TMB0181, TMB0181 (genetic_marker) Gossypium hirsutum

Marker Overview
NameTMB0181
AliasTMC18
Genbank IDBV679867
TypeSSR
SpeciesGossypium hirsutum
GermplasmTM-1
Source Sequencereverse_complement_BV679867.1
Source Typegenomic
Repeat Motif(CA)38
PCR ConditionAnnealing temperature: 55
Primer 1TMB0181_F: ATTACCAGACCAGATCCAGG
Primer 2TMB0181_R: GCCTGTAGGCTCTCAAACAA
Product Length227
ContactYu, John Z. (Zhi-Hong)
CommentPrimer data obtained in 2005-10
Contact
NameDetails
Yu, John Z. (Zhi-Hong)
Description:Cotton molecular genetics and genomics including integrative genome mapping and QTL identification from the Gossypium germplasm.
First name:John
Last name:Yu
Title:Research Geneticist
Institution:USDA-ARS
Address:2765 F&B Road, College Station, Texas 77845
Country:United States
Email:zyu@qutun.tamu.edu
Phone:1-979-260-9237
Fax:1-979-260-9333
Keywords:Cotton Molecular Genetics
Last update:6-Sep-2007
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBV679867
Germplasm
Stock NameType
TM-1accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
reverse_complement_BV679867.1reverse_complement_BV679867.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Handan-208 x Pima-90, F2:3 (2007)AD_ch08_At.08N/A207.6TMHC18View
2AD-genome wide Reference Map (2009)AD_ch08_At.08N/A99tmb0181View
3TM-1 x Hai-7124, BC1 (2007)AD_ch08_At.08N/A64.7TMC18-225View
4TM-1 x Hai-7124, BC1 (2008)AD_ch08_At.08N/A63.58TMC18-225View
5TM-1 x Hai-7124, BC1 (2012)AD_ch08_At.08N/A70.8TMC18-225View
Sequence
>TMB0181 ID=TMB0181; Name=TMB0181; organism=Gossypium hirsutum; type=genetic_marker; length=227bp
ATTACCAGACCAGATCCAGGGTCATTAATTATTTTAGGTCCCGCAACTTT
TGGATACTACCGAGGCTTCAGTCCTTTCAGCTATACAACCTTACAACCTT
TTATGTCATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCATCTATGCAT
TTTGATTTTGTTTGAGAGCCTACAGGC