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Marker Overview
Name | BNL2709 |
Genbank ID | N/A |
Type | SSR |
Species | Gossypium hirsutum |
Germplasm | Deltapine 90 |
Source Sequence | BNL2709_orig
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Source Type | genomic |
Repeat Motif | (AG)26 |
PCR Condition | Annealing temperature: 55 |
Primer 1 | BNL2709_F: AGTGGACAAACAATCTTTTTGG |
Primer 2 | BNL2709_R: ACATAAGGAAAGGAACAAGAAGC |
Polymorphism | P_ BNL2709 |
Comment | Primer data obtained in 2000 |
Alignments
The following features are aligned
Relationships
The following sequence_feature feature(s) derives from this genetic_marker:
Map Positions
# | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
1 | Emian-22 x 3-79, BC1 (2011) | AD_ch12_At.12 | N/A | 123.27 | BNL2709 | View |
2 | TM-1 x 3-79, RIL (2006) | AD_ch12_At.12 | N/A | 31.4 | BNL2709 | View |
3 | TM-1 x 3-79, RIL (2012) | AD_ch12_At.12 | N/A | 80.82 | BNL2709 | View |
4 | Xinluzao-1 x Hai-7124, F2 (2008) | AD_chU | N/A | 44.1 | BNL2709 | View |
5 | CCRI-36 x Hai-7124, F2 (2007) | AD_ch12_At.12 | N/A | 99.3 | BNL2709 | View |
6 | AD-genome wide Reference Map (2009) | AD_ch12_At.12 | N/A | 93 | BNL2709 | View |
7 | TM-1 x 3-79, RIL (2014) | AD_ch12_At.12 | N/A | 80.8 | BNL2709 | View |
8 | TM-1 x (TX-0256 + TX-1046), CSIL (2016) | AD_ch12_At.12 | N/A | 85.5 | BNL2709 | View |
9 | Emian-22 x 3-79, BC1 (2015) | AD_ch12_At.12 | N/A | 101.4 | BNL2709 | View |
10 | CCRI 12-4 x (AD)5-7, F2 (2015) | AD_ch12_At.12 | N/A | 96.6 | BNL2709 | View |
11 | SG 747 x Giza 75, BIL (2013) | AD_ch12_At.12 | N/A | 98.6 | BNL2709 | View |
12 | Monsanto SSR Bin Map, (2009) | AD_ch12_At.12 | N/A | 41 | BNL2709 | View |
13 | Handan-208 x Pima-90, F2:3 (2007) | AD_ch22_Dt.04 | N/A | 62.3 | BNL2709* | View |
14 | TM-1 x 3-79, RIL (2012.v3) | AD_ch12_At.12 | N/A | 80.82 | BNL2709 | View |
Sequence
>BNL2709 ID=BNL2709; Name=BNL2709; organism=Gossypium hirsutum; type=genetic_marker; length=141bp AGTGGACAAACAATCTTTTTGGAGAGATTTTTTTCTTAGAAAAAAGAGAG AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGAG AAGATATCNTGTAAAATAGCTTCTTGTTCCTTTCCTTATGT
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