NAU_RAD_A01_20011058, NAU_RAD_A01_20011058 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU_RAD_A01_20011058
Genbank IDN/A
TypeRAD
SpeciesGossypium hirsutum
Restriction EnzymeEcoR-I; Bfa-I
Publication[view all]
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D01chromosomeD01:15192619..15192912 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
A01chromosomeA01:20328982..20329282 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018215.1chromosomeCM018215.1:14960367..14960660 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018202.1chromosomeCM018202.1:18581047..18581347 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:20635127..20635427 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
Dt_chr8chromosomeDt_chr8:4296403..4296703 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Dt_chr2chromosomeDt_chr2:42786671..42786964 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D01chromosomeD01:14046907..14047200 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
A01chromosomeA01:18978057..18978357 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D01chromosomeGhir_D01:15470139..15470432 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A01chromosomeGhir_A01:19568361..19568661 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D01chromosomeD01:15137016..15137309 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A01chromosomeA01:18978397..18978697 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D01chromosomeD01:14996647..14996940 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A01chromosomeA01:19458318..19458618 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D01chromosomeD01:15363607..15363900 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
A01chromosomeA01:20049334..20049635 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D01chromosomeGbar_D01:15558706..15558999 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A01chromosomeGbar_A01:18728370..18728670 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D01chromosomeD01:15331274..15331567 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
A01chromosomeA01:18548235..18548535 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017623.1chromosomeCM017623.1:15227387..15227680 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017610.1chromosomeCM017610.1:20015076..20015376 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017649.1chromosomeCM017649.1:16023559..16023850 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017636.1chromosomeCM017636.1:19156473..19156773 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017701.1chromosomeCM017701.1:15349641..15349934 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017688.1chromosomeCM017688.1:18759970..18760270 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D01chromosomeD01:15714940..15715233 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A01chromosomeA01:19581983..19582283 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:19651328..19651628 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr01chromosomeChr01:20904254..20904554 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr01chromosomeChr01:14227948..14228241 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr02chromosomeChr02:15259752..15260045 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr02chromosomeChr02:15000227..15000520 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr02chromosomeChr02:10105386..10105679 +Gossypium gossypioides (D6) genome ISU_v1n/a
F01chromosomeF01:16868214..16868507 +Gossypium longicalyx (F1) genome NSF_v1n/a
Chr01chromosomeChr01:164322966..164323259 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
D01chromosomeNAU_RAD_A01_20011058:1..293 .
D01:14046907..14047200 +		n/a
A01chromosomeNAU_RAD_A01_20011058:1..301 .
A01:18978057..18978357 +		n/a
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Prema x 86-1, RIL (2015)AD_ch01_At.01N/A12.02A01_20011058View
Sequence
>NAU_RAD_A01_20011058 ID=NAU_RAD_A01_20011058; Name=NAU_RAD_A01_20011058; organism=Gossypium hirsutum; type=genetic_marker; length=301bp
CTACCTCTCGCTGATGAGCCATCTACTGAAGATGATGGAAAACTGGTCCC
AGGCTGCGGGAATTCAAGCAAAAGAGAGTTGCAAAACATGATTGAAAAGT
GGAAAGCTTTTGTGTCAAAAGTTGTAAAAAGGCAGAAAGTGCTAGTGAGT
CATTAGAGAGTTCGCAGAAGTCTACTTTATCGAAACTCAATTCCTCTCTG
CAAGCTCTCTTGGCCAACGCTATTGTGATTAGTTTGGGCCTTGACGAAAA
TGTTGTTGGGGCAGAGGCTAATTAGAAAGAGCTTGAAGAAAATATTTAGA
G