpa GN=POPTR_0009s10310g PE=4 SV=1) HSP 1 Score: 464.151 bits (1193), Expect = 1.451e-159 Identity = 229/303 (75.58%), Postives = 266/303 (87.79%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A++ S+P RLSALRRL+GLARDSDKNRSVISSH+ REVL+++VFS + SS+LS E+LA+LV+F L E +C I S+P R+ YL+ +LFHSSIEVR+NSA+LIENV++GTRS DLR QI N + IFEGV++IL+N S PRAL+IG++ALFALCLVKQTRHKAV AGA LIDRLAD DKC+AERALATIELLCRI GC AFAAHALTVPLLVKTILKISDRATEYAAGAL+ALCS SE SQ+EAV AG+LTQLLLLVQSDCT+RAKRKAQMLLKLLRD+WPEDS+GNSDDF CSE+VPF Sbjct: 111 AASASNPTHSRLSALRRLRGLARDSDKNRSVISSHNVREVLVNLVFSTSQSSDLSHESLAILVLFPLTEFDCVGISSEPERISYLANLLFHSSIEVRVNSAALIENVIAGTRSSDLRLQISNTEIIFEGVIEILKNPLSSPRALKIGIKALFALCLVKQTRHKAVTAGAAETLIDRLADFDKCDAERALATIELLCRIQVGCAAFAAHALTVPLLVKTILKISDRATEYAAGALLALCSASELSQKEAVCAGILTQLLLLVQSDCTDRAKRKAQMLLKLLRDAWPEDSVGNSDDFLCSEVVPF 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A9PAR6_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 463.766 bits (1192), Expect = 1.727e-159 Identity = 229/303 (75.58%), Postives = 266/303 (87.79%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A++ S+P RLSALRRL+GLARDSDKNRSVISSH+ REVL+++VFS + SS+LS E+LA+LV+F L E +C I S+P R+ YL+ +LFHSSIEVR+NSA+LIENV++GTRS DLR QI N + IFEGV++IL+N S PRAL+IG++ALFALCLVKQTRHKAV AGA LIDRLAD DKC+AERALATIELLCRI GC AFAAHALTVPLLVKTILKISDRATEYAAGAL+ALCS SE SQ+EAV AG+LTQLLLLVQSDCT+RAKRKAQMLLKLLRD+WPEDS+GNSDDF CSE+VPF Sbjct: 111 AASASNPTHSRLSALRRLRGLARDSDKNRSVISSHNVREVLVNLVFSTSQSSDLSHESLAILVLFPLTEFDCVGISSEPERISYLANLLFHSSIEVRVNSAALIENVIAGTRSSDLRLQISNTEIIFEGVIEILKNPLSSPRALKIGIKALFALCLVKQTRHKAVTAGAAETLIDRLADFDKCDAERALATIELLCRIQVGCAAFAAHALTVPLLVKTILKISDRATEYAAGALLALCSASELSQKEAVCAGILTQLLLLVQSDCTDRAKRKAQMLLKLLRDAWPEDSVGNSDDFLCSEVVPF 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A067KJ43_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14786 PE=4 SV=1) HSP 1 Score: 462.996 bits (1190), Expect = 4.015e-159 Identity = 230/306 (75.16%), Postives = 269/306 (87.91%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVF---SDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 AS+ S+ +Q RLSALRRL+GLARDSDKNRSVISSH+AREV I++VF +D+ SS+L+ EALA+L+MF L+ES+C I SD R+ YL +LFH SIEVR+NSA+LIE V++GT+S DLRAQI + DEIFEGV+++L+N SYPRAL+IG++ALFALCLVKQTRHKAV AGA +LIDRLAD DKC+AERALATIELLCR+P+GC AFA HALTVPLLVK ILKISDRATEYAAGAL+ALC+ SE SQREAVSAG+LTQLLLLVQSDCT+RAKRKAQMLLKLLRDSWPEDS NSDDF CSE+VPF Sbjct: 111 ASSESNLYQSRLSALRRLRGLARDSDKNRSVISSHNAREVFINLVFANCTDSNSSDLNHEALALLIMFPLSESDCVCIASDSGRINYLVNLLFHISIEVRVNSAALIEIVVAGTKSSDLRAQISSVDEIFEGVIEMLKNPISYPRALKIGIKALFALCLVKQTRHKAVSAGAADILIDRLADFDKCDAERALATIELLCRVPTGCTAFAGHALTVPLLVKKILKISDRATEYAAGALLALCTSSEQSQREAVSAGILTQLLLLVQSDCTDRAKRKAQMLLKLLRDSWPEDSSANSDDFICSEVVPF 416
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: B9N4Z3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0004s14720g PE=4 SV=1) HSP 1 Score: 460.299 bits (1183), Expect = 5.120e-158 Identity = 229/303 (75.58%), Postives = 263/303 (86.80%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 A++ S+P RLSALRRL+GLARDSDKNRS+ISSH+ RE+L+++VFS + S ELS E+LA+LVMF L E +C +I SDP R+ L+ +LFHSSIEVR+NSA+LIENV++GTRS DLR QI N + IFEGV+DIL+N S PRAL+IG++ LFALCLVKQTRHKAV AGA LIDRLADLDKC+AERALATIELLCRI GC AF AHALTVPLLVKTILKISDRATEYAAGAL+ALCS SE SQ+EAV AG+LTQLLLLVQSDCT+RAKRKAQMLLKLLRDSWPEDS GNSDDF CSE+VPF Sbjct: 111 AASESNPTHSRLSALRRLRGLARDSDKNRSLISSHNVREILVNLVFSSSQSLELSHESLAILVMFPLTEFDCVAIASDPERISCLANLLFHSSIEVRVNSAALIENVIAGTRSSDLRLQISNMEIIFEGVIDILKNPLSSPRALKIGIKGLFALCLVKQTRHKAVSAGAAETLIDRLADLDKCDAERALATIELLCRIQVGCAAFVAHALTVPLLVKTILKISDRATEYAAGALLALCSASEQSQKEAVCAGILTQLLLLVQSDCTDRAKRKAQMLLKLLRDSWPEDSAGNSDDFVCSEVVPF 413
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: W9S676_9ROSA (U-box domain-containing protein 26 OS=Morus notabilis GN=L484_027509 PE=4 SV=1) HSP 1 Score: 457.988 bits (1177), Expect = 4.120e-157 Identity = 227/306 (74.18%), Postives = 273/306 (89.22%), Query Frame = 2 Query: 2 ASAVSSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS--DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE-IVPF 910 AS+ S+P RLSALRRL+GLARDSDKNRSVISS ++REVL+DIVF+ + SSELS EALAV VMF +E EC ++ S+P+RV YL+R+LFHSSI+VR+NSA++IE V++GTR+P+LR+QI N DEIFEGV++ILR+ +YPRAL++G++ALFA+CLVKQTRHKA+ AGA +LIDRLAD +KC+AERALAT+ELLCRIP+GC A AAHALTVPLLVK ILKISDRATEYAAGAL++LCS SE SQREAV+AG+LTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWPEDSI NSDDFACSE +VPF Sbjct: 111 ASSESTPAPTRLSALRRLRGLARDSDKNRSVISSLNSREVLLDIVFAGASSDSSELSREALAVAVMFPFSEIECAAVASEPDRVAYLTRLLFHSSIDVRVNSAAMIEIVVAGTRTPELRSQISNVDEIFEGVIEILRSPIAYPRALKVGIKALFAMCLVKQTRHKAIAAGAAEILIDRLADFEKCDAERALATVELLCRIPAGCSALAAHALTVPLLVKIILKISDRATEYAAGALVSLCSASEQSQREAVAAGILTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPEDSIRNSDDFACSEVVVPF 416
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: M5VJA2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006352mg PE=4 SV=1) HSP 1 Score: 430.639 bits (1106), Expect = 1.949e-146 Identity = 221/302 (73.18%), Postives = 268/302 (88.74%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGS--SELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSE-IVPF 910 S+P+ RLSALRRL+GLARD DKNRS ISS ++RE+L+ +VF+DTGS SEL+ EALA+LV+F L ES+C ++ SDP+RV YL++++ HSS+EVR+NSA+LIENVL+G+R+ +LRA+I N DEI +GVV ILRN +YPRAL+IG++ALFALCLVKQTR+KAV AGAP LI+ LAD +KC++ERALATIELLCR+P GC AFAAHALTVPLLVKTILKISDRATEYAAGAL++LCS SE SQ +AV+AGVLTQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWPEDS+GNSDDF CSE +VPF Sbjct: 115 SNPYPTRLSALRRLRGLARDLDKNRSTISSQNSREILVQLVFADTGSESSELTHEALALLVLFPLPESDCAAVASDPDRVAYLAQLVQHSSMEVRVNSAALIENVLAGSRTAELRAEISNVDEIHQGVVSILRNPIAYPRALKIGIKALFALCLVKQTRNKAVSAGAPETLINTLADFEKCDSERALATIELLCRVPDGCTAFAAHALTVPLLVKTILKISDRATEYAAGALLSLCSASEKSQNDAVAAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPEDSVGNSDDFVCSELVVPF 416
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Match: A0A0A0L6F8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G203270 PE=4 SV=1) HSP 1 Score: 422.935 bits (1086), Expect = 3.859e-143 Identity = 212/297 (71.38%), Postives = 255/297 (85.86%), Query Frame = 2 Query: 41 ALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS------DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEI-VPF 910 ALRRLKGLARDSDKNRS+ISS +ARE+L+D+VFS D+ S +LS E+LA+LVM L ESEC + SDP R+ YLS +LF SSIE RIN+A+LIE V++GTR+ +LR QIC DE+FEGVV+ILR+ +YPRAL++GV+ALFALCLVKQTRHKAV AGA ++IDR DL+K +AERALATIEL+CRIP+GC AFAAHALTVPLLVK ILKISDRATE A GAL++LCS SE ++REAV+AG+LTQLLLLVQSDCTER KRK+Q+LLKLLRDSWP++S+GNSDD+ACSEI VPF Sbjct: 128 ALRRLKGLARDSDKNRSLISSLNAREILLDVVFSNLDSGSDSFSPDLSRESLALLVMLPLTESECVLVASDPQRIGYLSHLLFDSSIEDRINAAALIETVIAGTRASELRTQICGIDELFEGVVEILRDPTAYPRALKVGVKALFALCLVKQTRHKAVSAGAAEIIIDRFPDLEKYDAERALATIELICRIPTGCDAFAAHALTVPLLVKVILKISDRATESAVGALVSLCSASEENRREAVAAGILTQLLLLVQSDCTERVKRKSQVLLKLLRDSWPQESVGNSDDYACSEIVVPF 424
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB26_ARATH (U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26 PE=2 SV=1) HSP 1 Score: 361.688 bits (927), Expect = 3.469e-121 Identity = 187/298 (62.75%), Postives = 245/298 (82.21%), Query Frame = 2 Query: 32 RLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEAL----AVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLA-DLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSIGNSDDFACSEIVPF 910 R +A+RRL+GLARDS+KNR +I+ H+ARE+L+ I+F+D ++ LS E + A+LV+ + E+ECE++ SDP+RV +++R+LF SSIE+R+N+A+LIE VL+G +S DL+ I +D IFEGV+D+L+N S RAL+IG++A+FALCLVKQTRH A+ AGAP +LIDRLA D D+C+ ER LAT+ELLCR+P GC AF HALTVPL+VKTIL++SDRATEYAAGAL+ALC+ E + EA +AG++TQLLLLVQSDCTERAKRKAQMLLKLLRDSWP+DS +SDDF SE+ PF Sbjct: 124 RAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAEERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEVAPF 421
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB25_ARATH (U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25 PE=2 SV=1) HSP 1 Score: 354.755 bits (909), Expect = 1.519e-118 Identity = 190/297 (63.97%), Postives = 239/297 (80.47%), Query Frame = 2 Query: 32 RLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNE-SECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLA-DLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPE-DSIGNSDDFAC-SEIVPF 910 R +ALRRL+G ARDSDKNR +I++H+A E+LI I+FS+T SSEL E+LA+LVM + E ++ SI SDP RV +L+R+LF SSIE R+N+A+LIE V +GT+S DL+ I N++ +FEGV+D+LRN S RAL+IG++ LFALC VK TRH A+ AGAP +LIDRLA D D+C+ ERALAT+ELLCR P GC AF HALTVPLLVKTIL++SDRATEYAAGAL+ALC+ E + EA AGV+ QLLL+VQS+CTERAK+KAQ LLKLLRDSWP+ +S NSDDF C S++VPF Sbjct: 125 RAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCSSQVVPF 421
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB23_ARATH (E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 4.787e-18 Identity = 75/290 (25.86%), Postives = 147/290 (50.69%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNR---VVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLAD----LDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMA---LCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSW 853 +S + ++ L+RL+ + ++ N+ + + E L +IV +D+ + L+ EAL +L + +E+ +++ ++ V L++++ E R+ + L++N+L D + E+F VV IL + S +A + + L +C + RHKAV+AG +++I+ L D ++ E A+ ++LLC+ G F H + ++ K IL++S A++ A L++ C+ + E + GV+ +L L++Q C + K KA+ LLKL W Sbjct: 111 ASSHENQVKCLKRLRQIVSENATNKRCLEAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVA---DPMQSMTLKPEVFTEVVQILDDRISQ-KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVLLSVGRFCA-TPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVW 395
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB31_ARATH (U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.451e-17 Identity = 84/284 (29.58%), Postives = 143/284 (50.35%), Query Frame = 2 Query: 35 LSALRRLKGLARD---SDKNRSVISSHDAREVLID--------IVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRA----LFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCS-ESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKL 838 L LR+ KG A+ S+ + V++ A++ ++D + S S + EA+A+LV +L+ S+ ++ P RV + ML SIE +IN A LI ++ RA++ ++ + G++ ++++ R R GV L ++ + KQ R+ V+ GA L+D L LD E AL ++ LC G +A T+P V+ ++K+S++ T YA L ++C SE AV G+ +LLL++QS C K+++ LLKL Sbjct: 149 LGTLRKAKGKAKVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELD-SDSKAGLMQPARVSLMVDMLNDGSIETKINCARLIGRLV---EEKGFRAELVSSHSLLVGLMRLVKD-----RRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSGCDPALKQRSAELLKL 423
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB30_ARATH (U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.978e-16 Identity = 84/283 (29.68%), Postives = 139/283 (49.12%), Query Frame = 2 Query: 35 LSALRRLKGLARD---SDKNRSVISSHDAREVLID-----IVFSDTG---SSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDIL---RNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCS-ESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKL 838 L L++ KG AR S+ + VI+ AR+ +++ ++ S G S + E +A+LV L+ S+ +S P +V + ML S E +IN A LI ++ RA++ ++ + G++ ++ R+ N ALR+ L + + KQ R V GA L+D L LD E AL ++ LC G +A A T+P V+ ++++S+ T YA L ++C E AV G+ +LLL++QS C K+++ LLKL Sbjct: 153 LGTLKKAKGQARVHALSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLD-SDSKSGLMQPAKVSLIVDMLNDGSNETKINCARLIRGLV---EEKGFRAELVSSHSLLVGLMRLVKDKRHRNGVSPALRL----LKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB22_ARATH (E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22 PE=1 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.129e-13 Identity = 54/170 (31.76%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 374 EIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAER-----ALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMA---LCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPE 859 E+F V+ IL + S+ +A R ++ L C + RHKAV+ G +M+I+ L D D +ER A+ +++LC+ G F H + ++ K IL++S +E A L++ C+ Q E + GV+ +L L++Q C + K KA+ LLKL W E Sbjct: 255 ELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMD-DTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQ-EMLQLGVVAKLCLVLQVSCGNKTKEKAKELLKLHARVWRE 421
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 6.619e-13 Identity = 83/279 (29.75%), Postives = 137/279 (49.10%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRD 847 SS + A L+ LA+ + NR VI + A +L+++++S D+ + E A+ L+ +N++ ++I +D + L +L + S E + NSA+ + S + + + +I + I +VD+L N PR + ALF L + ++ + VQ+GA LID L D ++A+A + L IP G A +PLLV+ + S R E AA AL+ L + S + G + L+ L QS T RA+ KAQ LL R+ Sbjct: 552 SSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQE---NAVTALLNLSINDNNKKAI-ADAGAIEPLIHVLENGSSEAKENSAATL---FSLSVIEENKIKIGQSGAIGP-LVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLID-LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQS-GTPRAREKAQALLSYFRN 817
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica GN=PUB12 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 5.472e-11 Identity = 81/275 (29.45%), Postives = 134/275 (48.73%), Query Frame = 2 Query: 62 LARDSDKNRSVISSHDAREVLIDIVFS-DTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL--NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPEDSI-GN 874 LA+ + NR I+ A +L++++ S D + E +V AL L + + N++ D + + + +L S+E R N+A+ + S + + + I A G + L NL + PR + A+F LC+ + + +AV+AG L++ L D + AL+ + +L P G + A + +P LV+ I S R E AA L LCS A +AGV L L ++ T+RAKRKA +L+L+ + EDS+ GN Sbjct: 350 LAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASI----VDSHAIPKIVEVLKTGSMETRENAAATL---FSLSVVDENKVTIGAA-----GAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVI-ARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLAAKAAGVEDALKELSETG-TDRAKRKASSILELMHQA-NEDSLKGN 609
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 6.803e-11 Identity = 76/278 (27.34%), Postives = 136/278 (48.92%), Query Frame = 2 Query: 14 SSPFQPRLSALRRLKGLARDSDKNRSVISSHDAREVLIDIVFSDTGSSELSVEALAVLVMFQLNESECESIGSDPNRVVYLSRMLFHSSIE-VRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNLNSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLLKLLR 844 SS + A R++ LAR+S NR VI+ +A L+ +++S + +A+ L+ +N++ +S+ ++ +V L +L +E + NSA+ + S + + + +I A I E +VD+L + + + + ALF L + + + K ++AGA L++ L D E+A+ + L + G +A +P+LV+ + S R E A AL+ LC+ S + GV+ L+ L +S T R K KAQ LLK + Sbjct: 432 SSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYST--DERIQADAVTCLLNLSINDNN-KSLIAESGAIVPLIHVLKTGYLEEAKANSAA---TLFSLSVIEEYKTEIGEAGAI-EPLVDLLGSGSLSGK--KDAATALFNLSIHHENKTKVIEAGAVRYLVE-LMDPAFGMVEKAVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSG-TARGKEKAQNLLKYFK 697
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 9.354e-11 Identity = 75/279 (26.88%), Postives = 133/279 (47.67%), Query Frame = 2 Query: 26 QP--RLSALRRLKGLARDSDKNRSVISSHDAREVLIDI--VFSDTGSSELSVEALAVLVMFQLNESE-CESIGSDPNRVVYLSRMLFHSSIEVRINSASLIENVLSGTRSPDLRAQICNADEIFEGVVDILRNL-----NSYPRALRIGVRALFALCLVKQTRHKAVQAGAPAMLIDRLADLDKCEAERALATIELLCRIPSGCLAFAAHALTVPLLVKTILKISDRATEYAAGALMALCSESEGSQREAVSAGVLTQLLLLVQSDCTERAKRKAQMLL 832 QP R SA ++ LA+ ++ NR I++ A +L+++ + +D+ + E +V ++ L + Q N+ + S G+ P V L + S+E R N+A+ + + + +++ G + L R + ALF LC+ + + KAV+AG +L+ L + + + +L+ + +L P G A A VP+LV I S R E +A L+ LCS ++ EA G++ LL+ + + T+R KRKA LL Sbjct: 368 QPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQK----GSMEARENAAATL-----------FSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGA-ADAVPVLVDFIRSGSPRNKENSAAVLVHLCSWNQQHLIEAQKLGIM-DLLIEMAENGTDRGKRKAAQLL 629 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0004217 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 15
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0004217 ID=g.arboreum_cottongen_reftransV1_0004217; Name=g.arboreum_cottongen_reftransV1_0004217; organism=Gossypium arboreum; type=contig; length=938bpback to top |