MUSB0640, MUSB0640 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0640
Genbank IDDX822943
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822943.1
Source TypeEST
Repeat Motif(TTAA)3
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0640_F: AACACCTCAGCGACTTCACTT
Primer 2MUSB0640_R: CGAGTCAATGTGATTTGGAAAG
Product Length317
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0640
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822943
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822943.1DX822943.1Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x T586, RIL (2006)AD_ch08_At.08N/A6.2MUSB0640View
2(YM1 x CCRI35) x (YM1 x 7235), 4WC (2012)AD_ch08_At.08N/A20.4MUSB0640View
3Yumian-1 x T586, RIL (2015)AD_ch08_At.08N/A41.5MUSB0640View
4Yumian-1 x 7235, RIL (2015)AD_ch08_At.08N/A61.1MUSB0640View
5Yumian-1 x T586, RIL (2009)AD_ch08_At.08N/A17MUSB0640/330yView
Sequence
>MUSB0640 ID=MUSB0640; Name=MUSB0640; organism=Gossypium hirsutum; type=genetic_marker; length=317bp
AACACCTCAGCGACTTCACTTAGGCCTAATTACTCTTTAAGTCTTACCCA
TTTACCATTTAAGCCATTTAATCACTATTTGTTTTAATTAACAAGTTTTG
CACCTTTTTCAATTTAGTCCTTTTTAATTAATTAACTATCAAAACGTTAA
AATTTTCTAACGGAACTTTAATACTACCTTAATGACACACCATAAATATT
TACAGCTCGGTTTATAGAAACGAGGTCTCAATACCTCATTTTCTNAACCG
CTTTGACTAATAAATCTTATAAAACACAAATCACTAATGCAAAATCTTTC
CAAATCACATTGACTCG