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Marker Overview
| Name | BNL3020 |
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| Genbank ID | N/A |
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| Type | SSR |
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| Species | Gossypium hirsutum |
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| Germplasm | Deltapine 90 |
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| Source Sequence | BNL3020_orig
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| Source Type | genomic |
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| Repeat Motif | (AG)12 |
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| PCR Condition | Annealing temperature: 55 |
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| Primer 1 | BNL3020_F: GATAGACTAAGGGACATATCTTCTGC |
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| Primer 2 | BNL3020_R: TTCCTGACGCCTTCTTTCAT |
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| Comment | Primer data obtained in 2000 |
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Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
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| 1 | Emian-22 x 3-79, BC1 (2011) | AD_ch05_At.05 | N/A | 65.97 | BNL3020 | View |
| 2 | TM-1 x 3-79, RIL (2006) | AD_ch19_Dt.05 | N/A | 43.6 | BNL3020 | View |
| 3 | TM-1 x 3-79, RIL (2012) | AD_ch19_Dt.05 | N/A | 25.26 | BNL3020 | View |
| 4 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 310 | BNL3020 | View |
| 5 | TM-1 x 3-79, RIL (2014) | AD_ch19_Dt.05 | N/A | 150.8 | BNL3020 | View |
| 6 | Emian-22 x 3-79, BC1 (2015) | AD_ch05_At.05 | N/A | 62.6 | BNL3020 | View |
| 7 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch19_Dt.05 | N/A | 166.9 | BNL3020b* | View |
| 8 | TM-1 x Hai-7124, BC1 (2008) | AD_ch05_At.05 | N/A | 39.13 | BNL3020-205 | View |
| 9 | TM-1 x Hai-7124, BC1 (2012) | AD_ch05_At.05 | N/A | 170.4 | BNL3020-205 | View |
| 10 | TM-1 x Hai-7124, BC1 (2008) | AD_ch19_Dt.05 | N/A | 31.96 | BNL3020-210 | View |
| 11 | TM-1 x Hai-7124, BC1 (2012) | AD_ch19_Dt.05 | N/A | 157.9 | BNL3020-210 | View |
| 12 | TM-1 x 3-79, RIL (2012.v3) | AD_ch19_Dt.05 | N/A | 150.82 | BNL3020 | View |
Sequence
>BNL3020 ID=BNL3020; Name=BNL3020; organism=Gossypium hirsutum; type=genetic_marker; length=181bp
GATAGACTAAGGGACATATCTTCTGCATATTAGATGAGGATACAAAGTGG
AATGGTTTAAACTTGTTTTAAAGAAATTAACCGTACGAGAGAAAGAGAGA
GAGAGAGAGAGAGAGAGTAAAGGAGTTGTTTAGATATTTGCTATACTTAT
GCTTAATATTCATGAAAGAAGGCGTCAGGAA
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