BNL3085, BNL3085 (genetic_marker) Gossypium hirsutum

Marker Overview
NameBNL3085
Genbank IDN/A
TypeSSR
SpeciesGossypium hirsutum
GermplasmDeltapine 90
Source SequenceBNL3085_orig
Source Typegenomic
Repeat Motif(AG)15
PCR ConditionAnnealing temperature: 55
Primer 1BNL3085_F: TGGACATCCTTCTGGAAACC
Primer 2BNL3085_R: TGTGGAGTCATCAATATGTTGC
PolymorphismP_ BNL3085
CommentPrimer data obtained in 2000
Germplasm
Stock NameType
Deltapine 90obsolete_cultivar
Relationships

This genetic_marker is adjacent to the following primer feature(s):

Feature NameUnique NameSpeciesType
BNL3085_FBNL3085_FGossypium hirsutumprimer
BNL3085_RBNL3085_RGossypium hirsutumprimer


The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3085aBNL3085aGossypium hirsutummarker_locus
BNL3085bBNL3085bGossypium hirsutummarker_locus
BNL3085-104BNL3085-104Gossypium hirsutummarker_locus
BNL3085BNL3085Gossypium hirsutummarker_locus
BNL3085-2BNL3085-2Gossypium hirsutummarker_locus
BNL3085-1BNL3085-1Gossypium hirsutummarker_locus


The following sequence_feature feature(s) derives from this genetic_marker:

Feature NameUnique NameSpeciesType
BNL3085_origBNL3085_origGossypium hirsutumsequence_feature


Sequence
>BNL3085 ID=BNL3085|Name=BNL3085|organism=Gossypium hirsutum|type=genetic_marker|length=110bp
TGGACATCCTTCTGGAAACCTCAAGTTGCCTTCTAAAATCATTCTCTATG
TAAAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATGCAACATATTGA
TGACTCCACA
Map Positions
#Map NameLinkage GroupBinChromosomePositionLocusMapViewer
1CCRI-36 x Hai-7124, F2 (2007)CCRI-36 x Hai-7124, F2 (2007).CH-F2_chr01N/AAD_chr.0180.7BNL3085aView
2CCRI-36 x Hai-7124, F2 (2007)CCRI-36 x Hai-7124, F2 (2007).CH-F2_chr15N/AAD_chr.15103.4BNL3085bView
3HS-46 x MARCABUCAG8US-1-88, RIL (2009)HS-46 x MARCABUCAG8US-1-88, RIL (2009).HSM-RIL_chr01N/AAD_chr.015BNL3085-104View
4Monsanto SSR Bin Map, (2009)Monsanto SSR Bin Map, (2009).BIN-SSR_chr01N/AAD_chr.01110BNL3085View
5AD-genome wide Reference Map (2009)AD-genome wide Reference Map (2009).Ref-chr01N/AAD_chr.0198BNL3085View
6AD-genome wide Reference Map (2009)AD-genome wide Reference Map (2009).Ref-chr15N/AAD_chr.15172BNL3085View
7W10 x TM-1, F2:3 (2015)WT-F2:3_chr01-1N/AAD_chr.0147.2BNL3085View
8CCRI 12-4 x (AD)5-7, F2 (2015)CAD5-F2_chr01N/AAt.0195.3BNL3085View
9Xinluzao-1 x Hai-7124, F2 (2008)Xinluzao-1 x Hai-7124, F2 (2008).XH-F2_lg20/chr15N/AAD_chr.1517.3BNL3085-2View
10Xinluzao-1 x Hai-7124, F2 (2008)Xinluzao-1 x Hai-7124, F2 (2008).XH-F2_lg23/chr01N/AAD_chr.0126.4BNL3085-1View