UCcg11421_108, UCcg11421_108 (genetic_marker) gossypium spp

Marker Overview
NameUCD_cg11421_108
AliasUCcg11421_108
dbSNP IDN/A
TypeSNP
SNP AllelesT/A
5' Flanking SequenceGAAAGAAATCTCAAATCTCGTGTTATTTTT
3' Flanking SequenceAAAAAAAAATGAAAAGAGGTTCATAGAATA
SpeciesGossypium spp.
Source TypeEST 5' end
Primer 1cg11421_F: AAGTCCGATGTCCGGTTACA
Primer 2cg11421_R: GCCATTGAAGGTGTTCGATT
Primer 3cg11421_F: AAGTCCGATGTCCGGTTACA
Primer 4cg11421_R: GCCATTGAAGGTGTTCGATT
Publication[view all]
ContactVan Deynze, Allen
CommentPrimer data obtained in 2010
Contact
NameDetails
Van Deynze, Allen
Description:Deployment of moloecular markers in breding and breeding systems. ; Gene Flow and transgenics
First name:Allen
Last name:Van Deynze
Title:Biotechnology Specialist
Institution:University of California
Address:1 Shields Ave, Davis, CA 95616
Country:United States
Email:avandeynze@ucdavis.edu
Phone:530-754-6444
Last update:20-Feb-2007
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1TM-1 x 3-79, RIL (2012)AD_ch05_At.05N/A99.43UCcg11421_108View
2TM-1 x 3-79, RIL (2014)AD_ch05_At.05N/A101UCcg11421_108View
3TM-1 x 3-79, RIL (2012.v3)AD_ch05_At.05N/A101.03UCcg11421_108View
Sequence
>UCD_cg11421_108 ID=UCD_cg11421_108; Name=UCD_cg11421_108; organism=Gossypium spp.; type=genetic_marker; length=65bp
GAAAGAAATCTCAAATCTCGTGTTATTTTT[A/T]AAAAAAAAATGAAAA
GAGGTTCATAGAATA