CGR6017, CGR6017 (genetic_marker) Gossypium hirsutum

Marker Overview
NameCGR6017
Genbank IDGQ393870
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 33 B
Source SequenceMONCS0835
Source Typegenomic
PCR ConditionAnnealing temperature: 55
Primer 1CGR6017_F: CCGCTTTCTTAATCGCATCT
Primer 2CGR6017_R: GCTTCCGGTCAGTTCTGTTT
Publication[view all]
ContactMonsanto
CommentPrimer data obtained in 2009-05
Contact
NameDetails
Monsanto
Country:United States
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankGQ393870
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D10_02chromosomeD10_02:46842270..46842557 +
Chr03chromosomeChr03:46157765..46158023 +
chr03chromosomechr03:31249453..31249761 +
Germplasm
Stock NameType
Deltapine 33 Baccession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
MONCS0835MONCS0835Gossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1GX1135 x GX100-2, F2 (2013)AD_ch03_At.03N/A57.6CGR6017View
2GX1135 x GX100-2, RIL (2016)AD_ch17_Dt.03N/A14.3CGR6017View
3CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch17_Dt.03N/A33.1CGR6017View
4CCRI-35 x Yumian-1, RIL (2015)AD_ch17_Dt.03N/A61.2CGR6017View
5Monsanto SSR Bin Map, (2009)AD_ch17_Dt.03N/A21CGR6017View
6CCRI-35 x Yumian-1, RIL (2017)AD_ch17_Dt.03N/A84.91CGR6017View
Sequence
>CGR6017 ID=CGR6017; Name=CGR6017; organism=Gossypium hirsutum; type=genetic_marker; length=128bp
CCGCTTTCTTAATCGCATCTTTCTTCGCTTTCTCTGTCCCGATCAATTCC
TTTAAACTAATTAATTAATTACTTAATTAACACACACACACACACACACA
AAAAAAAAAAACAGAACTGACCGGAAGC