NAU2170, NAU2170 (genetic_marker) Gossypium hirsutum

Marker Overview
NameNAU2170
Genbank IDDT047139
TypeSSR
SpeciesGossypium hirsutum
GermplasmXuzhou 142
Xuzhou 142
Source SequenceDT047139.1
Source TypeEST
Repeat MotifTCT(4)
PCR ConditionAnnealing temperature: 57
Primer 1NAU2170_F: TCAAGTCTCAACAATATGTACC
Primer 2NAU2170_R: ACTCGGCCAATGATTTGTAT
Product Length242
Publication[view all]
ContactZhang, Tian-Zhen
CommentPrimer data obtained in 2007-05
Contact
NameDetails
Zhang, Tian-Zhen
First name:Tian-Zhen
Last name:Zhang
Title:Professor
Institution:Zhejiang University
Address:College of Agriculture and Biotechnology, Zhejiang University, Hangzhou , 310058 , Zhejiang , China
Country:China
Email:cotton@zju.edu.cn
Phone:+86 571 88982971
Fax:+86 571 88982971
Keywords:cotton genetics and genomics, and breeding
Last update:18-Mar-2022
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDT047139
Germplasm
Stock NameType
Xuzhou 142accession
Xuzhou 142accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DT047139.1DT047139.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x T586, F2:7 (2008)AD_ch26_Dt.12N/A0nau2170View
2AD-genome wide Reference Map (2009)AD_ch12_At.12N/A74nau2170View
3AD-genome wide Reference Map (2009)AD_ch26_Dt.12N/A158nau2170View
4Yumian-1 x T586, RIL (2006)AD_ch26_Dt.12N/A15.7nau2170View
5Yumian-1 x T586, RIL (2015)AD_ch26_Dt.12N/A72.1nau2170View
6TM-1 x Hai-7124, BC1 (2007)AD_ch12_At.12N/A64NAU2170-250View
7TM-1 x Hai-7124, BC1 (2008)AD_ch12_At.12N/A101.05NAU2170-250View
8TM-1 x Hai-7124, BC1 (2012)AD_ch12_At.12N/A100.2NAU2170-250View
9TM-1 x Hai-7124, BC1 (2007)AD_ch26_Dt.12N/A78.1NAU2170-230View
10TM-1 x Hai-7124, BC1 (2008)AD_ch26_Dt.12N/A77.68NAU2170-230View
11TM-1 x Hai-7124, BC1 (2012)AD_ch26_Dt.12N/A80.4NAU2170-230View
12Yumian-1 x T586, RIL (2009)AD_ch26_Dt.12N/A15.7NAU2170/270y(C12,C26)View
Sequence
>NAU2170 ID=NAU2170; Name=NAU2170; organism=Gossypium hirsutum; type=genetic_marker; length=242bp
TCAAGTCTCAACAATATGTACCGGTTGATTAAAACAATTAAACTAATGGA
TTGAAAGAAAAAAAAAATGGAAAAATTAAGATGAAACAATAGAAATCAAC
TAAGAATTTTCAATCTTCTTCTTCTTCCGAAAAACAACCTCAGTATCGAG
ACCAAATGCATCAACTTTGCTCACCTCCAAAAGCTCCGATTCCTTAAACA
ACTCCACCAATGGTTGAACGCTATACAAATCATTGGCCGAGT