TMB1224, TMB1224 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB1224
AliasTMH A75-J6
Genbank IDBV679925
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source Sequencereverse_complement_BV679925.1
Source Typegenomic
Repeat Motif(GA)11
PCR ConditionAnnealing temperature: 55
Primer 1TMB1224_F: TTCATGGCATTTATCACAGCA
Primer 2TMB1224_R: GCTTTAGGAAAATTATTGGCTTTC
Product Length187
PolymorphismP_ TMB1224
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679925
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
reverse_complement_BV679925.1reverse_complement_BV679925.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch01_At.01N/A100.6TMHA75aView
2CCRI-36 x Hai-7124, F2 (2007)AD_ch15_Dt.01N/A128.8TMHA75bView
3AD-genome wide Reference Map (2009)AD_ch01_At.01N/A146tmb1224View
4TM-1 x 3-79, RIL (2012)AD_ch01_At.01N/A34.49tmb1224View
5AD-genome wide Reference Map (2009)AD_ch15_Dt.01N/A152tmb1224View
6TM-1 x 3-79, RIL (2014)AD_ch01_At.01N/A109.9tmb1224View
7CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch01_At.01N/A111.5tmb1224View
8CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch15_Dt.01N/A114tmb1224View
9LMY28 x XLZ24, RIL (2018)AD_ch01_At.01N/A44tmb1224View
10TM-1 x 3-79, RIL (2012.v3)AD_ch01_At.01N/A109.89TMB1224View
Sequence
>TMB1224 ID=TMB1224; Name=TMB1224; organism=Gossypium hirsutum; type=genetic_marker; length=187bp
TTCATGGCATTTATCACAGCATATGGAATAAAAGTCAAAAGTGATATACA
TGACAAAAGTGATATACATGACAAAAGTGATATAAATGTGAGAAGAAACN
GATTGGAAAGAACCCCAGGAAACAAAATTCAGAAGAAAAGAGAGAGAGAG
AGAGAGAGAGAAAGAAAGCCAATAATTTTCCTAAAGC