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Marker Overview
Name | NAU1162 |
Genbank ID | BG446140 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (CAG )6 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1162_F: CTGAGTGAGCCATGAAGTTG |
Primer 2 | NAU1162_R: TTCGGCTTCTGCTTTTACTT |
Product Length | 188 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch11_At.11 | N/A | 91 | NAU1162a | View |
2 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch11_At.11 | N/A | 91.7 | NAU1162a | View |
3 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch11_At.11 | N/A | 96.7 | NAU1162b | View |
4 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch21_Dt.11 | N/A | 168.4 | NAU1162b | View |
5 | AD-genome wide Reference Map (2009) | AD_ch11_At.11 | N/A | 205 | NAU1162 | View |
6 | JLZM x ZJXSLS, F2 (2008) | A_JZ_A11 | N/A | 216.6 | NAU1162 | View |
7 | Yumian-1 x T586, RIL (2006) | AD_ch11_At.11 | N/A | 96 | NAU1162 | View |
8 | PD6992 x SM3, F2:3 (2005) | AD_ch11_At.11 | N/A | 3.4 | NAU1162 | View |
9 | Yumian-1 x T586, RIL (2015) | AD_ch11_At.11 | N/A | 33.1 | NAU1162 | View |
10 | Yumian-1 x 7235, RIL (2015) | AD_ch11_At.11 | N/A | 26.2 | NAU1162 | View |
11 | TM-1 x Hai-7124, BC1 (2007) | AD_ch11_At.11 | N/A | 101.2 | NAU1162-300 | View |
12 | TM-1 x Hai-7124, BC1 (2008) | AD_ch11_At.11 | N/A | 99.95 | NAU1162-300 | View |
13 | TM-1 x Hai-7124, BC1 (2012) | AD_ch11_At.11 | N/A | 62.3 | NAU1162-300 | View |
14 | Yumian-1 x T586, RIL (2009) | AD_ch11_At.11 | N/A | 95.4 | NAU1162/190t(C11) | View |
15 | TM-1 x Hai-7124, BC1S1 (2007) | AD_ch11_At.11 | N/A | 65.5 | NAU1162_300 | View |
16 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch11_At.11 | N/A | 71.97 | NAU1162 | View |
17 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch21_Dt.11 | N/A | 63.66 | NAU1162 | View |
18 | PD 94042 x (AD)4-08, F2 (2016) | AD_ch11_At.11 | N/A | 165.3 | NAU1162 | View |
Sequence
>NAU1162 ID=NAU1162; Name=NAU1162; organism=Gossypium arboreum; type=genetic_marker; length=188bp CTGAGTGAGCCATGAAGTTGATGAAAAAAGAAGAAGAGACTCCTAAGGAA ACGGTATCATAGCCAGTTGCCGAGGAGTCCAAGGAGTCCAAGGAGACTTC TGAGCCAACAGTTGAAGAAACCAAAGAAAGCACAGAGTCTACAGAAGCAT CAGCAGCAGCAGCAGCAGAAGTAAAAGCAGAAGCCGAA
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