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Marker Overview
Name | NAU2859 |
Genbank ID | CO082687 |
Type | SSR |
Species | Gossypium raimondii |
Source Type | EST |
Repeat Motif | (at)7 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2859_F: TACATTCACAAGCCCCATCT |
Primer 2 | NAU2859_R: GGAGAGCCTTAGCATGGATA |
Restriction Enzyme | NotI; EcoRV |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Publications
Year | Publication |
2007 | Guo W, Cai C, Wang C, Han Z, Song X, Wang K, Niu X, Wang C, Lu K, Shi B. A microsatellite-based, gene-rich linkage map reveals genome structure, function and evolution in Gossypium. Genetics. 2007; 176(1):527-541. |
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch17_Dt.03 | N/A | 76.47 | NAU2859 | View |
2 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch17_Dt.03 | N/A | 41.75 | NAU2859 | View |
3 | AD-genome wide Reference Map (2009) | AD_ch17_Dt.03 | N/A | 161 | NAU2859 | View |
4 | Yumian-1 x T586, RIL (2006) | AD_ch02_At.02 | N/A | 73.6 | NAU2859 | View |
5 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch02_At.02 | N/A | 23.7 | NAU2859 | View |
6 | Yumian-1 x T586, RIL (2015) | AD_ch02_At.02 | N/A | 120.5 | NAU2859 | View |
7 | Yumian-1 x 7235, RIL (2015) | AD_ch02_At.02 | N/A | 94.1 | NAU2859 | View |
8 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch17_Dt.03 | N/A | 99.1 | NAU2859 | View |
9 | 0-153 x sGK9708, RIL (2016) | AD_ch02_At.02 | N/A | 28.5 | NAU2859 | View |
10 | TM-1 x Hai-7124, BC1 (2007) | AD_ch17_Dt.03 | N/A | 13.6 | NAU2859-225 | View |
11 | TM-1 x Hai-7124, BC1 (2008) | AD_ch17_Dt.03 | N/A | 86.29 | NAU2859-225 | View |
12 | TM-1 x Hai-7124, BC1 (2012) | AD_ch17_Dt.03 | N/A | 12.3 | NAU2859-225 | View |
13 | Yumian-1 x T586, RIL (2009) | AD_ch02_At.02 | N/A | 19.6 | NAU2859/170t | View |
Sequence
>NAU2859 ID=NAU2859; Name=NAU2859; organism=Gossypium raimondii; type=genetic_marker; length=203bp TACATTCACAAGCCCCATCTATATATATATATATGTATATACATATATAT ATATATATGTTACATTAGGTTCACAACCTTATTGAAAAATACCATAACCA ATACAAATTTTTTCATCAAAACCAAACAGAACAGAGTGATTCTTGTGTAA TTTTTATGCAATTTCAAAATGAAATGTCCAACATATCCATGCTAAGGCTC TCC
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