MUSB0139, MUSB0139 (genetic_marker) Gossypium hirsutum

Marker Overview
NameMUSB0139
Genbank IDDX560504
TypeSSR
SpeciesGossypium hirsutum
GermplasmAcala Maxxa
Source SequenceDX560504
Source TypeEST
Repeat Motif(CTT)6
PCR ConditionAnnealing temperature: 55
Primer 1MUSB0139_F: ATGCAGCATGCAAATGTCC
Primer 2MUSB0139_R: GGCGGAGAGAGTAGAGAACG
Product Length225
Restriction EnzymeHindIII; NotI
Publication[view all]
CommentPrimer data obtained in 2006
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankDX560504
Germplasm
Stock NameType
Acala Maxxaaccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
DX560504DX560504Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Guazuncho-2 x VH8-4602, consensus (2009)AD_ch08_At.08N/A124.06MUSB0139View
2Guazuncho-2 x VH8-4602, RIL (2009)AD_ch08_At.08N/A48.76MUSB0139View
3TM-1 x 3-79, RIL (2006)AD_ch07_At.07N/A0MUSB0139aView
4TM-1 x 3-79, RIL (2006)AD_ch07_At.07N/A28.7MUSB0139bView
5TM-1 x 3-79, RIL (2012)AD_ch07_At.07N/A102.32MUSB0139cView
6TM-1 x 3-79, RIL (2014)AD_ch07_At.07N/A35.4MUSB0139cView
7TM-1 x 3-79, RIL (2012.v3)AD_ch07_At.07N/A35.42MUSB0139cView
Sequence
>MUSB0139 ID=MUSB0139; Name=MUSB0139; organism=Gossypium hirsutum; type=genetic_marker; length=225bp
ATGCAGCATGCAAATGTCCATGTTGTATTTCAGTCATTGAACTTTTGTAA
CATGTGACTTATGTTTGTTTTAATTGTAACTTCTTCTTCTTCTTCTTTTT
TGCCGAGGTTCAGCCATGTACTTAGTAGATTTAGTAAGGTTTAGGTTATC
ATTANNACTGCACTACACCTCGCCACCTGCCCCACCCACGTTCCTTCCTC
TCCCACGTTCTCTACTCTCTCCGCC