TMB1190, TMB1190 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB1190
AliasTMH A69-H6
Genbank IDBV679500
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source SequenceBV679500.1
Source Typegenomic
Repeat Motif(TA)10 + (GA)10; (TA)10+(GA)10
PCR ConditionAnnealing temperature: 55
Primer 1TMB1190_F: CTCAATGTCATTTTCCATGTCA
Primer 2TMB1190_R: CTTGCCTTAGCATTGGTCCT
Product Length221
PolymorphismP_ TMB1190
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679500
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BV679500.1BV679500.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch24_Dt.08N/A120.4TMHA69View
2TM-1 x 3-79, RIL (2012)AD_ch24_Dt.08N/A21.92tmb1190View
3AD-genome wide Reference Map (2009)AD_ch24_Dt.08N/A161tmb1190View
4Yumian-1 x 7235, RIL (2015)AD_ch24_Dt.08N/A44tmb1190View
5TM-1 x 3-79, RIL (2014)AD_ch24_Dt.08N/A25.9tmb1190View
6CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch24_Dt.08N/A73.7tmb1190View
7TM-1 x 3-79, RIL (2012.v3)AD_ch24_Dt.08N/A25.86TMB1190View
Sequence
>TMB1190 ID=TMB1190; Name=TMB1190; organism=Gossypium hirsutum; type=genetic_marker; length=221bp
CTCAATGTCATTTTCCATGTCATGTCAACTAAAACAAGCACAATATATGA
ATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGTTAACANG
TTGCTGTTGGCATTATAAAGATTAGAAAACAAAGTAACAACTTCCCAATA
TGAATGTCATGTAGTTACAGGCTGCGAGAAAAATGCCTTCAAAGTAATTC
CAGGACCAATGCTAAGGCAAG