BNL3790, BNL3790 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL3790
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL3790_orig
Source Typegenomic
Repeat Motif(AT)11+(GT)16
PCR ConditionAnnealing temperature: 55
Primer 1BNL3790_F: TTCAGAATGTGTTAGACTAGCTGG
Primer 2BNL3790_R: AAAGAAGGAAGTGTGGGCAG
PolymorphismP_ BNL3790
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3790_origBNL3790_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch10_At.10N/A52.8BNL3790View
2Emian-22 x 3-79, BC1 (2011)AD_ch10_At.10N/A69.28BNL3790View
3Handan-208 x Pima-90, F2:3 (2007)AD_ch10_At.10N/A149.1BNL3790View
4Xinluzao-1 x Hai-7124, F2 (2008)AD_ch10_At.10N/A92.3BNL3790View
5AD-genome wide Reference Map (2009)AD_ch10_At.10N/A197BNL3790View
6SG 747 x Giza 75, BIL (2013)AD_ch10_At.10N/A42.3BNL3790View
7Monsanto SSR Bin Map, (2009)AD_ch10_At.10N/A41BNL3790View
8HS-46 x MARCABUCAG8US-1-88, RIL (2009)AD_ch10_At.10N/A18BNL3790-163View
9PD 94042 x (AD)4-08, F2 (2016)AD_ch10_At.10N/A107.2BNL3790View
Sequence
>BNL3790 ID=BNL3790; Name=BNL3790; organism=Gossypium hirsutum; type=genetic_marker; length=162bp
TTCAGAATGTGTTAGACTAGCTGGTAGATCAAATTGTAATAAATCACCAA
AATTGGATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGGCTTAGCCATGAGAATTAATAGATAATTAAACTGCCCAC
ACTTCCTTCTTT