BNL3413, BNL3413 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL3413
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL3413_orig
Source Typegenomic
Repeat Motif(CA)11+(CT)11
PCR ConditionAnnealing temperature: 55
Primer 1BNL3413_F: AGAGAGGATATACACAAACGTGC
Primer 2BNL3413_R: TAAGGAGGAAGAGTGGCGAA
PolymorphismP_ BNL3413
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90accession
Relationships

The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3413_origBNL3413_origGossypium hirsutumsequence_feature


Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)AD_ch02_At.02N/A58.1BNL3413View
2Guazuncho-2 x VH8-4602, consensus (2009)AD_ch02_At.02N/A43.27BNL3413View
3Guazuncho-2 x VH8-4602, RIL (2009)AD_ch02_At.02N/A34.96BNL3413View
4AD-genome wide Reference Map (2009)AD_ch17_Dt.03N/A76BNL3413View
5Xinluzao-1 x Hai-7124, F2 (2008)AD_ch02_At.02N/A109.2BNL3413View
6AD-genome wide Reference Map (2009)AD_ch02_At.02N/A134BNL3413View
7CCRI 12-4 x (AD)5-7, F2 (2015)AD_ch02_At.02N/A93.4BNL3413View
8Monsanto SSR Bin Map, (2009)AD_ch02_At.02N/A61BNL3413View
9LMY22 x LY343, RIL (2016)chr.2N/A56.4BNL3413View
10Handan-208 x Pima-90, F2:3 (2007)AD_ch17_Dt.03N/A142.7BNL3413aView
11TM-1 x Hai-7124, BC1 (2008)AD_ch02_At.02N/A51.77BNL3413-190View
12TM-1 x Hai-7124, BC1 (2012)AD_ch02_At.02N/A48.7BNL3413-190View
Sequence
>BNL3413 ID=BNL3413; Name=BNL3413; organism=Gossypium hirsutum; type=genetic_marker; length=180bp
AGAGAGGATATACACAAACGTGCACACACACACACACACACACACTCTCT
CTCTCTCTCTCTCTCTCACTCACTCACTCACACACACACTCTCTCTCTCT
CTCTCCCTCTCTCTCTTCTTGACGACTTTTCATTTTCACTGGGTGAACCG
ACCTCCTACTTTCGCCACTCTTCCTCCTTA