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Marker Overview
Name | NAU2108 |
Genbank ID | DR044192 |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | 7235 7235
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Source Sequence | DR044192.1
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Source Type | EST |
Repeat Motif | CAA(5) |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU2108_F: GGGGACTTCATCTGGTTCTA |
Primer 2 | NAU2108_R: CAGTAGGCCAAGTCTCTCGT |
Product Length | 217 |
Publication | [view all] |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Germplasm
Stock Name | Type |
7235 | accession |
7235 | accession |
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Hai-7124 x Junmian-1, BC1 (2008) part | AD_ch07_At.07 | N/A | 83.6 | NAU2108a | View |
2 | Hai-7124 x Junmian-1, BC1 (2008) part | AD_ch07_At.07 | N/A | 111.8 | NAU2108b | View |
3 | AD-genome wide Reference Map (2009) | AD_ch07_At.07 | N/A | 138 | nau2108 | View |
4 | 0-153 x sGK9708, RIL (2016) | AD_ch16_Dt.07 | N/A | 53.3 | nau2108 | View |
5 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch16_Dt.07 | N/A | 80.9 | nau2108 | View |
6 | LMY22 x LY343, RIL (2016) | chr.16 | N/A | 116.9 | nau2108 | View |
7 | LMY22 x LY343, RIL (2020) | D07 | N/A | 151.29 | nau2108 | View |
8 | TM-1 x Hai-7124, BC1 (2007) | AD_ch07_At.07 | N/A | 49.4 | NAU2108-350 | View |
9 | TM-1 x Hai-7124, BC1 (2008) | AD_ch07_At.07 | N/A | 50.43 | NAU2108-350 | View |
10 | TM-1 x Hai-7124, BC1 (2012) | AD_ch07_At.07 | N/A | 74.1 | NAU2108-350 | View |
11 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch07_At.07 | N/A | 145.5 | NAU2108 | View |
Sequence
>NAU2108 ID=NAU2108; Name=NAU2108; organism=Gossypium hirsutum; type=genetic_marker; length=217bp GGGGACTTCATCTGGTTCTAATATTAACCACCAGCATATGTCGAAGATGC TACCCCCACGCCAACAACAACAACAACAGGGAGCTTACAAACTTCGTTGT CCTTAATCTCCTTAGATCCTCACACGTCGCTAATGCCCAAGAGCCCAGAT TTAACTTGGATAACATTCATGAGTCTCCTACTGAGAGTTGCTAGCTCACG AGAGACTTGGCCTACTG
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