MUSB0551, MUSB0551 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0551
Genbank IDDX822860
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX822860
Source TypeEST
Repeat Motif(TTA)4
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0551_F: GTCCATAAGAGGTAACGAACAAGC
Primer 2MUSB0551_R: GTACATCCACTATCAACATGAATGG
Product Length360
Restriction EnzymeHindIII; NotI
PolymorphismP_ MUSB0551
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX822860
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX822860DX822860Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Yumian-1 x 7235, RIL (2015)AD_ch18_Dt.13N/A27.3MUSB0551View
2CCRI-35 x Yumian-1, RIL (2015)AD_ch18_Dt.13N/A45.8MUSB0551View
3CCRI-35 x Yumian-1, RIL (2017)AD_ch18_Dt.13N/A60.11MUSB0551View
Sequence
>MUSB0551 ID=MUSB0551; Name=MUSB0551; organism=Gossypium hirsutum; type=genetic_marker; length=360bp
GTCCATAAGAGGTAACGAACAAGCCAACATTGGTTATGATATGTCACATC
CTCGTTGGTTAGNCTGACTTGTACCAGCTTGTTTTCAATGAAATTGGAAT
AGTGATTTTGATACTATAAATTCAAAGTCACAAAATTTATTTTATTATTA
TTATTTTATTTCCTAAAATATGATAGAAATATCGTATAAAAATTTTGTTA
AGATATTTTACCGTTTACATGCTCAATTTGATAAAAAGGACTAAATTGCA
TAAAGTGCAAAAGTTGTGTTCTAGTAGCTAAATGTATTAAATAGCTATAG
AACCTTAAAGTATGAGTCCTTATGTTGTAATTAGACCATTCATGTTGATA
GTGGATGTAC