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Marker Overview
Name | BNL3860 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL3860_orig
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Source Type | genomic |
Repeat Motif | (TG)11 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL3860_F: GAGGAATTGAGCATTGGGAA |
Primer 2 | BNL3860_R: TGCTGCACATCATGAATGAA |
Polymorphism | P_ BNL3860 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Guazuncho-2 x VH8-4602, BC1 (2005) | AD_ch24_Dt.08 | N/A | 39 | BNL3860 | View |
2 | Guazuncho-2 x VH8-4602, BC2 (2005) | AD_ch24_Dt.08 | N/A | 0 | BNL3860 | View |
3 | Guazuncho-2 x VH8-4602, consensus (2009) | AD_ch24_Dt.08 | N/A | 27.29 | BNL3860 | View |
4 | Guazuncho-2 x VH8-4602, RIL (2009) | AD_ch24_Dt.08 | N/A | 18.59 | BNL3860 | View |
5 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch24_Dt.08 | N/A | 31 | BNL3860 | View |
6 | Palmeri x K-101, F2 (2007) | AD_ch24_Dt.08 | N/A | 44.5 | BNL3860 | View |
7 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_ch24_Dt.08 | N/A | 171.4 | BNL3860 | View |
8 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch24_Dt.08 | N/A | 170.3 | BNL3860 | View |
9 | AD-genome wide Reference Map (2009) | AD_ch24_Dt.08 | N/A | 170 | BNL3860 | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch24_Dt.08 | N/A | 110.6 | BNL3860 | View |
11 | Monsanto SSR Bin Map, (2009) | AD_ch24_Dt.08 | N/A | 21 | BNL3860 | View |
12 | TM-1 x Hai-7124, BC1 (2008) | AD_ch24_Dt.08 | N/A | 56.99 | BNL3860-190 | View |
13 | TM-1 x Hai-7124, BC1 (2007) | AD_ch24_Dt.08 | N/A | 52.6 | BNL3860-190 | View |
14 | Vsg x (TM-1 x Hai-7124), DH (2005) | AD_ch24_Dt.08 | N/A | 10.9 | BNL3860-190 | View |
15 | TM-1 x Hai-7124, BC1 (2012) | AD_ch24_Dt.08 | N/A | 109.8 | BNL3860-190 | View |
16 | TM-1 x Hai-7124, BC1S1 (2007) | AD_ch24_Dt.08 | N/A | 48.7 | BNL3860_190 | View |
Sequence
>BNL3860 ID=BNL3860; Name=BNL3860; organism=Gossypium hirsutum; type=genetic_marker; length=190bp GAGGAATTGAGCATTGGGAAAATCAAGTTTAAAGCTTTTGATTTGGGAGG CCATCAGATTGCTCGAAGAGTTTGGAAAGATTACTACGCCAAGGTACATT TCTTTTACCTACAAATCTATCTGATTAGTTGCAATTTGATATGTGTGTGT GTGTGTGTGTGTGTTTGGTGTTCATTCATGATGTGCAGCA
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