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Marker Overview
| Name | CIR_Contig00350bb-Contig1:453 |
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| Alias | Contig350bb-contig1:453
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| dbSNP ID | N/A |
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| Type | SNP |
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| SNP Alleles | T/C |
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| 5' Flanking Sequence | CTTCCTCRTTYRWTAAKGCATGTGTKGGTGCCTTYCCWGTAAGCAGTTCYAGAAGCAATA |
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| 3' Flanking Sequence | ACCRAAGCTGTARACRTCRGCYTTTTGRGAAACYTTAYKWGYATCTGTTACYTCTGGAGC |
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| Species | Gossypium spp. |
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| Germplasm | Guazuncho-2
VH8-4602
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| Source Type | cDNA |
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| Publication | [view all] |
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| Contact | Lacape, Jean Marc
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| Comment | Data obtained from CIRAD, 2014 |
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Alignments
The following features are aligned
Publications
| Year | Publication |
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| 2012 | Lacape JM, Claverie M, Vidal RO, Carazzolle MF, Guimarães Pereira GA, Ruiz M, Pré M, Llewellyn D, Al-Ghazi Y, Jacobs J, Dereeper A, Huguet S, Giband M, Lanaud C. Deep sequencing reveals differences in the transcriptional landscapes of fibers from two cultivated species of cotton. PloS one. 2012; 7(11):e48855. |
Sequence
>CIR_Contig00350bb-Contig1:453 ID=CIR_Contig00350bb-Contig1:453; Name=CIR_Contig00350bb-Contig1:453; organism=Gossypium spp.; type=genetic_marker; length=125bp
CTTCCTCRTTYRWTAAKGCATGTGTKGGTGCCTTYCCWGTAAGCAGTTCY
AGAAGCAATA[T/C]ACCRAAGCTGTARACRTCRGCYTTTTGRGAAACYT
TAYKWGYATCTGTTACYTCTGGAGC
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