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Marker Overview
Name | NAU1085 |
Genbank ID | BQ401402 |
Type | SSR |
Species | Gossypium arboreum |
Germplasm | AKA 8400 AKA 8400
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Source Type | EST |
Repeat Motif | (CAATCC)3 |
PCR Condition | Annealing temperature: 57 |
Primer 1 | NAU1085_F: AGTCGCCCCTTCTCTAATTT |
Primer 2 | NAU1085_R: TGTAAACCGAACTCGTTGTG |
Product Length | 240 |
Restriction Enzyme | EcoRI; XhoI |
Contact | Zhang, Tian-Zhen
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Comment | Primer data obtained in 2007-05 |
Cross References
External references for this genetic_marker
Alignments
The following features are aligned
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Yumian-1 x T586, RIL (2006) | AD_ch07_At.07 | N/A | 48.9 | NAU1085 | View |
2 | (YM1 x CCRI35) x (YM1 x 7235), 4WC (2012) | AD_ch07_At.07 | N/A | 93.5 | NAU1085 | View |
3 | Yumian-1 x T586, RIL (2015) | AD_ch07_At.07 | N/A | 76.8 | NAU1085 | View |
4 | Yumian-1 x 7235, RIL (2015) | AD_ch07_At.07 | N/A | 73 | NAU1085 | View |
5 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch07_At.07 | N/A | 56.6 | NAU1085 | View |
6 | 0-153 x sGK9708, RIL (2016) | AD_ch07_At.07 | N/A | 38.6 | NAU1085 | View |
7 | CCRI-35 x Yumian-1, RIL (2015) | AD_ch07_At.07 | N/A | 80.6 | NAU1085 | View |
8 | 0-153 x sGK9708, RIL (2017) | AD_ch07_At.07 | N/A | 70.84 | NAU1085 | View |
9 | LMY28 x XLZ24, RIL (2018) | AD_ch07_At.07 | N/A | 30.6 | NAU1085 | View |
10 | 901-001 x sGK156, F2 (2019) | AD_ch07_At.07 | N/A | 0 | NAU1085 | View |
11 | Yumian-1 x T586, RIL (2009) | AD_ch07_At.07 | N/A | 48.8 | NAU1085/250t | View |
12 | CCRI-35 x Yumian-1, RIL (2017) | AD_ch07_At.07 | N/A | 44.18 | NAU1085 | View |
Sequence
>NAU1085 ID=NAU1085; Name=NAU1085; organism=Gossypium arboreum; type=genetic_marker; length=240bp AGTCGCCCCTTCTCTAATTTCATCTGATCGATCAGTTCTTTAAGCTTCAC AATCCCAATCCCAATCCCATGCTTCTTTCCCTTTTCTCCTAATATTTTTT CCCGGGAAAACTGTAGAATCCTAGACATTTCTTTGTTTGGAAGAAGTCAA ATAAGAATCGAGGAGGAGAAAGGAGGAGGAGGAGCTGTAGATAGAAGATT TGTGAAAAAATGGCCTCGACCACAACGAGTTCGGTTTACA
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