MUSB0894, MUSB0894 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0894
Genbank IDDX525531
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX525531.2
Source TypeEST
Repeat Motif(TTC)5
PCR ConditionAnnealing temperature: 50
Primer 1MUSB0894_F: CCCAAGAGGTAACGTTCCTCC
Primer 2MUSB0894_R: CCAATGCGAAAACCCACAAAGG
Product Length225
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0894
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX525531
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX525531.2DX525531.2Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1AD-genome wide Reference Map (2009)AD_ch06_At.06N/A81musb0894View
2TM-1 x 3-79, RIL (2006)AD_ch06_At.06N/A26.5musb0894View
3TM-1 x 3-79, RIL (2012)AD_ch06_At.06N/A52.37musb0894View
4TM-1 x 3-79, RIL (2014)AD_ch06_At.06N/A52.4musb0894View
5TM-1 x 3-79, RIL (2012.v3)AD_ch06_At.06N/A52.37MUSB0894View
Sequence
>MUSB0894 ID=MUSB0894; Name=MUSB0894; organism=Gossypium hirsutum; type=genetic_marker; length=225bp
CCCAAGAGGTAACGTTCCTCCTTATTGTTAATTCTGAAAGGACAAGACTA
CCACATGCCCCTTCTTCGATCAAAATTTAAGCCTCCCATTTTTGGGTTTT
CAACTCAAAATCCTTTTGGTCTCAAGGTGCCCTTTGTGGTTTTCACCTTG
GCCTCTCTATTTTTCTTCTTCTTCTTCGTTTCTCTTAGAAGGTCTCAAAG
CACCCTTTGTGGGTTTTCGCATTGG